Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1089 ATGGCCACTCAACAAGAGATTTCACATCCTTCACATCTAAACTTCACCATAGATGATCATCATACTAGCCATGATCATCGTAATGATAGTGATGAAGCACTAGAAGATGAAGAAGGAGTGGAAGGGGAAGAAGAAGAAGAAGAAGGAGAGGATCATCATATGGGGTCGGGCCGGAAGGGTTGGACACTCGGCCAAGTACTGGATCCGAGATCGAAATGGGTCCAAGAATGGAACCAGGTGTTTCTCCTCGTATGTGCAACCGGGTTATTCGTGGACCCGCTTTTCTTCTATGCCTTATCAATAAGTGAAACGTCCATGTGTCTCTTCATAGACGGGTGGTTCGCCATATCAGTGACGGTTCTCCGGTGCATGACGGACATATTGCACGTGTGGAACATGTGGTTACAATTCAAGATGGCTAAGAGGTCGTTCGCTTTAGGACTGATGGAAGGAAGTGGTGGATTAAAGGATACAAGCTCTCGTAATGTAGCTCTCAAGTACTTGAAGGCTAAAAAGGGCTTCTTCTTCGATCTCTTCGTTATTTTGCCCTTACCTCAGGTAGTATTATGGGTGGTAATTCCTTCGTTGCTGGAAAAAGGATGGGTAACGGTGGCAATGACAGTGTTTCTGATAATGTTTTTGTTTCAATATCTACCCAAACTGTATCACTCTGTCTGTCTCTTACGCCGCATGCAAAACTTCTCGGGCTACATCTTCGGCACTGTTTGGTGGGGTATTGCTCTTAACATGATTGCCTACTTTGTTGCTGCTCATGCCGCGGGAGCGTGTTGGTACTTATTGGGGATCCAAAGAGCAGAAAAATGCCTAAGAACACAATGCAGAGCGACGGAGGGTTGTGGTCTAAGAGTATTATCTTGTAAGGAAACCATATATTATGGAACAAGCAGTTTAGGGATGAGGGATAGAGCAAGATCGACTTGGGCTGTGAACAAACCAGCAAGGTCTACTTGCATAGATAGCTCGGATTTATATGACTATGGTGCTTATAAGTGGACCGTGCAGCTTGTTACTAACGATAGCCGTCTGGAGAAGATACTCTTCCCCATCTTTTGGGGCCTAATGACTCTTAGCACATTTGGAAACTTGGAGAGCACAACGGAGTGGCTAGAAGTAGTATTCAACATTATTGTTTTGACTAGTGGGCTACTTCTAGTGACCATGTTGATTGGAAACATCAAGGTGTTTTTACATGCAACGACATCAAAGAAACAGGCAATGCAGTTGAAGATGAGGAATATAGAATGGTGGATGAGGAAGAGGCGATTGCCGCAAGGGTTTAGACAGCGTGTACGCAACTATGAGCGACAAAGATGGGCTGCAATGCGTGGTGTTGATGAATGCGACATGATTCAGAACCTTCCGGAGGGCCTTAGGAGGGACATTAAGTACCATCTCTGTTTGGACTTGGTCAGGCAGGTTCCATTGTTCCAACACATGGATGATCTAGTTCTAGAGAACATTTGCGACCGAGTCAAATCCCTCATCTTCACAAAGGGTGAAACCATAACTAGAGAAGGGGACCCAGTTCAAAGAATGCTTTTCGTAGTTCGGGGCCACCTTCGAAGTAGCCAACTCCTCCGTGACGGCCTAAAAAGTTGTTGCATGTTGGGGCCCGGAAACTTCAGTGGTGATGAGCTTCTATCATGGTGTTTAAGACGCCCGTTTATTGAAAGACTCCCACCATCTTCATCAACCTTAGTCACTCTCGAAACAACTGAGGCTTTTGGACTTGAGGCTGAGGATGTCAAGTATGTCACACAACATTTCAGGTACACATTTGTGAACGAGAAAGTGAAGAGGAGTGCTAGATACTATTCACCCGGGTGGAGAACATGGGCTGCAGTGGCAATTCAGCTTGCTTGGAGGAGATATAAGCACCGTTTGACACTCACTTCCTTGAGTTTCATTAGGCCTAGGAGGCCTTTGTCTAGGTGCTCTTCAATGGGGGAAGATAGGCTAAGGCTCTATACGGCTTTGTTGACTTCTCCAAAGCCTAATCAAGATGACTTTGATTTTTGA 2040 45.44 MATQQEISHPSHLNFTIDDHHTSHDHRNDSDEALEDEEGVEGEEEEEEGEDHHMGSGRKGWTLGQVLDPRSKWVQEWNQVFLLVCATGLFVDPLFFYALSISETSMCLFIDGWFAISVTVLRCMTDILHVWNMWLQFKMAKRSFALGLMEGSGGLKDTSSRNVALKYLKAKKGFFFDLFVILPLPQVVLWVVIPSLLEKGWVTVAMTVFLIMFLFQYLPKLYHSVCLLRRMQNFSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRAEKCLRTQCRATEGCGLRVLSCKETIYYGTSSLGMRDRARSTWAVNKPARSTCIDSSDLYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECDMIQNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLRSSQLLRDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSMGEDRLRLYTALLTSPKPNQDDFDF 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9139951 9144499 + Conep14aG0111100.1 Cone14ag1089 452938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1089 679 MobiDBLite consensus disorder prediction 1 58 - -
Cone14ag1089 679 ProSiteProfiles cAMP/cGMP binding motif profile. 482 592 IPR000595 -
Cone14ag1089 679 Gene3D Helix hairpin bin 407 473 - -
Cone14ag1089 679 MobiDBLite consensus disorder prediction 13 33 - -
Cone14ag1089 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 57 636 - -
Cone14ag1089 679 MobiDBLite consensus disorder prediction 34 50 - -
Cone14ag1089 679 SUPERFAMILY Voltage-gated potassium channels 68 403 - -
Cone14ag1089 679 Gene3D Jelly Rolls 480 598 IPR014710 -
Cone14ag1089 679 FunFam Cyclic nucleotide-gated ion channel 1 409 473 - -
Cone14ag1089 679 CDD CAP_ED 482 588 IPR000595 -
Cone14ag1089 679 Pfam Cyclic nucleotide-binding domain 503 592 IPR000595 -
Cone14ag1089 679 SUPERFAMILY cAMP-binding domain-like 408 596 IPR018490 -
Cone14ag1089 679 FunFam cyclic nucleotide-gated ion channel 4 480 598 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1089 Cone-Chr14:9139951 Cone16ag0485 Cone-Chr16:6972025 2.66E-215 dispersed
Cone14ag1089 Cone-Chr14:9139951 Cone15ag1101 Cone-Chr15:9035099 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1089 K05391 - mdm:103430048 1124.38