Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1027 ATGGGTTTTGTTCTAATTATGCCCTTCAAGTTCAGAATTGTTCATGCTATCCTTTCCGGGTCTCTGATTTTGATTTTGTTTTCCGACGCTACACTCTTGCCTGCAGATGAAGTTAAAACCCTTCAAGCAATTTCCTCCAAGCTAAAGGGCTTGAATTGGAGAGTTACTCCAAGTTCTTGCATCAACGGGGAAGGCTTTGGTAATGCAGTAATTAATGGGAAAGTAAGTTTAAGAAATGTCACTTGTACACCCAATGGTTCCCATGTCACCAGTATAATTATGAAAGGTCTCAATTTGATTGGAGTTCTACCAGGAGAATTTGGAAATCTTACTCAGTTACAAGAACTTGATCTTACTCGAAACTATATCAACGGAACAATACCGGAAAGTTTCTCTCAGATTCCTCTTGTCAAACTTTCACTCTTGGGAAACCGGCTTAGCGGTCCGATTCCTCCGGAAATTGGTGACATTACTTCACTTCAAGAGTTGGTCTTACAAGATAATCAACTAAGCGGAAGGCTGCCCGACCGGCTTGGAAATTTGAGCAACTTGACTAGACTGGTTCTTACATCGAACAATTTTTCGGGACAAATACCAGAATCATTTGGGAACCTAAAGAACTTAGAAGAGTTTAGCATAGATGGGAATGCGATTTCCGGGAAGATACCTGAATTTATTGGGAACTGGAAAAATATTACGATACTGAGTATGCAAGGAACATCATTGGAGAACCCCATTCCTTCTTCAATATCTCTACTGGAAAATTTAAATGAACTGAGGATAACTGATCTAAAGGGATCATCTATAAATTTTCCCAATTTGACAAGAATGATTAGTATGACAGAATTGGTCCTAAGAAAATGCTTAATTGAAGACAGGATCCCGGATTATATTCAACAAATGAATAAATTAAAATTTTTGGATTTGAGCTTCAACATGTTGACCGGTCCGATTCCGGAGATGCTTCCAAACCTACTTCAGGCGCCGCCCAACAAACTTGAGTACTTATTTCTTTCCAACAACTCACTGACCGGGAAAGTACCGAATTTGATATTAAACAGCGACAGGAACATTGATTTGTCTTGCAACAATTTCACGACCTCGCCTGATCAGTCTAGTTGCGTTCGAGCAGATGTGAATTTAGCTTCTAGTGTTTCTCCTGCAGCGAATGATCAAGGCATTCCTTGGTGTCTCAAGAAGGATCTTAAATGCTCTAAGAAACCCAAATATCATTCCTTGTTTATTAATTGCGGAGGAAAATTAGAGAAGATTAATGGGAATGAATATCAAGAGGACTTAGCAAATGATGGAAAATCAAACTTCTTTTCTGTTTCGGAAAAATGGGGTTATAGTAGTACCGGGGTTTACTTGGGCAATGAAGCTGCTTCTTACACAGCAACAAATGATCAACTGTTCCGTCTGAATCTGACCGGCCCAAGTCTCTATGAAACTGCCCGGATCGCTCCAGTCTCCCTTAAGTACTATGGCCTCTGCTTGATAGAGGGAAGTTACAATGTGAAGCTCCATTTTGCTGAAATAATGTTTTCTCATGACCAAACATACAGTAGCCTTGGCAATCGTATTTTCGACATTTTCATTCAAGGGAATTTAGTTAAGAAGGATTTTAATCCAATGGAGGCGGCAAGAAGGGTCGGAAAAGACTTCATAGTTCATGAAGAAAAAATTGTCTATGTTGATGGAACTACTCTTGAGATACATTTATATTGGGCGGGAAAAGGAACTACACAAATTCCCTATAAAGGAGTGTATGGACCTCTTATATCAGCCATCACAGTCACACCAAACTTTAGAATTGGATTATCAGGTGGAGCTATTGCCGGCATTGTGGTTAGTTCGTGTCTGCTAGCTGTTCTTATAATCGCATTTCTCCGAATTAAAGGGTACTTATGCTGGAAAGATATTGAAGATAATGAATTGCGTGGATTAGATTTGCGGACAGGTTATTTCAGTTTGAGACAAATTAAAGCTGCCACTGGCAACTTTGATCATTCAAATAAGATAGGGGAAGGAGGTTTCGGGCCAGTGTACAAGGGTGTTCTCTCAGATGGTTCTTTAATTGCCGTTAAGCAGCTATCCTCCAAATCAAAGCAAGGCAACCGTGAATTTGTTACAGAAATCGGAATGATATCTGCAGTGCAACACCCGAATCTTGTCCAGCTTCATGGTTGTTGTATAGAAGGAAACCAGCTCTTGCTTATATATGAATACATGGAAAATAATAGTCTTGCCCGTGCGCTTTTCGGCCATGACGATCAAAGATTAAACTTAGATTGGCCGACGAGAAAGAAGATATGCTTGGGGATAGCAAGAGGATTGGCATATCTTCATGAGGAATCGAGATTAAAGATTGTTCACAGGGACATAAAAGCTACTAATGTGTTGCTTGATAAACATCTAAATGCCAAAATATCGGATTTTGGTTTAGCTAAGCTTGATGAAGAGGAGAACACCCACATAAGCACGCGAATTGCCGGGACTATAGGCTATATGGCTCCCGAGTATGCAATGAGGGGTTACTTGACCGACAAGGCAGATGTTTATAGCTTTGGAATCGTTGCTTTAGAAATTGTTAGTGGGAAAAGCAATACGAATTGCAGACCAAAAGAGGAGTGTGTTTATCTGCTTGATTGGGCTTGTGTTCTACAAGAACAAGGAAACATTCTTGACCTAGTGGATCCAGTTCTTGATTCAAAGTACTCAACAGAAGAAGTTTTGAGGATGCTCAACATAGCTCTCTTATGCACCAACCAATCTCCCACTCTTAGACCATCTATGTCTTCTGTTGTGAGTATGCTTGAAGGCAATATTCTGGTACAAGCACCCATCATTAAGCTCAACGCATTACAAGAACCCGATGCTCGATTTAAGGCCTTTCAAAAGCTAAAGCAAGAGAGCCAAACGTCAGTCTCGACATCATTGCAAGAGAGTCGAGTGTTGCGGAAAAGTATGTCGGTCGAAGGGCCGCGCATTGACACTTCAATCTCTATTTCAAGTAACGACGAGGTGCTTGATCACTCCTTTTCAAATACGCTCTCTAAGGATCTTTACGATGTCAATCTGGATTGA 3087 40.46 MGFVLIMPFKFRIVHAILSGSLILILFSDATLLPADEVKTLQAISSKLKGLNWRVTPSSCINGEGFGNAVINGKVSLRNVTCTPNGSHVTSIIMKGLNLIGVLPGEFGNLTQLQELDLTRNYINGTIPESFSQIPLVKLSLLGNRLSGPIPPEIGDITSLQELVLQDNQLSGRLPDRLGNLSNLTRLVLTSNNFSGQIPESFGNLKNLEEFSIDGNAISGKIPEFIGNWKNITILSMQGTSLENPIPSSISLLENLNELRITDLKGSSINFPNLTRMISMTELVLRKCLIEDRIPDYIQQMNKLKFLDLSFNMLTGPIPEMLPNLLQAPPNKLEYLFLSNNSLTGKVPNLILNSDRNIDLSCNNFTTSPDQSSCVRADVNLASSVSPAANDQGIPWCLKKDLKCSKKPKYHSLFINCGGKLEKINGNEYQEDLANDGKSNFFSVSEKWGYSSTGVYLGNEAASYTATNDQLFRLNLTGPSLYETARIAPVSLKYYGLCLIEGSYNVKLHFAEIMFSHDQTYSSLGNRIFDIFIQGNLVKKDFNPMEAARRVGKDFIVHEEKIVYVDGTTLEIHLYWAGKGTTQIPYKGVYGPLISAITVTPNFRIGLSGGAIAGIVVSSCLLAVLIIAFLRIKGYLCWKDIEDNELRGLDLRTGYFSLRQIKAATGNFDHSNKIGEGGFGPVYKGVLSDGSLIAVKQLSSKSKQGNREFVTEIGMISAVQHPNLVQLHGCCIEGNQLLLIYEYMENNSLARALFGHDDQRLNLDWPTRKKICLGIARGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNCRPKEECVYLLDWACVLQEQGNILDLVDPVLDSKYSTEEVLRMLNIALLCTNQSPTLRPSMSSVVSMLEGNILVQAPIIKLNALQEPDARFKAFQKLKQESQTSVSTSLQESRVLRKSMSVEGPRIDTSISISSNDEVLDHSFSNTLSKDLYDVNLD 1028
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8568692 8576717 + Conep14aG0104700.1 Cone14ag1027 452876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1027 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1027 1028 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515(InterPro)
Cone14ag1027 1028 CDD STKc_IRAK 674 941 - -
Cone14ag1027 1028 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515(InterPro)
Cone14ag1027 1028 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515(InterPro)
Cone14ag1027 1028 Pfam Leucine Rich Repeat 332 352 IPR001611 GO:0005515(InterPro)
Cone14ag1027 1028 ProSiteProfiles Protein kinase domain profile. 668 945 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1027 1028 SUPERFAMILY Protein kinase-like (PK-like) 652 951 IPR011009 -
Cone14ag1027 1028 SUPERFAMILY L domain-like 76 324 - -
Cone14ag1027 1028 Pfam Protein tyrosine and serine/threonine kinase 671 938 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1027 1028 Gene3D - 411 602 - -
Cone14ag1027 1028 Gene3D Transferase(Phosphotransferase) domain 1 744 948 - -
Cone14ag1027 1028 Gene3D Ribonuclease Inhibitor 37 189 IPR032675 -
Cone14ag1027 1028 SMART serkin_6 668 939 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1027 1028 Pfam Malectin domain 413 597 IPR021720 -
Cone14ag1027 1028 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 175 268 - -
Cone14ag1027 1028 Gene3D Ribonuclease Inhibitor 190 384 IPR032675 -
Cone14ag1027 1028 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 174 - -
Cone14ag1027 1028 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 637 743 - -
Cone14ag1027 1028 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 42 955 IPR051824 -
Cone14ag1027 1028 ProSiteProfiles Leucine-rich repeat profile. 332 354 IPR001611 GO:0005515(InterPro)
Cone14ag1027 1028 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 951 - -
Cone14ag1027 1028 Gene3D Phosphorylase Kinase; domain 1 639 743 - -
Cone14ag1027 1028 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 410 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1027 Cone-Chr14:8568692 Cone15ag1011 Cone-Chr15:8308745 0 dispersed
Cone11ag1440 Cone-Chr11:10274035 Cone14ag1027 Cone-Chr14:8568692 4.22E-13 wgd
Cone14ag1027 Cone-Chr14:8568692 Cone15ag1009 Cone-Chr15:8168530 4.54E-178 wgd
Cone14ag1027 Cone-Chr14:8568692 Cone18ag0147 Cone-Chr18:764303 1.88E-13 wgd
Cone14ag1027 Cone-Chr14:8568692 Cone6ag0206 Cone-Chr6:969913 0 wgd
Cone14ag1027 Cone-Chr14:8568692 Cone9ag0212 Cone-Chr9:902408 8.79E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82104 PF14541 TAXi_C 5.00E-27 CL0129 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1027 - - - 0.0