Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1047 ATGCGATTTTCATCGAAAGAAAGGGGTAATCGGATGGGGTCTAGGCTCCGGAAGAAGCGGAAGAGGCTTGATGCCATTTGTGAGAAAGAGTATAGTAGAAATCGTGGAGATTTGAATGAGGGGAGTGGTGGAGCGGGAAGGAATGTGACAGATGATACAGAGCTTAGACGGAGTTCTAGGGTTCGTAGGGCCCCGGTTTTGCTTGATGTTTCGCCACAGCCGAAGAGGCGGAGGATTCACAAGAATGTGGCTTTGAGTGTTAAGAAAAGCTCAGCTCGTGTGAAGGAGAATACACAAGATTCAGAGACTCCAGGAATTTGGGGATCAAGGTTGAGAGCAAGAAGTGGGAACTTGAGGTTCGGGGTGGAGGAGGAAAGAGGTTTGGTGAGAGGTAAGAGAAAGCTTTTTAAAGAAAAGAGAGCTAAGGATGAAGAGAATGTGGTGGAGGTGGAAATGGATGGGGACAAAGGAGATATGGAAGGTGGGAATTCTAGAGTTGTGAAGGCAGGGAGACATGGAAAGATGAAATCTATAAATTTTTCATGGGACAGAGAGAAAGAGAAAGAGTTGTTTGGTATTAAAGAAGATAATGAGAGTGAAGAAAACATGGAGAGCAAAAGTAAGGAGAGTTTAGAAGATGAGATTGAGAAGGAAGAACTGGAGGACATGGGGAGCGAAAGTGAGGAGGGTGTAGAAGATGAGACTGAGAAGGAAGATACACTGGGGGATACGGAGAGCGAAAGTGAGGAGAGTATTCAAGATGAGAATGAGAGGGAAGAAATGAAGGTAATGGGGAACAATGGTGAGGGTATGGAAAATGAGAATGAGGGGGAAGAAATGGTGGTAATGGAAAACAGTGGTGAGGATGGTATAGAAGATGAGGATGAGAGGGAAGAAATTGTGTTGATGGGGAACAATGGCAAGGAGGTCACGGATGATGAGATTGAGAGGGAGGAAATGGTGATTTCTGAGAGCAAAGGCGAGGGGAGTGCTTTAATTTGGAGTAGTCAAATGGTTGTTGGAAATGAAAGGGAAATCTTAGATGGCAAGCTTCCCCGGGACATTGACAAAGGGGATAAAGAAATTTCAGATGGTTTGCACCCAGAACGGACTGGCATTGATAATGATAATGTAGAGGCTGTGGATATTGAGGATCTATTGGAACATAGGGAGAAGGAGCAGGAAGAAGTAGAATATGCAAAGGAAGATGTAAATCAAACTTATGATGAAGTACCTGGTGAAGTTACAACGATGAAAGAGGCAAATGGAGGAACATGTGACAGGAAGGATGTTGATGTGCCTAAACTTGATAAAAATTCCTTAGAACATGAGAATGGTTTGAACATGTCTAGTCGACTGCATAGTAAGCAATGCATTATAGAGGGAAGAAGGTGTGGTTTGTGTGGAGGGGGTACTGATGGAAAACCTCCCAAAGTAGTCCAAGACATGGGTGAGAGTGAGAATGAGACATGGTGTGATGATTCAGTTCCAGAAGAACCTAACTACGACATATGGGATGGCTTTGGTGAGGAACCTGGCTGGCTTGGACGTCTCCTAGGTCCTATAAATGATCGTTATGGGATTGCAGGAATATGGGTCCACCAACATTGTGCCGTATGGAGTCCAGAGGTTTATTTTGCTGGTTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGCAGGGGAAGAGCATTGAAGTGCACCCGTTGTGGGAGGCCAGGAGCTACTATCGGATGTCGTGTTGATCGGTGTCCAAGAACTTACCACTTGCCTTGCGCACGTGCTTATGGTTGCATTTTTGATCATCGGAAGTTTCTCATTGCCTGCACAGATCATCGGCATATCTTCCAACCTCATGGCAATCAATATCTGGCCCAAATAAAGAAAATGAAGGCTAAGAAAATGAAGATGGAAGTCCGGAAGGTGTCAAATGATGCTTGGCGAAGGGACATTGAAGCAGAAGAGAAGTGGCTAGAGAACTGTGGCGAGGATGAAGAGTTTTTGAAACGAGAGAGCAAGAGGCTTCATCGAGATTTGCAGAGAATTGCTCCTGTGTACATTGGAGGCTCTGGGTCAGAAGGTGAAAACCTATTTCAGGGTTGGGAATCTGTTGCTGGGCTCCAAGATGTTATCCAATGCATGAAAGAAGTTGTCATCTTACCTCTTCTCTATCCCGAGTTTTTTGATAATCTGGGAATTACACCTCCTAGAGGAGTTCTTCTTCATGGATATCCTGGAACTGGTAAAACTCATGTTGTAAGAGCGTTGATAGGTGCTTGTGCTCGTGGCGATAAACGAATAGCATATTTTGCCCGAAAAGGTGCAGATTGTTTAGGGAAATATGTTGGCGATGCTGAGCGACAGCTAAGACTCTTGTTTCAGGTCGCTGAGAAATGTCAACCTTCTATTATATTCTTTGATGAGATAGATGGTTTGGCACCTCAAAGAACAAGGCAGCAAGATCAAACTCACAGCTCGGTTGTGTCAACCTTGCTTGCTCTTCTAGATGGTTTGAAATCTCGTGGTTCTGTTGTAGTCATTGGTGCAACTAATCGTCCTGATGCTGTCGATCCAGCATTAAGACGGCCTGGAAGATTTGATAGAGAGATTTACTTTCCTCTTCCATCCATGGCTGACAGGGCTGCCATTCTCTCTCTTCACACTCAAAAGTGGCCAAAACCGGTTGGAGGACTTTTGCTCGAGTGGATTGCAAGGAAAACTGCTGGTTTTGCTGGTGCTGATCTTCAGGCTCTATGTACACAAGCAGCTATTATTTCTTTGAAGCGGAATTTCCCTTTGCACGACGTTTTGTCTTCTGCTGGAGAGAATGGCTTCCTTGGTAAACGCCCTACTCTTCCTGCCTTTGCCGTGGAGGAGAGAGATTGGTTAGAGGCTATATCATGTGCTCCTCCCCCATGCTCTCGTAGAGAAGCTGGAATGGCCGCTAATAGTGTGGTTTCCTCTCCTCTTCCCTCCCACCTTCTTCCTTGCCTGATAAAGCCATTATCAACTTTACTTGTTTCCCTCTATACTGACGAACGTATCTGGTTGCCGACTACTCTTTCAAATGCTGCTATAACAATTAAAAGTGTAATAGTTTCTGCGTTAGATAAAAAGAAAATGGCTACTAATCATTGGTGGTCTTATGTTGATAACTTTATTCAAGAAGCTGAGATAGCAAAGGAAATTGGGGGAAAGCTTTGGTCTACTGGTTTATTACTTGGAGATACAAGCACTTCAGACCTTGATGCCTTTAATCGGGATATTGAAAACAGTGAGGAGTTTAAATCTTCCATAAAGCGTAATGGTGAATCTGGTACATGTTCGATAGAACACCTATCATTTGCCTCAAAAAATAAGTCAGGCTTTCGGATACTGATTGCTGGAGATCCCAGATCTGGGCAGAGGCACCTTTCATCTTGCCTTCTTCACTGCTTTGTTGGAAATATTGAAGTTTTAAAGGTTGATTTGGCTTCAATTTCACAAGATGGACATGGAGATGTGGTGCAAGGAATAACGCAGATATTAATGAAATGTGCTAGTGTGCGATCATGCATTGTGTTCATGCCTAGAATCGACTTATGGGCTGTTGAGACATGTCGTCAAGTCACCGAGGAGGAGGGTGATACCTTTTCAACTGATGAAGAATCTCCTGAGAAGGAAGAATCTTTTGTTAGACCTAGCCAATTCAGCGAAAAGAAAGATGAGAATAGTTCAGAGGAAACCGAATTTTGTGCTTCACATGCCTGGTGTTCGTTTGTTGAGCAAGTGGGATATTTGTGTGTGTCTGCATCCTTGATGATTTTGGCCACTTCAGAAGTTCCATTTCCTCTACTTCCGGAAAGAATAAGGCAGTTCTTCAGAAATGACGTTTCAATCTGCAGTCAGACTACTCTGTCTGAGCACACAGTACCTAGATTCTCCGTGCAGATTGATGGGAATTTCAATCGTGATGTCGTAATCAATCTATCTGCAGCAGAGTTATCAAGGGATATAGTCCAATTGCTTGCTCAATTCATTCACCAAAAATCACATATTAATACAACTCTGACATCTAATAATTACAGAGCTGATTGTCCTGAAGGCAACACTGAGAAAGTATTGGGCAATGGACAAGAGGATGTAATAAAACCTCTTAACAAACCTTCTTCACCACCTAACAAAGGGAAATCAACCTTGCATTTAGCTATATCTACATTTGGGTATCAAATTCTGCGTTACCCACATTTTGCAGAACTTTGCTGGGTTACATCGAAATTAAAAGAAGGCCCATCTGCAGACATAAGTGGCCCGTGGAAGGGATGGCCTTTCAACTCTTGTATTACCCATCCTATGAACTCGCTACAAAAGGTATCATTCAATAATGGCGTTAACAATGTTAAAGCCAAGGAAAAATCTGGTATAGTAAGAGGCCTAGTTGCTGTTGGTTTATCAGCATATCAAGGAGTCTACACATCACTAAGGGAAGTCTCCTCCGAGGTAAGGAAAGTTCTTGAACTTCTAGTCGGACAAGTAAATTTGAAAGTCAATGCGGGGAAAGACGGGTATCAGTATGTCCGTCTTCTATCACAAGTCGCTTATCTAGAAGACATGGTTAATAACTGGGCTTACACACTGCAGAGCTTAGAGCAGGGTGCACCAAGAATAGTGTTAAATCCAGACAAAGAACATGCTTGTGATGATAATGGGGTTCAGAGCAAGGAAAACAACCCTGATGTTTTGCCCGACAGTTCCCATTTACTAGAAACAGATGAAGGTTGTCTTAAGGCATGTATTGATGAGAAAGTGGAAAGTGTTGACTTGTCCGAGGTAAATGGGGGCCATTTGGGCCATTATTCCTCTGCACCTGATGCGTCCACCCATCATGATTCAGCCCCTGCTAATGACCAATCATTTGATAATGTTTCCGTTGAGCGCAATGAAACAATATTCAGTCCATATGAGGTGGGGAATTTGCAACGACAAGTAAATGGAATCGGGCCTAGAGATTCTGTGCTCATTTCTGAAAATGGTCTTGGTTCTGGTGATAAATTATCCGGCGACTTAAATTTCAGCATGAAAAACAATGGGTCGTGTTCCACAGAATCTGGTACTAGATTTGATGATTCCAGCGAGCCTCAAACAGGTGACCAGAATGTGGACCACACTTGTTCTTCAAGTAAAAACGATGTTTCTACTAGCTCTGAGGGGATTGTATGTTCGTTTTATTGCTGTTCTGATTGCCTAAGCATCCTTCATGGCTGGACTAAGAAAATTCTCTCCTATGAATTTGGATCGAATAGAACCGATTTGACTGCAGATGATGTTCATGATGTTGTAGCGACATTGTCTTTGGATCTTCTTGCTGCTGTAAGAAAAGTGCTAGTAACTGGAGATACAAGAAATTTGCTCGACCAAAACCTAAGACAAGGAAATTCAGATTCAAGAGCATGTCAGTGTAAATATTCAACGAGCATGGATTTCAAGCCGGGTGAATGCAGTTGTCATGAGCAGACCAAGAGTACATTAAGTGCAGAAGCAAATACCTCCCTTTTCATTTCGAAGTTTATATTTAGAGATGGTGTTTTGGTTAGTGTAGAACCTGAGAAGGGTGTCCCTTTACATTGTAGATTTGAGAGATTATGCCTCTGTTCACTTATTGAGTTGCTAGGATTGACAAAATGGCACACATTTCCGATCTGA 5682 43.03 MRFSSKERGNRMGSRLRKKRKRLDAICEKEYSRNRGDLNEGSGGAGRNVTDDTELRRSSRVRRAPVLLDVSPQPKRRRIHKNVALSVKKSSARVKENTQDSETPGIWGSRLRARSGNLRFGVEEERGLVRGKRKLFKEKRAKDEENVVEVEMDGDKGDMEGGNSRVVKAGRHGKMKSINFSWDREKEKELFGIKEDNESEENMESKSKESLEDEIEKEELEDMGSESEEGVEDETEKEDTLGDTESESEESIQDENEREEMKVMGNNGEGMENENEGEEMVVMENSGEDGIEDEDEREEIVLMGNNGKEVTDDEIEREEMVISESKGEGSALIWSSQMVVGNEREILDGKLPRDIDKGDKEISDGLHPERTGIDNDNVEAVDIEDLLEHREKEQEEVEYAKEDVNQTYDEVPGEVTTMKEANGGTCDRKDVDVPKLDKNSLEHENGLNMSSRLHSKQCIIEGRRCGLCGGGTDGKPPKVVQDMGESENETWCDDSVPEEPNYDIWDGFGEEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRPGATIGCRVDRCPRTYHLPCARAYGCIFDHRKFLIACTDHRHIFQPHGNQYLAQIKKMKAKKMKMEVRKVSNDAWRRDIEAEEKWLENCGEDEEFLKRESKRLHRDLQRIAPVYIGGSGSEGENLFQGWESVAGLQDVIQCMKEVVILPLLYPEFFDNLGITPPRGVLLHGYPGTGKTHVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPQRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSMADRAAILSLHTQKWPKPVGGLLLEWIARKTAGFAGADLQALCTQAAIISLKRNFPLHDVLSSAGENGFLGKRPTLPAFAVEERDWLEAISCAPPPCSRREAGMAANSVVSSPLPSHLLPCLIKPLSTLLVSLYTDERIWLPTTLSNAAITIKSVIVSALDKKKMATNHWWSYVDNFIQEAEIAKEIGGKLWSTGLLLGDTSTSDLDAFNRDIENSEEFKSSIKRNGESGTCSIEHLSFASKNKSGFRILIAGDPRSGQRHLSSCLLHCFVGNIEVLKVDLASISQDGHGDVVQGITQILMKCASVRSCIVFMPRIDLWAVETCRQVTEEEGDTFSTDEESPEKEESFVRPSQFSEKKDENSSEETEFCASHAWCSFVEQVGYLCVSASLMILATSEVPFPLLPERIRQFFRNDVSICSQTTLSEHTVPRFSVQIDGNFNRDVVINLSAAELSRDIVQLLAQFIHQKSHINTTLTSNNYRADCPEGNTEKVLGNGQEDVIKPLNKPSSPPNKGKSTLHLAISTFGYQILRYPHFAELCWVTSKLKEGPSADISGPWKGWPFNSCITHPMNSLQKVSFNNGVNNVKAKEKSGIVRGLVAVGLSAYQGVYTSLREVSSEVRKVLELLVGQVNLKVNAGKDGYQYVRLLSQVAYLEDMVNNWAYTLQSLEQGAPRIVLNPDKEHACDDNGVQSKENNPDVLPDSSHLLETDEGCLKACIDEKVESVDLSEVNGGHLGHYSSAPDASTHHDSAPANDQSFDNVSVERNETIFSPYEVGNLQRQVNGIGPRDSVLISENGLGSGDKLSGDLNFSMKNNGSCSTESGTRFDDSSEPQTGDQNVDHTCSSSKNDVSTSSEGIVCSFYCCSDCLSILHGWTKKILSYEFGSNRTDLTADDVHDVVATLSLDLLAAVRKVLVTGDTRNLLDQNLRQGNSDSRACQCKYSTSMDFKPGECSCHEQTKSTLSAEANTSLFISKFIFRDGVLVSVEPEKGVPLHCRFERLCLCSLIELLGLTKWHTFPI 1893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8819772 8827166 - Conep14aG0106800.1 Cone14ag1047 452896

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 21 36 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1617 1634 - -
Cone14ag1047 1893 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 615 IPR013083 -
Cone14ag1047 1893 Coils Coil 201 228 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 177 213 - -
Cone14ag1047 1893 ProSitePatterns AAA-protein family signature. 844 862 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1 108 - -
Cone14ag1047 1893 ProSiteProfiles Extended PHD (ePHD) domain profile. 490 613 IPR034732 -
Cone14ag1047 1893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 966 IPR027417 -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1693 1726 - -
Cone14ag1047 1893 SMART AAA_5 735 876 IPR003593 GO:0016887(InterPro)
Cone14ag1047 1893 Gene3D - 875 933 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 214 254 - -
Cone14ag1047 1893 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 875 967 - -
Cone14ag1047 1893 Coils Coil 383 410 - -
Cone14ag1047 1893 PANTHER AAA DOMAIN-CONTAINING 42 1882 IPR045199 GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0016887(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1206 1237 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1553 1578 - -
Cone14ag1047 1893 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 460 615 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1217 1237 - -
Cone14ag1047 1893 Gene3D - 701 874 IPR027417 -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 140 276 - -
Cone14ag1047 1893 Pfam PHD-like zinc-binding domain 534 613 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 1607 1634 - -
Cone14ag1047 1893 MobiDBLite consensus disorder prediction 140 167 - -
Cone14ag1047 1893 FunFam ATPase family, AAA domain-containing 2 699 881 - -
Cone14ag1047 1893 Pfam ATPase family associated with various cellular activities (AAA) 739 874 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone14ag1047 1893 Pfam AAA+ lid domain 900 931 IPR041569 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1047 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0618 Cone-Chr11:3863113 Cone14ag1047 Cone-Chr14:8819772 1.71E-73 dispersed
Cone14ag1047 Cone-Chr14:8819772 Cone18ag0880 Cone-Chr18:6205395 5.53E-75 dispersed
Cone14ag1047 Cone-Chr14:8819772 Cone15ag1035 Cone-Chr15:8588510 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g170 . . . . Bpe09g00245 . . Bma13g00940 Cmo16g00439 . . . . . . . . . . . . . . . Cla10g00660 Cam10g0656 Cec10g0680 Cco10g0652 Clacu10g0679 Cmu10g1503 Cre10g0883 . . Cone14ag1047 Cone15ag1035 . . . . . Blo10g00749 . Bda12g00871 . . . . . . . . Cma16g00407 . Car16g00371 Cpe14g00341 . . . . . . . . Cla05g00998 Cam05g1089 Cec05g1097 Cco05g1091 Clacu05g1083 Cmu05g1033 Cre05g1108 . . Chy06g01166 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002378 1 1 1 1 1 2 1 2 3 1 2 2 1 1 3 1 2 2 1 2 3 3 2 2 7 2 1 5 3 1 60