Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0987 ATGAAAATGGCATGCTTCTCTTTTTTGTATCATAAGAGAATTCAAAATCCAGCAAAAGGACGTTATGATGTAGATGAAGTTTTTTCGGGCATTCACAATGTCAAATTCTATACATACAAAGAACTAAGTATCGCAACTGAAGATTTCAGTCCAGTCAATAAAATTGGAGAGGGCGGTTTTGGTGCTGTCTATAAGGGCAAACTCAGAGACGGGAAAATTGCAGCTATAAAAGTTCTTTCGCCTGAATCAAGACAAGGGGTTAAGGAATTCTTAACCGAGATTAATGTAATTACAGAAATAGAACATGAGAATTTGGTTAAACTTTATGGCTGTTGTGTAGAACAAGATCATAGAATTCTCATCTACAACTATCTTGAAAATAATAGCCTTCAACAAATGCTTCTGGGAAGAGGTTTTAGTGGATTACATTTGAATTGGCAAACAAGAAGGAGGATTTGTATTGGGATTGCACAAGGATTGGCCTTTCTTCATGAGGAAGTGAGACCTCATATAATTCACAGAGATATCAAAGCAAGCAATATTCTCCTCGATCAAGATTTGATGCCTAAAATCTCGGATTTCGGTCTTGCAAAGCTTCTTCCGGCAAGTATGACTCATGTAAGCACCCGTGTAGCAGGAACAATTGGTTATCTGGCACCGGAATATGCGATTAGAGGGCAATTGACCCGGAAAGCAGATATTTACAGTTTTGGAGTTCTCCTTGTAGAGATAGTCAGTGGAAGATGTAACACAAATACGAAACTACCGATCGAAGAACAGTACATTTTAGAAAGGACATGGGGACTTTATGAGCGAAGAGTGCTAGTCGAGCTAGTAGATACATCCTTGGACGGAAATTTTGATGCGGAGGAGGCTTGTAGGTTTCTGAAAGTCGGTCTACTTTGCACCCAAGATAGTCCAAAGCTCCGGCCATCAATGTCAACCGTGGTCAAGATGTTGACCAGTGAGATCGATATTGACAAATGTGAGATAACAAAGCCGGGTTTAATTTCCGATTTCATAGATCTTAAGATAAGAAATCCTGTTAAGGATAAAAAGAGTCTCACTTCTTATAACGGGACTTCTGAATCAGACAACCTGGATAATTCGACTTTGTCGTCTGGAATCTCAACTCTTCCCACCATGTCCTTTACTTCCTGA 1161 39.45 MKMACFSFLYHKRIQNPAKGRYDVDEVFSGIHNVKFYTYKELSIATEDFSPVNKIGEGGFGAVYKGKLRDGKIAAIKVLSPESRQGVKEFLTEINVITEIEHENLVKLYGCCVEQDHRILIYNYLENNSLQQMLLGRGFSGLHLNWQTRRRICIGIAQGLAFLHEEVRPHIIHRDIKASNILLDQDLMPKISDFGLAKLLPASMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRCNTNTKLPIEEQYILERTWGLYERRVLVELVDTSLDGNFDAEEACRFLKVGLLCTQDSPKLRPSMSTVVKMLTSEIDIDKCEITKPGLISDFIDLKIRNPVKDKKSLTSYNGTSESDNLDNSTLSSGISTLPTMSFTS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8136457 8139187 - Conep14aG0100700.1 Cone14ag0987 452836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0987 386 SMART serkin_6 49 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0987 386 FunFam cold-responsive protein kinase 1 20 124 - -
Cone14ag0987 386 SUPERFAMILY Protein kinase-like (PK-like) 32 327 IPR011009 -
Cone14ag0987 386 Gene3D Transferase(Phosphotransferase) domain 1 125 333 - -
Cone14ag0987 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0987 386 Pfam Protein kinase domain 52 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0987 386 CDD STKc_IRAK 55 321 - -
Cone14ag0987 386 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 356 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone14ag0987 386 FunFam cold-responsive protein kinase 1 125 336 - -
Cone14ag0987 386 Gene3D Phosphorylase Kinase; domain 1 15 124 - -
Cone14ag0987 386 ProSiteProfiles Protein kinase domain profile. 49 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0987 386 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0987 Cone-Chr14:8136457 Cone9ag0212 Cone-Chr9:902408 2.18E-166 dispersed
Cone10ag1407 Cone-Chr10:10929164 Cone14ag0987 Cone-Chr14:8136457 1.47E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82101 PF07992 Pyr_redox_2 5.40E-56 CL0063 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0987 - - - 0.0