Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0992 ATGGATATGGAAGAATCCATTTTTCCAACTATAGATAGTAATACAGATCGAGATCTCGATTTCAGCTTCACCAGCACTGCCTCAACGGCAACCGATCGGACCTTTGCATGTTCCTCCGCTCGCAGCAGCTTAGCTCGCAGCAGCTTAACTCTCAGCTTCAACGAATCTCGTCTCTCCTCCACCACCACCATCTCTAATGCCGCCTCCGCGGCCGCTAGCCGACAGCCTCTCGACATCCGACCTCACCGGAAAGCAGATCCGCAATGGTCGGCGATAAAGACCGCCACGACTCTCTCCTCCGATGGAAAACTCCATCTCCGCCACCTCAAGCTGCTCAACCACTTAGGCACCGGAAACTTAGGGCGAGTCTTCCTCTGCCGCCTTAGAGACAACGATCACGCGAATTTCGCCCTGAAAGTCGTCGATAAAGACTCGTTAAACAGCAAGAAGCTCTCTCAGGTTCAAATGGAGGCAGAGATACTCTCCATGCTCGACCATCCTTTCCTCCCTACGCTCTACGCTCGCCTCGAAGTCTCTCACTACACCTGTCTTCTAATCGACTACTGTCCCGGAGGCGATCTCCACTCTCTTCTTCGTAGACAGCCTGGTAACCGGCTGCCGGTTCGGGCGGTCAGATTCTTCGCCGGTGAGGTCTTAGTCGCGCTCGAGTACCTCCATTCTATTGGCGTAGTCTATCGCGATCTTAAACCAGAAAACGTCCTCTTACGCGACGATGGCCACATCATGCTCTCCGATTTCGATTTATGCTTCAAAGCCGACGTGGTCCCCACATTTCAAACCCGAACCCACAGATCAGTGACAAACCGCCAGGGAGTCAGTTGTTTCGGTTCGAACCGGAACGAGCAAGAGGAAAACATGGTGTCGGAATTTGTTGCGGAGCCAACGACGGCGTTTTCGAAATTGTGCGTTGGGACCCACGAGTATTTGGCGCCAGAATTAGTTTCCAGATCGGGTCACGGAAACGGTGTGGATTGGTGGGCATTTGGAGTGTTCGTATACGAATTGCTATACGGAACGACGCCGTTCAAGGGTGGGAGTAAGGAGGGAACGCTGAGGAACATAGCGTCGACAAAGGCAGTTAAATTTCCTTTTGGAGAGGGAGAAGAGGAGGTGGGGATGGAAGAAGCTAAGGATTTGATAGAGAGATTGTTAGTTAAGGATCCGAGGAGAAGGATGGGGTGTTCAAGTGGAGCCACTGAGATCAAACGGCATCCGTTCTTCGACGGGATTAAGTGGCCGTTGATCAGAATGTACCATCCACCGGAAAACATTCGCGGGTTGATGAGGAGGACTAAGACGGCGATGGCGCACGTGAGTCACGTGAGCGGGGTTGTTCCTCACCCGAAGAGACGGCGGTTGATGTGGAGCTGGAAGAGGCTGAGTTGCTTGTTTATTAGGAATAAGAAAAACGTTAGTCGTAGTCATTACTTGAACCAGAGTAATAGTAATTACTATCATTATGTTAGTAGTAATAATAAGTGA 1503 51.1 MDMEESIFPTIDSNTDRDLDFSFTSTASTATDRTFACSSARSSLARSSLTLSFNESRLSSTTTISNAASAAASRQPLDIRPHRKADPQWSAIKTATTLSSDGKLHLRHLKLLNHLGTGNLGRVFLCRLRDNDHANFALKVVDKDSLNSKKLSQVQMEAEILSMLDHPFLPTLYARLEVSHYTCLLIDYCPGGDLHSLLRRQPGNRLPVRAVRFFAGEVLVALEYLHSIGVVYRDLKPENVLLRDDGHIMLSDFDLCFKADVVPTFQTRTHRSVTNRQGVSCFGSNRNEQEENMVSEFVAEPTTAFSKLCVGTHEYLAPELVSRSGHGNGVDWWAFGVFVYELLYGTTPFKGGSKEGTLRNIASTKAVKFPFGEGEEEVGMEEAKDLIERLLVKDPRRRMGCSSGATEIKRHPFFDGIKWPLIRMYHPPENIRGLMRRTKTAMAHVSHVSGVVPHPKRRRLMWSWKRLSCLFIRNKKNVSRSHYLNQSNSNYYHYVSSNNK 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8212095 8213856 + Conep14aG0101200.1 Cone14ag0992 452841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0992 500 FunFam Probable serine/threonine-protein kinase cot-1 192 433 - -
Cone14ag0992 500 Gene3D Transferase(Phosphotransferase) domain 1 193 423 - -
Cone14ag0992 500 Pfam Protein kinase domain 307 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0992 500 Pfam Protein kinase domain 111 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0992 500 SMART serkin_6 109 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0992 500 Gene3D Phosphorylase Kinase; domain 1 108 192 - -
Cone14ag0992 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0992 500 PANTHER FLIPPASE KINASE 1-RELATED 40 433 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone14ag0992 500 ProSiteProfiles Protein kinase domain profile. 109 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0992 500 SUPERFAMILY Protein kinase-like (PK-like) 91 436 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0992 Cone-Chr14:8212095 Cone15ag0519 Cone-Chr15:2535127 4.99E-111 dispersed
Cone11ag1483 Cone-Chr11:10511741 Cone14ag0992 Cone-Chr14:8212095 2.40E-66 wgd
Cone12ag1543 Cone-Chr12:10981674 Cone14ag0992 Cone-Chr14:8212095 1.24E-100 wgd
Cone14ag0992 Cone-Chr14:8212095 Cone15ag0987 Cone-Chr15:7895874 1.28e-319 wgd
Cone14ag0992 Cone-Chr14:8212095 Cone18ag0111 Cone-Chr18:581489 5.54E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82102 PF06732 Pescadillo_N 1.30E-111 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0992 - - - 0.0