Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0930 ATGAGCTTCCAAGATGTTCAAGTTCGTACCCACCACCAAAAACAATCACTTCTCTCCAATGCAAAGCAAGACCCATCTCAAGCTGTTGCTGCTGGAATTTTTCAAATAAACACAGCCGTTTCCTCATTCCATCGCCTCATTAATACACTTGGCACTCCTAAAGATACCCTTGAACTCCGCGATAGAGTAAATAAGACAAGGATACATATTGCACAGTTGGTAAAAGATACTTCTGCTAAATTAAAACAAGCTAGTGAAACAGACCTGTACACAGAAGTTAGTGCAACCAAGAAGATTTCAGATGCTAAACTTGCCAAGGATTTCCAGTCAGTTCTTAAAGAATTTCAAAAGGCTCAAAGGCTTGCAGTTGAGAGGGAAACAACATATGCTCCCTTTGTTCCTAAAGAGGTCCTTCCATCTAGTTATTCTGTGCAAGAGCTAGAGATAAGTTCATCGCAAAGTCAAGAACAACAAACTCTTCTCTTCGAATCTAAAAGAGAAGAGGTGATACTTGTGGACAATGAAATTCAATTCAATGAAGCTATCATTGAAGAAAGAGAACAAGGTATCCAAGAAATTCAGAACCAAATCATTGAAGTAAATGAGATTTTTAAAGATCTAGCTGTATTGGTGCAAGAACAAGGAATTACTATTGATAATATTGATTCTAACATTGAGAGCTCCCATGCTGCGACAACACAAGCTACGTCCCATCTTGTAAAAGCAAAGAAAACCCAAAAAACTGGTTCATCTCTGGCCGGTCATTCCGTAGGAATAACAAATGGCTTATTACACAAGGGACATTTTGCAAAAAGGAGTGTGTGCACATCTGTTTGCGTTTCACTTTGA 849 38.63 MSFQDVQVRTHHQKQSLLSNAKQDPSQAVAAGIFQINTAVSSFHRLINTLGTPKDTLELRDRVNKTRIHIAQLVKDTSAKLKQASETDLYTEVSATKKISDAKLAKDFQSVLKEFQKAQRLAVERETTYAPFVPKEVLPSSYSVQELEISSSQSQEQQTLLFESKREEVILVDNEIQFNEAIIEEREQGIQEIQNQIIEVNEIFKDLAVLVQEQGITIDNIDSNIESSHAATTQATSHLVKAKKTQKTGSSLAGHSVGITNGLLHKGHFAKRSVCTSVCVSL 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7509045 7514019 + Conep14aG0095000.1 Cone14ag0930 452779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0930 282 Pfam SNARE domain 218 251 IPR000727 -
Cone14ag0930 282 SUPERFAMILY t-snare proteins 23 235 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Cone14ag0930 282 SMART SynN_4 13 127 IPR006011 GO:0016020(InterPro)
Cone14ag0930 282 ProSitePatterns Syntaxin / epimorphin family signature. 186 225 IPR006012 GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro)
Cone14ag0930 282 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020(InterPro)
Cone14ag0930 282 MobiDBLite consensus disorder prediction 1 22 - -
Cone14ag0930 282 SMART tSNARE_6 175 242 IPR000727 -
Cone14ag0930 282 CDD SNARE_Qa 183 241 - -
Cone14ag0930 282 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 242 IPR000727 -
Cone14ag0930 282 PANTHER SYNTAXIN 34 248 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Cone14ag0930 282 FunFam Syntaxin-22 like 20 133 - -
Cone14ag0930 282 Gene3D - 181 243 - -
Cone14ag0930 282 Gene3D - 3 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0930 Cone-Chr14:7509045 Cone8ag0484 Cone-Chr8:3325737 5.86E-106 dispersed
Cone14ag0930 Cone-Chr14:7509045 Cone14ag0931 Cone-Chr14:7523639 1.01E-75 tandem
Cone14ag0930 Cone-Chr14:7509045 Cone15ag0918 Cone-Chr15:7248142 5.49E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0930 - - - 0.0