Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0976 ATGAAGTTTGCAAAGCATTTCCTTGCTTGTTTGATTGCACTTTCAATTCTGGTCACATTTCTATCTCCAGGTTTCAGAAACCCTTCATTGGAGCTAATCAAGGGTTTGGGGATAACAGCCTCGCAATGTAAGCATGGAGATAAGGAAATTCTTAGAGACAAACTCCTTGGAGGACTTCTTACTCCTGGCCTGAATGAACAAACTTGCTTGAGTAGGTACCAATCTAGCTTGTACCGAAAAACGTCACCCCATATACCTTCTCCATATCTCCTATCAAAACTAAGAGGTTATGAAGATATTCATGCACGATGTGGACCCGGTTCGGCATACTACAAGGAAATATCGGACAGCCTCAAGTCTGGAAAAAACACTTCTTCCACAGAATGCAAGTATCTTGTGATTTTAACAAGAGACGGCCTGGGAAACCGAATACTTACCATGGCTTCGGCTTTTCTCTATGCACTTCTCACTAACCGTGTCTTACTTGTTGACCAAGGAAATGGCTTGGTAGATATATTCTGCGAACCATTCCCACAAAGGTCGTGGTTTCTTCCAAGTGATTTTCCTCTCAGAGGGCAATTCCGTCAATTTACCCCGCGGTTTCCGCAATCTTTCGGTAACATACGAAAGAACAACATGTCGATAATCCCACCTGAGTTAGAATCACTACCTTCATATTTATATCTCCATCTTGCCCATGATGCTAGTAATTATGATAAATTATTCTTTTGTGATCAAGACCAAGCCCTTCTAAAAAACGTCCCTTTGTTAATTACCCAAACAAATAACTACATTATCCCAGCTTTCTTTTTTGTGCCCTCCTTCGAAAAAGAGTTAACCAAACTATTCCCAAGAAAAGATACTGTCTTCCATCATATTAGTAGGTATCTCTTTCACCCCACAAATGAAGTATGGGGACTAATTACAAGGTCCTATGATGCTTATTTAAGTAAAGCAAAGGAGAAGATTGGCATTCAAATTCGGATTTACCATTCGGAGTCACCTCACTTCGAGCATCATATGGACAAAATCCTAGCTTGTGTCCAAAAGGAGAAATTGCTTCCGGAAACACTAAATCCTGGAACAGACAACATCACAAACATATCTTTATCAAAAAATGGAGAAGTGAGAACCGTGTTGATAACCTCTTTATATTCTCGTTACCAAGAGAATTTAAAGAACATTTATTGGGAACGTCCAAATGCAAATGGAGACATAATCGGCGTCTATCAACCAAGCCATGAAGAGGTTCAAAATGGAAAAGAGATGCACATTAAAAAAGCATTAGCCGAAATATTTCTATTAAGTTTTAGTGATGTTTTGGTCACTAGTGCTTGGTCAACATTTGGCTATGTGGCGCAAGGGCTTGCCGGGGTGGAGCCATGGATTTTGTACAAGCTCGAAGATACTGCTTTTAAGGGTTTGGATGAATGGCTTCCACACAAGAATGAAAATCTTACTGCTCATAGTTTGCCTTGTGAGAGAGCTAGGTCAATGGAGCCTTGTTTTCATGCACCCCCACTTTGTGATTGTAGTGCAACGACGAAGATTGATGCTGGAAAAGTTGTACCTTATGTGAAGCATTGTGAGGATTTGAGTTGGGGTATTAAGCTCTTTGATAGTGATCATAATTAG 1635 40.18 MKFAKHFLACLIALSILVTFLSPGFRNPSLELIKGLGITASQCKHGDKEILRDKLLGGLLTPGLNEQTCLSRYQSSLYRKTSPHIPSPYLLSKLRGYEDIHARCGPGSAYYKEISDSLKSGKNTSSTECKYLVILTRDGLGNRILTMASAFLYALLTNRVLLVDQGNGLVDIFCEPFPQRSWFLPSDFPLRGQFRQFTPRFPQSFGNIRKNNMSIIPPELESLPSYLYLHLAHDASNYDKLFFCDQDQALLKNVPLLITQTNNYIIPAFFFVPSFEKELTKLFPRKDTVFHHISRYLFHPTNEVWGLITRSYDAYLSKAKEKIGIQIRIYHSESPHFEHHMDKILACVQKEKLLPETLNPGTDNITNISLSKNGEVRTVLITSLYSRYQENLKNIYWERPNANGDIIGVYQPSHEEVQNGKEMHIKKALAEIFLLSFSDVLVTSAWSTFGYVAQGLAGVEPWILYKLEDTAFKGLDEWLPHKNENLTAHSLPCERARSMEPCFHAPPLCDCSATTKIDAGKVVPYVKHCEDLSWGIKLFDSDHN 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7997921 8000072 + Conep14aG0099600.1 Cone14ag0976 452825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0976 544 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 541 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone14ag0976 544 FunFam Galactoside 2-alpha-L-fucosyltransferase 127 178 - -
Cone14ag0976 544 Pfam Xyloglucan fucosyltransferase 52 511 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone14ag0976 544 Gene3D - 126 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0938 Cone-Chr13:8115929 Cone14ag0976 Cone-Chr14:7997921 8.42E-149 dispersed
Cone14ag0976 Cone-Chr14:7997921 Cone4ag0460 Cone-Chr4:2042425 0 dispersed
Cone14ag0975 Cone-Chr14:7989312 Cone14ag0976 Cone-Chr14:7997921 2.77E-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0976 K13681 - csv:101222105 587.415