Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1056 ATGGCTGATGCTGAAGCTATATCAGAATTTTCTGGATCAAGGTTTAGTTCATTGGAGCTTATCGGAAGAGGATCATTTGGCGATGTTTACAAAGGGTTTGATAAGGAGCTTAAAAAAGAAGTTGCTATTAAAGTCATTGATTTGGAAGAATCAGAGGATGAAGTTGAGGATATCCAGAAGGAAATTTCTGTTCTGTCGCAATGTCGATCTCCATATATCACCGAGTATTATGGCTCTTATCTCCACCATACTAAACTCTGGATAATAATGGAATACATGGCCGGTGGTTCTGTTGCAGACCTTCTCCAAATTGGACCACCACTAGATGAAGGGTCGATTGCTTGCATTTTAAGTGATTTGCTGCATGCAATTGAATATTTACATAATGAAGGAAAAATTCACAGGGATATCAAAGCGGCAAACATTTTACTGACCGAGAATGGTGATGTTAAGGTTGCAGATTTTGGTGTCTCTGCACAATTAACAAGGACAATATCGAGAAGGAAGACATTCGTAGGAACCCCTTTCTGGATGGCACCAGAGGTAATTCAAAATTCAGACGGGTACGATGAGAAGGCTGATATTTGGTCTCTAGGGATAACTGCTATTGAGATGGCGAAAGGGGAACCTCCTCTTGCTGATCTTCATCCAATGAGAGTTCTTTTCATCATACCTCGAGAAACTCCACCCCAGTTGGATGAGCATTTTTCTCGTCCATTGAAAGAATTTGTGTCACTGTGTCTAAAGAAACTGCCAGCTGAAAGGGCTAGTGCTAAGGAGCTCCTAAAGCACCGTTTCATTAGGAATGCTAGAAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAGCGGCCCAAGTGCCTAATAAAGGATGACGAAGAAACTCCTAGAACTGACCCTAGAGGTATAGGGGAGATGTCAGATACTGTGAAGGTATCGAGAAATTTTAGAGATGGAACTGTTCGAGCCAGTGATGAAGTTAAAGCCTTGAAAAATGCTGGATGGAACTTCAGCATTGGTGGAACCATTGGTTCAGGTACGGTACGAAGTGCGGTAAAACCACCTCAAAATAGGGAAAAGAGAGCAGAGGTTCAATCTGGTCAGGGTGGTCCAGCAAGAATTCTAGATACTGCTAGTGATGGTTCTGATGAAAATCAAGTGAATGCTAGTGAAGATGAAGATTCATCTATTAGCGGTTCAGGAACTGTTGTCATACGATCCCCCAGAGGATCTCGGTCCTCTGCTCAATTTCATCATCAAAGCACTTCCTTTGGGAGCAACCACTCTTCTTCTGAAGAGGCTTCTTCTGTTGGAACTGTAGTTATCCGTGGCCAATATGACGGTTCTGTTTCTCCTCGAACTCCTAAGTCAACAATTGGATTTCAAGGGAGATCTTCCTCAACCTTCTCCCTTGAAGACAGTGCATCAAATCTTGCCGAGGCCAAGGCCGCAATGCAAGCAGCATTAAGGAAAGGAAATGCTAGAGAAAGGTCCGCAGTTAGTAGGAGGAACAATGATGCAAAGGAAAATAAAAAACAAGAGCAAGTGAAAAATAGCTCCGATTATTCCAGACATTCGCCCGATTACTTTGATGCACCAAAATCATTTCCAATATCACGCCAGGATGATAAAGAAATTGCAAAAGTAGCAGCAGCATCTGCGCCTTTGTCAGTTTTGCTCATCCCATCCTTGAAAGAGGTTATTCTTGACGACTCAGAAGGGTCAGTAGTGCATTCAGTTGCTAATTCGCTTATAAATATGGAACACTTGAATCCCGGAGCTTGCGAAGTTTATATCAGCAGGTTGCTTAAGCAATTAGCAAGTTCAAAGGAGTCTTCACTGAAAGATTTACAAGAGCTTGCAGCATGGGTTTTCAGCAAGGGAAGAGCAGCAGGCCAAGAAGAAAAGTATAGTAATAATGCAAATGCCAGTCCTGATGGCTGGAAAAAGCAACAGAAAAAGGCTCTTCTTTCTGATTCCAATATGAGCCCGCTTGCTCGGTTTTTACTCTCAAGATGGCAAGGTCATGCGGCACAGGATCTCAACTTGGCGGCTTAG 2055 42.82 MADAEAISEFSGSRFSSLELIGRGSFGDVYKGFDKELKKEVAIKVIDLEESEDEVEDIQKEISVLSQCRSPYITEYYGSYLHHTKLWIIMEYMAGGSVADLLQIGPPLDEGSIACILSDLLHAIEYLHNEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYDEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRETPPQLDEHFSRPLKEFVSLCLKKLPAERASAKELLKHRFIRNARKSPRLLERIRERPKCLIKDDEETPRTDPRGIGEMSDTVKVSRNFRDGTVRASDEVKALKNAGWNFSIGGTIGSGTVRSAVKPPQNREKRAEVQSGQGGPARILDTASDGSDENQVNASEDEDSSISGSGTVVIRSPRGSRSSAQFHHQSTSFGSNHSSSEEASSVGTVVIRGQYDGSVSPRTPKSTIGFQGRSSSTFSLEDSASNLAEAKAAMQAALRKGNARERSAVSRRNNDAKENKKQEQVKNSSDYSRHSPDYFDAPKSFPISRQDDKEIAKVAAASAPLSVLLIPSLKEVILDDSEGSVVHSVANSLINMEHLNPGACEVYISRLLKQLASSKESSLKDLQELAAWVFSKGRAAGQEEKYSNNANASPDGWKKQQKKALLSDSNMSPLARFLLSRWQGHAAQDLNLAA 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8907549 8915194 - Conep14aG0107700.1 Cone14ag1056 452905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1056 684 MobiDBLite consensus disorder prediction 378 437 - -
Cone14ag1056 684 MobiDBLite consensus disorder prediction 494 520 - -
Cone14ag1056 684 Coils Coil 41 68 - -
Cone14ag1056 684 MobiDBLite consensus disorder prediction 343 467 - -
Cone14ag1056 684 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Cone14ag1056 684 MobiDBLite consensus disorder prediction 633 653 - -
Cone14ag1056 684 MobiDBLite consensus disorder prediction 485 533 - -
Cone14ag1056 684 CDD STKc_MST3_like 13 285 - -
Cone14ag1056 684 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 628 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Cone14ag1056 684 Coils Coil 470 490 - -
Cone14ag1056 684 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1056 684 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Cone14ag1056 684 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1056 684 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
Cone14ag1056 684 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1056 684 Gene3D Transferase(Phosphotransferase) domain 1 11 300 - -
Cone14ag1056 684 MobiDBLite consensus disorder prediction 288 309 - -
Cone14ag1056 684 MobiDBLite consensus disorder prediction 449 467 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1056 Cone-Chr14:8907549 Cone19ag0899 Cone-Chr19:7013667 6.13E-74 dispersed
Cone11ag1416 Cone-Chr11:10139827 Cone14ag1056 Cone-Chr14:8907549 9.26E-29 wgd
Cone14ag1056 Cone-Chr14:8907549 Cone18ag0174 Cone-Chr18:905353 9.90E-26 wgd
Cone14ag1056 Cone-Chr14:8907549 Cone6ag0161 Cone-Chr6:791788 8.60E-299 wgd
Cone14ag1056 Cone-Chr14:8907549 Cone9ag0187 Cone-Chr9:814399 1.36E-305 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82105 PF01764 Lipase_3 2.20E-36 CL0028 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1056 K08838 - vvi:100258981 909.442