Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1062 ATGGAAGGTTCATCCGATTCCCCTTGGCATAAATCCGATAATACGAGAGGATTAAACACTTCTCTTAGTCTTCTTCGATCCAATAGTTCTGGGTCTAGAAATGAAAGAGATAGTAGTATAAGAAATCGAGATGGTTTATCTGGAGTTTGCGAGGAACATGAAGAAGAAGAACAACAACAACGATCAGGAATGGACCCTTTTGTTCCTTCTATAGAATGGGGCGATATTAGCTTAAGACAATGGTTGGATAAACCGGACAGATCCGTAGATTCCTTTGAATGTCTTCATATCTTTAAGCAAATACTGGAGATTGTAAATGTAGCTCATTCCCATGGAATTGTTGTTCACAATGTTAAACCTTCTTGCTTTGTCATGTCCTCTTTTAACCATGTCTCATTCATTGAGTCTGCTTCTTGCTCGGATTCTGGCTCTGATTCCCCAGAAGATGGTCTAAATAGCCTGTCAGGAGAGGGTAAAAGGGTAATTAGTACATTACCAAGTAGTTTTAGTTTTCGCCCATTTTCAAACCAGCCAATAAATGCTTTATCGGAAACTACTTGTATGCACCCTAGTTCACTCTATGCAGCGAGGGCTTCTTTGATTGAAGAGACTGAACAGCATAAAAACAAAGATAGAAGTAATGTTGTTGAAGAGAAGAAGCAATCTTTTCCTATGAAACGAGTATTGGTGATGGAGAATAGTTGGTACACTAGTCCCGAAGAAGGGTCCAGTTCTCTCACTTGTGCTTCGGACGTGTATCAATTGGGTGTTCTTCTTTTTGAGTTATTCTGCCCCTTCAGCTCGAGAGAAGAAAAAAGTCGAACTATGTCTAGTCTAAGACATAGAGTTCTTCCTCCTCAATTGCTTTTGAAGTGGCCAAAAGAAGCTTCCTTTTGCCTATGGTTACTCCACCCTGATCCCACTTGTCGGCCTAAGCTGAGTGAGTTGTTACAAAGCGAATTCCTAAACGAGTCTAGAGACAATCTCGAAGAATGTGAAGCAGCAATAGAGCTCAAAGGAAGAATAGAGGAGCAAGAGTTATTACTCGAATTCCTTTTACTCATACAACAAAGAAAACAAGAAGCTGCTCACAAGTTACAAGACACCATTTCTTTCCTCTGTTCGGATATTGAAGAAGTCATGAAGCACCAAAATATCCTTGGGAAAAAGAGTTATTCATGTCCTGAATTCGGAGATGACGACCAGTCCACCTCAACTCCTATCCCTTCCATGAATATCACAGAAAACAATGAGTCTGCTTTATTCGGGTCAAGGAAACGGTTTAGACCCGGAAGACCATTCGATGATGATAATAATACGAATGATGGAGAGAAATCTGACACGGTCACGGAAACTGAAGGAAGCTCACTTCATAATAATTCTCGTTTGATGGACAACTTCAAGAAGTTGGAGTCGGTTTATTTTATGATGAGATGTAGACCGACCAAGCCATCGAGGAAACCATTAGCAAGACTTTCATCTATAAGTAGTGATGGTAGAGGGTCTATTGTTCTGACCGAAAGAAGTTCCGATAATAACAATAATATGACATTAAAGGAGCGGTATAATGAAACTAGTCAAGGTGGTTGGATAAGTCCGTTTCTTGATGGTTTGTGCAAGTATCAATCTTTTAGTAAGTTAAGAGTTAAGGCAGATTTGAAGCAAGGGGATCTTTTAAATTCATCGAATCTTGTATGTTCCCTAGGTTTTGATCGGGATGGAGAGTTTTTTGCTACAGCCGGTGTGAATAGGAAGATTAAAGTATTTGAATGTGACTCAGTCATAAATGAAGACCGAGATATCCATTATCCGGTAGTTGAAATGGCTACTAGGTCAAAACTAAGTAATATTTGCTGGAATAAGTATATCAAAAGCCAAATCGCTTCGAGCAACTTTGAAGGTGTGGTCCAGGTATGGGACGTCGCTCGGAGTCAAATGATAATGGAAATGAGAGAACACGAGAGGCGAGTATGGTCTATTGATTTCTCCTCAGCAGACCCCACAATGCTAGCGAGCGGCAGTGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGGCAATTCTAAATTTTTTGCAAAAACGGAGTAAGTATTGGAGCGATCAAAGCAAAGGCCAATGTTTGTTGTGTCCAATTTCCATTGGATTCCGCTCGGTCCCTTGCATTTGGTTCAGCTGA 2178 40.45 MEGSSDSPWHKSDNTRGLNTSLSLLRSNSSGSRNERDSSIRNRDGLSGVCEEHEEEEQQQRSGMDPFVPSIEWGDISLRQWLDKPDRSVDSFECLHIFKQILEIVNVAHSHGIVVHNVKPSCFVMSSFNHVSFIESASCSDSGSDSPEDGLNSLSGEGKRVISTLPSSFSFRPFSNQPINALSETTCMHPSSLYAARASLIEETEQHKNKDRSNVVEEKKQSFPMKRVLVMENSWYTSPEEGSSSLTCASDVYQLGVLLFELFCPFSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPTCRPKLSELLQSEFLNESRDNLEECEAAIELKGRIEEQELLLEFLLLIQQRKQEAAHKLQDTISFLCSDIEEVMKHQNILGKKSYSCPEFGDDDQSTSTPIPSMNITENNESALFGSRKRFRPGRPFDDDNNTNDGEKSDTVTETEGSSLHNNSRLMDNFKKLESVYFMMRCRPTKPSRKPLARLSSISSDGRGSIVLTERSSDNNNNMTLKERYNETSQGGWISPFLDGLCKYQSFSKLRVKADLKQGDLLNSSNLVCSLGFDRDGEFFATAGVNRKIKVFECDSVINEDRDIHYPVVEMATRSKLSNICWNKYIKSQIASSNFEGVVQVWDVARSQMIMEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAILNFLQKRSKYWSDQSKGQCLLCPISIGFRSVPCIWFS 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8950375 8955445 - Conep14aG0108300.1 Cone14ag1062 452911

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1062 725 SUPERFAMILY Protein kinase-like (PK-like) 66 330 IPR011009 -
Cone14ag1062 725 PANTHER PROTEIN SPA1-RELATED 2 54 687 IPR044630 GO:0009640(InterPro)
Cone14ag1062 725 MobiDBLite consensus disorder prediction 428 451 - -
Cone14ag1062 725 ProSiteProfiles Trp-Asp (WD) repeats profile. 650 685 IPR001680 GO:0005515(InterPro)
Cone14ag1062 725 SMART WD40_4 604 640 IPR001680 GO:0005515(InterPro)
Cone14ag1062 725 SMART WD40_4 643 683 IPR001680 GO:0005515(InterPro)
Cone14ag1062 725 SMART WD40_4 555 590 IPR001680 GO:0005515(InterPro)
Cone14ag1062 725 MobiDBLite consensus disorder prediction 396 461 - -
Cone14ag1062 725 MobiDBLite consensus disorder prediction 397 421 - -
Cone14ag1062 725 ProSiteProfiles Protein kinase domain profile. 1 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1062 725 MobiDBLite consensus disorder prediction 36 61 - -
Cone14ag1062 725 Gene3D - 536 707 IPR015943 GO:0005515(InterPro)
Cone14ag1062 725 MobiDBLite consensus disorder prediction 138 157 - -
Cone14ag1062 725 SUPERFAMILY WD40 repeat-like 561 686 IPR036322 GO:0005515(InterPro)
Cone14ag1062 725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 650 685 - -
Cone14ag1062 725 SMART serkin_6 9 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1062 725 Pfam WD domain, G-beta repeat 647 683 IPR001680 GO:0005515(InterPro)
Cone14ag1062 725 Pfam WD domain, G-beta repeat 562 589 IPR001680 GO:0005515(InterPro)
Cone14ag1062 725 Gene3D Transferase(Phosphotransferase) domain 1 75 333 - -
Cone14ag1062 725 MobiDBLite consensus disorder prediction 1 67 - -
Cone14ag1062 725 MobiDBLite consensus disorder prediction 1 35 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1062 K26557 - - rcu:8273738 853.588
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1062 Cone-Chr14:8950375 Cone8ag0255 Cone-Chr8:1460573 5.08E-94 dispersed
Cone6ag0256 Cone-Chr6:1175415 Cone14ag1062 Cone-Chr14:8950375 5.52E-06 dispersed
Cone9ag0291 Cone-Chr9:1256640 Cone14ag1062 Cone-Chr14:8950375 9.56E-06 dispersed
Cone14ag1062 Cone-Chr14:8950375 Cone15ag1054 Cone-Chr15:8721448 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g219 . . . . . . . . . . Cma01g01208 . Car01g01033 Car09g00778 Sed04g2397 . . Bhi09g03427 Tan01g4395 Cmetu07g0812 . Hepe01g1386 . . . . . . . . . . . Cone14ag1062 Cone15ag1054 . . . . . . . . . . . . . Cmo01g01262 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003437 3 3 1 2 3 0 2 1 0 1 1 1 2 1 1 2 0 2 2 1 1 1 1 1 1 1 1 3 2 4 45