Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1106 ATGGGCACTTTCTCTTTGAACCTCATCATCCTTTCCCATCTACTATTTTCTTTCTTCAAAATCTCAACTTCAATTCAGTCCATAACTCAATCCCAATCCCTCATAGATGGAAACACTACCTTACCTTCCGCGTCTCTTGTGACCTTCCCGGGTGGTTTTTGTGACACTTATGCCATCTGTGGCCCATACGGATATTGTGATCCCAGTAAATCACCTTCTTGCTTATGTTTACAAGGGTTCAAGGTGAAGTCTCAGGAAAAATGGAACGTGCTAGATTTTGTGGACGGGTGTGTAAGGGACAAGCCGTTGAATTGTTTGGAAAATGATGTCGGGTTTAGAAAGTTTTCGGAAATGAAAGCGCCGGCAATTATTAATACTACTTGGTTGAATAAGAGTATGAACATTCAGGAGTGTAGGATTAAGTGCCTCAGTAATTGTTCGTGTTCGGCTTACGGAAATTCAGATATTGGAGGGAGTGGAAGTGGTTGTGTTATTTGGTTTGGAGGTTTGCTTGATCTTAAGCTTGTTCTAAGTGGTGGGCAGGATGTATATGTTCGGATGCCGGCTTCAGAATTAAAATCGGAATCTAAGAAAGGGAAGAAGAATATTGGAGTGGCAATTGGTTGTGCCGTTGGTTCGATTTTTGCGGTCATCTTTATTGGATTTTGCATTTTTTGTAGAAAGAGGTCTAACTTCCAATCAAGCAAGGAAGAAAAAGACCACCTGGAGATTCCATTGTTTGACTTGTCCACCATAACTAGTGCTACTGATAATTTTTCAATCAACAAGAAGCTTGGGGAAGGTGGCTTTGGACCCGTATACAAGGGCAGACTACCAAATGGACAAGAAATCGCAGTGAAGCGGTTATCAAAGAATTCTGGACAAGGACAGAATGAGTTTAAGAATGAAGTGATATTAATAGCAAAACTTCAACACCGAAATCTCGTAAAGCTTCTTGGCTGCTGCATTCAGGGGGAGGAGAAAATGCTTATCTATGAATACATGCCGAACAGAAGCTTGGATGCCTTCATATTTGATCAAACACAAGGAAAACTATTAAATTGGGCTACACGGTTCCGTATTATTTGTGGGGTCGCTCGTGGACTTGTTTATCTTCATCAAGATTCGAGATTAAGGATAATACATAGAGATCTCAAAGCTAGCAATATCTTGCTCAACCTTGATATGAACCCGAAAATCTCGGATTTTGGTCTGGCTAGAATTTTCGGAGGAGATCAAACAGAAGCAAATACCAGAAGGGTTGTTGGAACTTATGGTTACATGGCACCGGAATACGCTATCGACGGACAATTCTCGGTAAAATCGGATGTCTTCAGTTTTGGAATCTTATTATTAGAGATAATAAGTGGCAAGAGAAATCAAGGACTTTATCGTCCGAATAATCACAATCTTAACCTTATCGCATACGCATGGAGATTGTGGAAAGATGGCCAACTTGCAGAACTGATTGATGAAACCTTTGGTGACTCATTTACATTCTCAGAAGTACTACGGTGCATCCATATCGGTCTCTTATGTGTTCAACAAGATCCTGAAGACCGGCCCACCATGCCGTCTGTGGTAATGATGTTAGGTAGTGAGAATAGTGTCTTGCCTCAACCTAAACAGCCGGGTTTCTCTATGGAGGGGGATTTTGGTGATAAGGATTTCCAATCCGGCCGCAATGAACAATTCAGTTCAACGAATGAAATGAGCATTACAATAATCCAGCCTAGATGA 1740 41.21 MGTFSLNLIILSHLLFSFFKISTSIQSITQSQSLIDGNTTLPSASLVTFPGGFCDTYAICGPYGYCDPSKSPSCLCLQGFKVKSQEKWNVLDFVDGCVRDKPLNCLENDVGFRKFSEMKAPAIINTTWLNKSMNIQECRIKCLSNCSCSAYGNSDIGGSGSGCVIWFGGLLDLKLVLSGGQDVYVRMPASELKSESKKGKKNIGVAIGCAVGSIFAVIFIGFCIFCRKRSNFQSSKEEKDHLEIPLFDLSTITSATDNFSINKKLGEGGFGPVYKGRLPNGQEIAVKRLSKNSGQGQNEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNRSLDAFIFDQTQGKLLNWATRFRIICGVARGLVYLHQDSRLRIIHRDLKASNILLNLDMNPKISDFGLARIFGGDQTEANTRRVVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIISGKRNQGLYRPNNHNLNLIAYAWRLWKDGQLAELIDETFGDSFTFSEVLRCIHIGLLCVQQDPEDRPTMPSVVMMLGSENSVLPQPKQPGFSMEGDFGDKDFQSGRNEQFSSTNEMSITIIQPR 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9218777 9222133 + Conep14aG0112800.1 Cone14ag1106 452955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1106 579 CDD STKc_IRAK 265 531 - -
Cone14ag1106 579 ProSiteProfiles Protein kinase domain profile. 259 538 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1106 579 CDD PAN_AP_plant 102 188 - -
Cone14ag1106 579 SUPERFAMILY Protein kinase-like (PK-like) 243 539 IPR011009 -
Cone14ag1106 579 SMART serkin_6 259 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1106 579 MobiDBLite consensus disorder prediction 559 579 - -
Cone14ag1106 579 Gene3D Transferase(Phosphotransferase) domain 1 335 540 - -
Cone14ag1106 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1106 579 Pfam PAN-like domain 105 173 IPR003609 -
Cone14ag1106 579 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 539 - -
Cone14ag1106 579 SMART ntp_6 107 187 IPR003609 -
Cone14ag1106 579 Pfam S-locus glycoprotein domain 47 83 IPR000858 GO:0048544(InterPro)
Cone14ag1106 579 MobiDBLite consensus disorder prediction 542 579 - -
Cone14ag1106 579 Pfam Domain of unknown function (DUF3403) 533 579 IPR021820 GO:0004674(InterPro)
Cone14ag1106 579 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 546 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone14ag1106 579 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 225 334 - -
Cone14ag1106 579 Pfam Protein tyrosine and serine/threonine kinase 260 529 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1106 579 ProSiteProfiles PAN/Apple domain profile. 105 188 IPR003609 -
Cone14ag1106 579 Gene3D Phosphorylase Kinase; domain 1 232 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1413 Cone-Chr12:10327058 Cone14ag1106 Cone-Chr14:9218777 1.32E-143 dispersed
Cone14ag1106 Cone-Chr14:9218777 Cone15ag1116 Cone-Chr15:9119105 0 dispersed
Cone14ag1104 Cone-Chr14:9211550 Cone14ag1106 Cone-Chr14:9218777 6.81E-266 proximal
Cone14ag1106 Cone-Chr14:9218777 Cone14ag1107 Cone-Chr14:9234126 2.68E-285 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82109 PF00651 BTB 5.50E-26 CL0033 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1106 - - - 0.0