Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1063 ATGGGGTGCCTTTGTTGCAAGCCCTCTGTTATAGAAGATAGCCCAGAGGACCCATGTAATCAGAAATTGATTAAGGCGTCGTCAAGTTTCCAAGTCTCAAGAGTGACTTCATTGAGAAGGGAGGAGTTCCATCGATCTAAACATGATCAGAATGATATAAAGGCAATGTTGATAGATAAGCATGTGAATAGGTCTTCTAATTTTGAAAAGAAAAGGGAGAATTTGGAGTATGTGGTTGCTCCTCCATATCCTGGGATTGGGAGAATTCCTAAATCTATTGAAGGTGAGCAGATTACGGCTGGTTGGCCTAGCTGGTTAGCTGCAGTTGCTGGAGAAGCAATCAGAGGATGGCTACCCAGAAAAGCTGATTCTTTTGAGAAACTAAATAAAATTGGCCAGGGAACTTACAGTAGTGTGTATAGAGCTCGTGACCTTGTCCGAAACAAACTTGTTGCTCTGAAGAAAGTAAGATTTGATAGCTTTGAGCCTGAGAGTGTCCGTTTTATGGCAAGGGAAATTCACATTTTGCGTAGACTTGATCATCCAAATGTAATAAAACTTGAAGGTTTAGTTACATCAAGATTGTCAACTAGCTTGTACCTTGTTTTCGAGTATATGGAACATGACTTAACCGGGCTTGCAACACTCCCTGACCTGAAGTTTTCAGAAGAACAGGTCAAATGTTACATGCAACAACTATTATTGGGACTTGATCATTGCCATAGTCGTGGTGTTTTGCACCGTGACATTAAGGGTTCTAACCTTCTAATCGACAACAATGGCATCTTGAAAATTGCAGACTTTGGTCTAGCATCTCTTTTTGATGTCCCTCAAAATCACCCATTAACTAGCCGTGTCGTAACCCTTTGGTACAGACCGCCGGAGCTTTTACTTGGAGCCACTTACTATGGGACTGCCATTGATTTGTGGAGTACTGGTTGCATACTTGCTGAATTGTATGCGGGCAAGCCCATTATGCATGGAAGAACTGAGGTTGAACAATTACATAAAATATTTAAGCTTTGTGGTTCACCGTCTGAGGATTATTGGAAAAAATCAAAGTTGCCCAATGCCACCATATTTAAGCCCCAACAACCCTATAGACGCTGTGTTGCAGAAACTTTTAAAGATTTCCCAGCACCAGCATTAGCTCTTGTGGAGATCCTGCTCTCCATTAATCCTACTGATCGTGGATCTGCGGCTTCTGCTCTTACGAGTTTGTTTTTCACAACAAAACCACTTCCCTGTGACCCTTCGAACTTGCCAAAATATCCTCCCAGCAAAGAATTGGATGCAAAAATACGGAATGAGGAAGCTAGAAGACAAGGAGGCAAGGGCCAAAGACCTAACCTAGAGAGAAGAGCAACAAGAGAATCTCAAGCTATTCCTGCACCCAATGTCAATACTGAATTAGTATTGTCAATGGAGAAAAAACAAAGCTATTCCAATTCAAGGAGCCGTAGTAAGAAGTTTAACCCTCACCCAGAAGAAGCTGCTTCCGGGCTTCCAGTCGATCCACCTAGACCATCTCAAGTCGAAGATCTTAATGTAGACCATCATCCCGAACGGGCCTTCCATTCTGGGCCGCTGGCCCATCAGGCTATCCCGGCAATTTCCGGTAAGAACCAGGATGCTGCTGCTCTAAGGAGTTTAACTGGGGCCGACTTCTCTGCTTTGTCTGGAATAGTGGCAGCAAGGAGAAGCATGTTAGCTTCAGAATGCAGAGAAAGTTCTGTTTCTTCTTCACAAACAGAAGCTCCTCAAAAAATAATGGACAGGTTTCTAATGTCCTTCAAGGAAACTTCCGGAACCTTACAGGATCATCAAAAGTGTTTTAAGAAGGAAGAGGGAAAACTCAGCAGCAAAAATCCAGTTCCCATTGGTTATGGATCGACGGGACAGAAAATTCATTACTCGGGCCCATTACTGGTTCAATCAGGTAATATGGATCAAATGTTGAAGGACCATGATCGGCAGATACAAGAAGCCGTTAGACGAGCTCACATTGACAAGGAAAAGGTCAGAAAAGTTTTGAGTTGA 2040 42.94 MGCLCCKPSVIEDSPEDPCNQKLIKASSSFQVSRVTSLRREEFHRSKHDQNDIKAMLIDKHVNRSSNFEKKRENLEYVVAPPYPGIGRIPKSIEGEQITAGWPSWLAAVAGEAIRGWLPRKADSFEKLNKIGQGTYSSVYRARDLVRNKLVALKKVRFDSFEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRLSTSLYLVFEYMEHDLTGLATLPDLKFSEEQVKCYMQQLLLGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASLFDVPQNHPLTSRVVTLWYRPPELLLGATYYGTAIDLWSTGCILAELYAGKPIMHGRTEVEQLHKIFKLCGSPSEDYWKKSKLPNATIFKPQQPYRRCVAETFKDFPAPALALVEILLSINPTDRGSAASALTSLFFTTKPLPCDPSNLPKYPPSKELDAKIRNEEARRQGGKGQRPNLERRATRESQAIPAPNVNTELVLSMEKKQSYSNSRSRSKKFNPHPEEAASGLPVDPPRPSQVEDLNVDHHPERAFHSGPLAHQAIPAISGKNQDAAALRSLTGADFSALSGIVAARRSMLASECRESSVSSSQTEAPQKIMDRFLMSFKETSGTLQDHQKCFKKEEGKLSSKNPVPIGYGSTGQKIHYSGPLLVQSGNMDQMLKDHDRQIQEAVRRAHIDKEKVRKVLS 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8962512 8967215 - Conep14aG0108400.1 Cone14ag1063 452912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1063 679 ProSiteProfiles Protein kinase domain profile. 125 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1063 679 CDD STKc_CDK9_like 125 409 - -
Cone14ag1063 679 SMART serkin_6 125 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1063 679 Gene3D Transferase(Phosphotransferase) domain 1 208 447 - -
Cone14ag1063 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1063 679 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524(InterPro)
Cone14ag1063 679 MobiDBLite consensus disorder prediction 418 514 - -
Cone14ag1063 679 MobiDBLite consensus disorder prediction 461 488 - -
Cone14ag1063 679 PANTHER CELL DIVISION PROTEIN KINASE 124 409 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone14ag1063 679 FunFam probable serine/threonine-protein kinase At1g54610 112 207 - -
Cone14ag1063 679 Pfam Protein kinase domain 125 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1063 679 SUPERFAMILY Protein kinase-like (PK-like) 119 417 IPR011009 -
Cone14ag1063 679 Gene3D Phosphorylase Kinase; domain 1 112 207 - -
Cone14ag1063 679 MobiDBLite consensus disorder prediction 428 455 - -
Cone14ag1063 679 FunFam probable serine/threonine-protein kinase At1g54610 208 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1063 Cone-Chr14:8962512 Cone19ag0681 Cone-Chr19:5761303 1.90E-222 dispersed
Cone10ag1351 Cone-Chr10:10524409 Cone14ag1063 Cone-Chr14:8962512 9.78E-222 wgd
Cone12ag1466 Cone-Chr12:10498908 Cone14ag1063 Cone-Chr14:8962512 1.25E-199 wgd
Cone14ag1063 Cone-Chr14:8962512 Cone6ag0146 Cone-Chr6:740829 0 wgd
Cone14ag1063 Cone-Chr14:8962512 Cone8ag1512 Cone-Chr8:11426498 3.22E-193 wgd
Cone14ag1063 Cone-Chr14:8962512 Cone9ag0171 Cone-Chr9:760275 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82107 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1063 - - - 0.0