Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1023 ATGAAGATTCAGTGTAACGTTTGCGAGGCGGCGGAAGCGAATGTGCTGTGCTGTGCGGATGAAGCGGCGCTGTGCTGGGCTTGCGACGAGAAGGTTCATGCGGCTAATAAGTTGGCCAGCAAGCACCAGAGGGTTCCTCTTTCTGGCTCTTCTTCTCAGATGCCGAAATGCGATATTTGCCAGGAGGCAAGTGGTTACATCTTTTGTCTAGAGGATCGAGCCTTACTTTGCAGAAAATGTGATGTTTCCATACACACCGCAAATAAATACGTATCTGGTCATCAGAGGTTCCTGTTAACCGGCGTGAAGGTGGCTCTTGAACCTACTGAACCAGGCGCTTCCTCTTCCATGATAAAATCACATTCCGAGGAGAAAACGTCAGAGCCTAAATCTAGTAGTCCTGCATGGAGAAGAGGTCTTACTATGTCCTCAGCTGATGAATTGAGTGAAACGTTACCTACACGTGTTGGTGGACTTGGGGACTTTGCACCAACCAGAGGGTCATTCTCTGGAGGCTCTATTGGTGGTGGCTTTCCTCAATGGCATGTAGACGACTTTATGAGTCTGACCGGATTCGGTCATAGCTATGGTTATATGGATAACAACTCATCAAAGGCTGATAGTGGCAAGCTTGGGGACTCTGACTCATCAGCTCTAAGAGCTTCAGAGGAAAGTCTAGATGACGAGGAGTGCCTTGGTCAAGTACCGGATGCTTCTTGCACCGTACCTCAGATTCCCTCTCCACCTACAGCATCCGGGTTGTACTGGTCCAGAAATTTTCTCAACCAAATGGATGGACCCGTCTCTGTCCCTGATTTATGCTTCTCCCCTGCACAAAAGCCCCACCGCTATCAGCATAATAACGCGCGCTTCAAACGGAGGAGGCAGAATTAG 894 49.11 MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSGSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVSIHTANKYVSGHQRFLLTGVKVALEPTEPGASSSMIKSHSEEKTSEPKSSSPAWRRGLTMSSADELSETLPTRVGGLGDFAPTRGSFSGGSIGGGFPQWHVDDFMSLTGFGHSYGYMDNNSSKADSGKLGDSDSSALRASEESLDDEECLGQVPDASCTVPQIPSPPTASGLYWSRNFLNQMDGPVSVPDLCFSPAQKPHRYQHNNARFKRRRQN 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8542344 8544637 + Conep14aG0104300.1 Cone14ag1023 452872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1023 297 Pfam B-box zinc finger 53 96 IPR000315 GO:0008270(InterPro)
Cone14ag1023 297 Pfam B-box zinc finger 3 47 IPR000315 GO:0008270(InterPro)
Cone14ag1023 297 CDD Bbox1_BBX-like 56 99 IPR049808 -
Cone14ag1023 297 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 263 IPR051979 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER)
Cone14ag1023 297 Gene3D Classic Zinc Finger 1 93 - -
Cone14ag1023 297 SMART bboxneu5 52 99 IPR000315 GO:0008270(InterPro)
Cone14ag1023 297 SMART bboxneu5 4 47 IPR000315 GO:0008270(InterPro)
Cone14ag1023 297 MobiDBLite consensus disorder prediction 205 227 - -
Cone14ag1023 297 CDD Bbox1_BBX-like 5 47 IPR049808 -
Cone14ag1023 297 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270(InterPro)
Cone14ag1023 297 MobiDBLite consensus disorder prediction 110 138 - -
Cone14ag1023 297 FunFam B-box zinc finger protein 22 1 93 - -
Cone14ag1023 297 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1023 Cone-Chr14:8542344 Cone18ag0848 Cone-Chr18:5803138 1.49E-44 dispersed
Cone14ag1023 Cone-Chr14:8542344 Cone17ag1378 Cone-Chr17:9569772 5.74E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44784 None None None None Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1023 - - - 0.0