Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1058 ATGGTGGTGCTGAAATTTATCCCAATGACTTCTTTACTCAAATGGGTACTCCTCGTTTCCTTGGTCAGTTCATCTCTTGGTCTCAAAATCTCAACCCGAATCTGTGATCGAAATGACCTTTTAGGCCTCAAAGAATTTGCAGGAAATCTCACTAACACCTCTCTCCTATCTTCTCTCTGGTCCAACGATTCAATCTGCTGTAAATGGGCTGGTGTTGTTTGTGAGAATATGAATAATAGAGTAATAGAATTGATTCTTCCAAATATGGGTCTTAAAGGGATGATTTCACATTCATTGGGCCAATTAGATCATCTAAATTCGCTCAATCTTTCATGTAATAGTCTTGAAGGTGGATTGCCTGAATCTCTATCAAACTTGAAGCAGCTCAAAGTTCTTGATTTTAGCCAAAACAAGTTATCCGGACCTATTTTCGATCCACTTTCCGGGATGGTATCACTTCAGATTCTTAATATATCCGGAAATTCATTCACAGGCAAGTTCTATTCAAGAATCTGCCATTCATCGAATCGGATTCGGGTCCTCGATATATCAAAAAATAGTTTTTCGGGTAATCTTCTCGGAGGGTTAGAAAATTGCAGTTCATTTCTTCAACAATTCCATGCAGATTCTAATTTGCTTGAAGGCAAAATTCCGGATTCTTTCTATTCATTATCTGCCTTGGAGAGAGTTTCTTTATCTGGGAACAACCTTTACGGCGAATTGAGCAGGGAATTGAGTAAGCTCTCCAGTCTTAAAAGCTTTATAATTTCTGGCAATCAATTTTCGGGTGAAATTCCGAATGTCTTTCAGAACCTTACGAAGCTAGAAGAGCTAAATGCAGATTCAAATTTGTTTACCGGGAAATTGCCTTCTACTCTATCACTCTGTTCTACCCTTAAAGTTATTAATCTTAGGAACAATTCTCTAAGGGGCCATATTGATCTTGATTTTACTAGATTACATAGTCTTTGCACACTTGATCTTGGCTCTAATCATTTTTACGGGTCACTTCCAATTTCGCTGTCTAATTGTCCGGAACTGCAAATTCTAAGCCCGGCTAGAAATGAATTAGTGGGACAAATCCCGGAAAGTTATGCAAAGTTCAAGTCTTTATGGTTTCTCTCTTTATCGAAAAATAGCTTTGTGGGTTTGAATCGAGCACTTTCCATTTTACAGCAATGCAAGAATCTTAGTACTATGATTCTTACAAAGAACTTTCACAGGGAGGATATTCCGGTAAATGTGACCGGGTTTGAAAACTTGGTCCTTTTGGCTCTTGGAAATTGTGGTTTGAGAGGTCCAATTCCGATTTGGCTATTACATTGCAAGAGGCTAAGCATCCTCGATTTGTCTTGGAATCAGCTTAATGGGTCTATACCTTCTTGGATTGGTCAGATGGAGAATTTGTTCTACTTGGACTTGACCAATAATTCTCTTTCAGGGGAAATTCCGAAAAGTATGAACGAATTGAAATCGCTTATTTTCCCAAGATGTCGTTCGTCAAATCTCACAACTTTTTCCGGGATTCCATTAATTGTTAAGAGAAATCGAAGTTCAAGTGGTCTTCAATACAAACAAGCATCAAGCTTTCCTCCGTCCATTTTCTTGAGCAATAATAGAATAAACGGGACTATCCGACCTGAAATCGGAAACTTGAAACAACTACATGTTTTGGATTTGAGCCGGAACAACATTTCGGGAACCATCCCTAGTTCCATTTCCGACATGGGCAATCTGGAGGTGTTGGATTTATCGAACAATGATCTTTCCGGATCAATCCCTCCACTGTTCAACAAGCTTACATTCTTGTCCACGTTTAGTGTAGCAAATAATCATTTAAGTGGAGCAATTCCAAGTGGAGGTCAATTCTTAATCTTCCCGAGCTCAAGCTTTGAAGGCAACCCAGGTCTCTGTGGAGAAATCGATTCGCCTTGTTCTTCCAGTAAAGATTCTGGAATAAAACCCGAAATGAATAAAACTTCTTCAAGACATAATAAACTAAGTACAAGTACTATTCTCGGAATAACATTCGGAATCGGGATCGGAGTGGCACTAATCCTGGTCATTTTTGTACTTGTTATTTCAAGGAAAGGTGTTGGAAGTATTCCAATCGGGAATTTTGATGAAGAATTTTCGAGGCCACGTAGGTTGTCTGAAGCTCACAGGTTTTCAAAATTGGTCCTTTTTCAAAACTCTGAATGCAAGGATCTAACCGTAATGGAGTTGTTAAAATCGACTGGGAATTTCAACCAAGAGAATATAATTGGTTGTGGTGGGTTCGGTTTGGTTTACAGGGCTGAGTTCCGGAACGGGTCAAAGGCTGCAGTCAAGAGACTTTTGGGAGATTGCGGTCAAATGGAACGGGAATTTCAAGCCGAAGTAGAAGCCCTTTCTAGAGCACAACATGACAACTTAGTCTCTCTTCAAGGCTATTGCCTCCATGGAAACGACAGGTTATTGATCTACTCCTATATGGAAAACGGAAGCTTGGACTATTGGCTCCATGAACATCCCGAAAAGGAGGGTCCAGGCTCGTCTCTAAAATGGGAAGTGAGGGTCAAGATAGCTTTGGACTCGGCCCGTGGGCTGGCCTACTTGCATAAAGAATGTGACCCAAGCATAATCCGCCGGGATGTGAAATCAAGCAATATTCTCTTAAGCCGAAATTTCAAGGCCCATTTGGCCGATTTCGGGCTTTCAAGGCTACTCCAGCCGTACGACACACATGTCACGACAGAATTGGTGGGGACTTTGGGGTATATTCCCCCAGAATATTCCCAGACCTTGTGTGCGACTTTGAGGGGCGATGTTTATAGTTTCGGTGTCGTCCTGCTGGAGCTTTCGACAGGAAGGAGGCCGGTTGAAGTAGGGAAAGGGAAGAATTGTCGGGATTTGGTTTCGTGGGTGGATCAGATGAAATCAGAGAGGAGAGAAGAGGAGATTGTAGATACCGCTATTTGGGATAAACCGTGTGAGAAAGAATTGCTCGAGGTTCTTGGGATTGCTTGTAGATGCATTGATCTTGATCCGAGGCGAAGACCGTTGATCGAAGAAGTTGTTGCTTGGCTTGATGATGTTCAGTTTCGGGTTTCTCAACAGAAGAAATGTTGA 3111 41.27 MVVLKFIPMTSLLKWVLLVSLVSSSLGLKISTRICDRNDLLGLKEFAGNLTNTSLLSSLWSNDSICCKWAGVVCENMNNRVIELILPNMGLKGMISHSLGQLDHLNSLNLSCNSLEGGLPESLSNLKQLKVLDFSQNKLSGPIFDPLSGMVSLQILNISGNSFTGKFYSRICHSSNRIRVLDISKNSFSGNLLGGLENCSSFLQQFHADSNLLEGKIPDSFYSLSALERVSLSGNNLYGELSRELSKLSSLKSFIISGNQFSGEIPNVFQNLTKLEELNADSNLFTGKLPSTLSLCSTLKVINLRNNSLRGHIDLDFTRLHSLCTLDLGSNHFYGSLPISLSNCPELQILSPARNELVGQIPESYAKFKSLWFLSLSKNSFVGLNRALSILQQCKNLSTMILTKNFHREDIPVNVTGFENLVLLALGNCGLRGPIPIWLLHCKRLSILDLSWNQLNGSIPSWIGQMENLFYLDLTNNSLSGEIPKSMNELKSLIFPRCRSSNLTTFSGIPLIVKRNRSSSGLQYKQASSFPPSIFLSNNRINGTIRPEIGNLKQLHVLDLSRNNISGTIPSSISDMGNLEVLDLSNNDLSGSIPPLFNKLTFLSTFSVANNHLSGAIPSGGQFLIFPSSSFEGNPGLCGEIDSPCSSSKDSGIKPEMNKTSSRHNKLSTSTILGITFGIGIGVALILVIFVLVISRKGVGSIPIGNFDEEFSRPRRLSEAHRFSKLVLFQNSECKDLTVMELLKSTGNFNQENIIGCGGFGLVYRAEFRNGSKAAVKRLLGDCGQMEREFQAEVEALSRAQHDNLVSLQGYCLHGNDRLLIYSYMENGSLDYWLHEHPEKEGPGSSLKWEVRVKIALDSARGLAYLHKECDPSIIRRDVKSSNILLSRNFKAHLADFGLSRLLQPYDTHVTTELVGTLGYIPPEYSQTLCATLRGDVYSFGVVLLELSTGRRPVEVGKGKNCRDLVSWVDQMKSERREEEIVDTAIWDKPCEKELLEVLGIACRCIDLDPRRRPLIEEVVAWLDDVQFRVSQQKKC 1036
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8925541 8929641 - Conep14aG0107900.1 Cone14ag1058 452907

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1058 1036 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 715 824 - -
Cone14ag1058 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 227 313 - -
Cone14ag1058 1036 SUPERFAMILY L domain-like 55 384 - -
Cone14ag1058 1036 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515(InterPro)
Cone14ag1058 1036 Pfam Leucine rich repeat 534 589 IPR001611 GO:0005515(InterPro)
Cone14ag1058 1036 Gene3D Phosphorylase Kinase; domain 1 711 824 - -
Cone14ag1058 1036 Gene3D Ribonuclease Inhibitor 270 652 IPR032675 -
Cone14ag1058 1036 CDD STKc_IRAK 755 1024 - -
Cone14ag1058 1036 FunFam Leucine-rich repeat receptor-like protein kinase 825 1034 - -
Cone14ag1058 1036 ProSiteProfiles Leucine-rich repeat profile. 578 600 IPR001611 GO:0005515(InterPro)
Cone14ag1058 1036 ProSitePatterns Protein kinases ATP-binding region signature. 755 777 IPR017441 GO:0005524(InterPro)
Cone14ag1058 1036 ProSiteProfiles Protein kinase domain profile. 749 1028 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1058 1036 SMART LRR_typ_2 102 126 IPR003591 -
Cone14ag1058 1036 SMART LRR_typ_2 466 490 IPR003591 -
Cone14ag1058 1036 SMART LRR_typ_2 320 344 IPR003591 -
Cone14ag1058 1036 SMART LRR_typ_2 272 296 IPR003591 -
Cone14ag1058 1036 SMART LRR_typ_2 552 575 IPR003591 -
Cone14ag1058 1036 SMART LRR_typ_2 224 248 IPR003591 -
Cone14ag1058 1036 SMART LRR_typ_2 576 599 IPR003591 -
Cone14ag1058 1036 Gene3D Ribonuclease Inhibitor 36 195 IPR032675 -
Cone14ag1058 1036 FunFam Tyrosine-sulfated glycopeptide receptor 1 317 651 - -
Cone14ag1058 1036 SUPERFAMILY L domain-like 391 639 - -
Cone14ag1058 1036 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Cone14ag1058 1036 SMART serkin_6 749 1028 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1058 1036 Gene3D Transferase(Phosphotransferase) domain 1 825 1035 - -
Cone14ag1058 1036 Pfam Leucine Rich Repeat 445 466 IPR001611 GO:0005515(InterPro)
Cone14ag1058 1036 Pfam Leucine Rich Repeat 250 272 IPR001611 GO:0005515(InterPro)
Cone14ag1058 1036 Pfam Leucine Rich Repeat 468 488 IPR001611 GO:0005515(InterPro)
Cone14ag1058 1036 Pfam Protein tyrosine and serine/threonine kinase 751 1021 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1058 1036 SUPERFAMILY Protein kinase-like (PK-like) 732 1023 IPR011009 -
Cone14ag1058 1036 PRINTS Leucine-rich repeat signature 445 458 - -
Cone14ag1058 1036 PRINTS Leucine-rich repeat signature 576 589 - -
Cone14ag1058 1036 Gene3D Ribonuclease Inhibitor 197 269 IPR032675 -
Cone14ag1058 1036 PANTHER OS04G0122200 PROTEIN 58 167 IPR051809 -
Cone14ag1058 1036 FunFam Nuclear pore complex protein NUP107 36 194 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1058 K27626 - - cit:102609589 1275.77
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1058 Cone-Chr14:8925541 Cone17ag0290 Cone-Chr17:1391782 1.42E-139 dispersed
Cone20ag1117 Cone-Chr20:7652069 Cone14ag1058 Cone-Chr14:8925541 4.81E-21 dispersed
Cone14ag1058 Cone-Chr14:8925541 Cone6ag0157 Cone-Chr6:780724 1.70E-237 wgd
Cone14ag1058 Cone-Chr14:8925541 Cone9ag0181 Cone-Chr9:798380 1.55E-241 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g193 . . . . Bpe09g00240 . . Bma13g00942 Cmo16g00436 . . . . . . . . . . . . . . . . . . . . . . Cone6ag0157 Cone9ag0181 Cone14ag1058 . . . . . . Blo10g00752 . . . . . . . . . . Cma16g00736 . Car16g00368 Cpe14g00338 . . . . . . . . Cla05g01002 . . . . . . . . Chy06g01163 .
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82106 None None None None Cone PK