Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1014 ATGTCTGTCATTCAGTATACACTTGCAATTGATATATGGAGTATTGGCTGCATCTTTGCTGAGGTATTGACAGGAAAGCCGTTGTTTCCAGGAAAAAGTGTTGCTCATCAGTTAGATCTGATCACCGATCTTCTTGGGACAGCCCCATCGGAAACCCTTGTTGGGGTCCGAAGTGAAAAGGCCAGGAAATACTTGACTGAAATGCAGAAAAAATCTCCAGTGCCTTTTTCCCACAAGTTTCCAACTGCCGATCCTTTGGCACTCCGCTTGTTACAGAGACTATTAGCATTTGATCCAAAGGATCGGCCTACTGCGGAAGAGGCGCTGGCTGATCCATATTTTAAGGGCCTGTCCAAAGTTGAAAGAGAGCCTTCTTGCCAACCAATCTCAAAATTGGAGTTCGAGTTTGAGAGACGATGGGTAACAAAGGAGGACATAAGGGAATTACTATATAGAGAAATATTGGAATACCATCCCCAACTTCTCAAAGATTATATGAATGGAACAGAAGGCACAAATTTTCTTTACCCTAGTGCTATAGGTCAATTTAGAAAACAGTTCGCTTATCTTGAGGAAAATAGCGGTAAAAGCGGACCAGTTATACCTTTAGAGAGGAAGCATGTTTCCCTACCACGGATAGTAGACAGCAATGTTAAATTAAGTGATACCAAAGCTGGAACTGCATCAAAATCTTCCCGCCCGCTGCCAAAAGCACCAATTGCTCAACCTGGAAAAGTTATGGGGCCAGTCCAACCATATGAAACGAGCAGATCCACTAAAGATCCATACAATCCGAGGATCTTTCAGCGGAACGCGATTCTCTCCCCTCGGGTAGTCTCTCCACACTGTTTCTTCTGGCCCCACACTGTAAATAAGAATGAGAAAGTTGCTTATCATCAAAAGCAACCTCCACTCCAAAGCAAACCAGCCCCACAACCAGCTCCTATTGGCATGGCTATAGACACTACTAATACCCCATATTTTGACCGAATGGTTCTTGATGCTAAACTGATTCAAGTTCAGTCTCAGTTTGGTCCGGTTGGGGCCGTTGCTGTTGCCGTAGCAGCTCTCAGGAGTACCAGTAGCGTTCATTATGGGTTTGTCTTAGAATGA 1113 44.29 MSVIQYTLAIDIWSIGCIFAEVLTGKPLFPGKSVAHQLDLITDLLGTAPSETLVGVRSEKARKYLTEMQKKSPVPFSHKFPTADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKLEFEFERRWVTKEDIRELLYREILEYHPQLLKDYMNGTEGTNFLYPSAIGQFRKQFAYLEENSGKSGPVIPLERKHVSLPRIVDSNVKLSDTKAGTASKSSRPLPKAPIAQPGKVMGPVQPYETSRSTKDPYNPRIFQRNAILSPRVVSPHCFFWPHTVNKNEKVAYHQKQPPLQSKPAPQPAPIGMAIDTTNTPYFDRMVLDAKLIQVQSQFGPVGAVAVAVAALRSTSSVHYGFVLE 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8491794 8494288 + Conep14aG0103400.1 Cone14ag1014 452863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1014 370 Gene3D Phosphorylase Kinase; domain 1 138 160 - -
Cone14ag1014 370 FunFam Mitogen-activated protein kinase 1 136 - -
Cone14ag1014 370 SUPERFAMILY Protein kinase-like (PK-like) 5 159 IPR011009 -
Cone14ag1014 370 MobiDBLite consensus disorder prediction 221 264 - -
Cone14ag1014 370 Pfam Protein kinase domain 5 114 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1014 370 Gene3D Transferase(Phosphotransferase) domain 1 3 137 - -
Cone14ag1014 370 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1014 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 155 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1014 Cone-Chr14:8491794 Cone3ag1494 Cone-Chr3:33561670 1.21E-131 dispersed
Cone1ag0215 Cone-Chr1:1306078 Cone14ag1014 Cone-Chr14:8491794 5.27E-15 wgd
Cone12ag1527 Cone-Chr12:10784265 Cone14ag1014 Cone-Chr14:8491794 1.36E-116 wgd
Cone14ag1014 Cone-Chr14:8491794 Cone8ag1572 Cone-Chr8:11722153 1.06E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82103 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1014 - - - 0.0