Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1107 ATGGGCACTTACTCTTTGAAGCTCATCTTTCTAATAACCCACATACTCTTTTCTTTTTTCAAATTCTCGACTTCAATTGATTCCATAACTCAATCTCAATCACTCCTTGATGACGACACCACCTTAATTTCCAAAAACGGAACTTTTGAATTGGGTTTCTTTAGTCCCGGAAATTCTACAAACCGTTACATAGGAATATGGTACAAGTTCATTCCAATCAAAACCGTATTTTGGGTTGCGAATCGGAACAACCCAATCAACGATTCGTCTGGAGTTTTGGCAATGAACCAAACAGGAAATCTACTCCTCAATCAAAGCAACACTCTTGTCTGGTCAGCTAGACTGTTAAAACAACTCCGGAATCCGGTCTTACAGCTCTTAGATACCGGAAATCTTGTCCTAAGAGAAGAAAATGATGAAAACCCGGATAACTATTCTTGGCAAAGCTTTGACTATCCAACCGATACACTACTACCCGGGATGAAGCTTGGATGGGACTTGAAGAACAAAATTGATCGACGTGTTACAGCTTGGAAGAATCCAAACGACCCTTCTCCAGGAAATTTTTCTTGGGGAATGGAACTTCATAACTACCCGGAGACAGTTGCATGGATGGGTTCGAAAAAGTATGTTAGGTTCGGTCCTTGGAACGGCATAACGGTTAGTAGTATACAACCTAATGTTTCGCTACCTGTGAAAATCAATTCTACAGTGAACGATGATGAGGTTTATTATGATTATACCGTTTCAGATAAGTCGTTGACGGTTCTTATGGTATTGAATCAATCTAACAATATTCGTCATATCAACATATGGTCACCTGAAAAACAAATTTGGAGGCAATACTTGACTCGTCCAAGAGATCCTTGTGACAATTACGGCCTTTGTGGTCCTTATGGATATTGTGATGTGAGTAAGACACCTTATTGCATATGTTTAAAAGGGTTCAAGGCAAAATCGCCAGAGAAATGGAACTCGCTTCAGCCGAATTATACAGATGGGTGTGAAAGGGTAAAGCCATTGAGTTGTGCGGATAATGAAATCTGGTTTAGGAGAATTTCGGAGTTGAAAGTACCTGATACTACACGTACTTGGGTGAATAAGAGTATGAATCTTGAGGAGTGTAGGATTAAGTGTCTGAGTAATTGTTCATGTTCAGCTTATGGAAATACGGATATTAGGGGGAACGGAAGTGGTTGTGTTAATTGGTTTGGTGATATCATTGATCTTAGGGTTGTTCTGAGGGGTGGGCAGGATATACATCTTCGGATGCCAGCTTCCGAGTTAAGGTCAGACTCTAGTAAGGAGAAGATTGGAATGGCTATTGGTTGTGCCATTGCTGGAGTTTTGGCAATTCTCTTACTTGGGTTCTGCTTTTGTAGAAAAAAGGCTAATATCATGGGTAAAGAAGATAAACAAGGCTTGGAGCTCCCATTGTTTGATTTTTCCACCATAACTAGTGCCACTGATAACTTTTCGATCAACAATAAGCTTGGGGAAGGTGGCTTTGGACCTGTTTACAAGGGTAAACTAACAAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCAAAAAATTCTGGGCAAGGAATAAATGAATTTAAGAATGAAGTGACATTAATAGTGAAACTTCAACACCGGAATCTCGTAAATCTTCTCGGTTGTTGCATTCAGGGGGAGGAGAAAATGCTCATCTATGAATACATGCCGAACAAAAGCCTGGATACTTTCATCTTTGAACCAGGGAAACAATTAAATTGGTCAACATGGTACGGGATTATTTGTGGGGTCGCTCGGGGTCTTGTTTATCTTCATCAAGATTCAAGATTGAGGATAGTACATAGAGATCTCAAAGCCAGCAATGTCTTGCTCGACCTTGATATGAACCCAAAAATCTCGGATTTCGGAATTGCAAGAACATTTGGAGGGGATGAAACAGAAGCAAATACTAAAAGGGTGGTTGGAACTTATGGTTATATGGCACCGGAATATGCTATCGCTGGACAGTTCTCAGTAAAATCGGATGTATTTAGTTTTGGAATCTTATTATTGGAGATGATAAGTGGTAAGAGAAACCGAGGGTTTTATCGTCCGAATAACCACGACCTTAACCTTATCGGATATGCATGGAGATTGTGGAAAGAGGGCCGATCAGCTGAACTAATCGATGAAACCTTTGGCGACACATTACGAATGTTGGAAGTCTTACGGTGCATCCATATCGGTCTCTTATGTGTTCAACAACATCCTGAAGACCGGCCTACCATGTCATCTGTGGTTATGATGTTAAGCAACGAAAATAGTGTTTTGTCTCAACCTAAACAACCCGGTTTCTTTATCGAGGAAGGTTTTAGCAAGAAAGATTTTCGATCAAGCAACGATAACTTGACCTCGACGAACGAAATGACAATTACTGTACCCGAGGCTAGATGA 2430 40.45 MGTYSLKLIFLITHILFSFFKFSTSIDSITQSQSLLDDDTTLISKNGTFELGFFSPGNSTNRYIGIWYKFIPIKTVFWVANRNNPINDSSGVLAMNQTGNLLLNQSNTLVWSARLLKQLRNPVLQLLDTGNLVLREENDENPDNYSWQSFDYPTDTLLPGMKLGWDLKNKIDRRVTAWKNPNDPSPGNFSWGMELHNYPETVAWMGSKKYVRFGPWNGITVSSIQPNVSLPVKINSTVNDDEVYYDYTVSDKSLTVLMVLNQSNNIRHINIWSPEKQIWRQYLTRPRDPCDNYGLCGPYGYCDVSKTPYCICLKGFKAKSPEKWNSLQPNYTDGCERVKPLSCADNEIWFRRISELKVPDTTRTWVNKSMNLEECRIKCLSNCSCSAYGNTDIRGNGSGCVNWFGDIIDLRVVLRGGQDIHLRMPASELRSDSSKEKIGMAIGCAIAGVLAILLLGFCFCRKKANIMGKEDKQGLELPLFDFSTITSATDNFSINNKLGEGGFGPVYKGKLTNGQEIAVKRLSKNSGQGINEFKNEVTLIVKLQHRNLVNLLGCCIQGEEKMLIYEYMPNKSLDTFIFEPGKQLNWSTWYGIICGVARGLVYLHQDSRLRIVHRDLKASNVLLDLDMNPKISDFGIARTFGGDETEANTKRVVGTYGYMAPEYAIAGQFSVKSDVFSFGILLLEMISGKRNRGFYRPNNHDLNLIGYAWRLWKEGRSAELIDETFGDTLRMLEVLRCIHIGLLCVQQHPEDRPTMSSVVMMLSNENSVLSQPKQPGFFIEEGFSKKDFRSSNDNLTSTNEMTITVPEAR 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9234126 9237325 + Conep14aG0112900.1 Cone14ag1107 452956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1107 809 Gene3D - 22 150 IPR036426 -
Cone14ag1107 809 CDD STKc_IRAK 498 762 - -
Cone14ag1107 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1107 809 Pfam Protein tyrosine and serine/threonine kinase 493 761 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1107 809 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Cone14ag1107 809 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544(InterPro)
Cone14ag1107 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Cone14ag1107 809 ProSiteProfiles Protein kinase domain profile. 492 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1107 809 SUPERFAMILY Protein kinase-like (PK-like) 476 775 IPR011009 -
Cone14ag1107 809 SMART serkin_6 492 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1107 809 SMART ntp_6 345 424 IPR003609 -
Cone14ag1107 809 SMART blect_4 33 153 IPR001480 -
Cone14ag1107 809 CDD B_lectin 35 153 IPR001480 -
Cone14ag1107 809 Pfam D-mannose binding lectin 75 179 IPR001480 -
Cone14ag1107 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 770 - -
Cone14ag1107 809 Gene3D Transferase(Phosphotransferase) domain 1 568 774 - -
Cone14ag1107 809 Gene3D Phosphorylase Kinase; domain 1 466 567 - -
Cone14ag1107 809 Pfam PAN-like domain 343 410 IPR003609 -
Cone14ag1107 809 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Cone14ag1107 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 458 567 - -
Cone14ag1107 809 PIRSF SRK 1 809 IPR024171 GO:0004674(InterPro)
Cone14ag1107 809 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 777 - -
Cone14ag1107 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Cone14ag1107 809 CDD PAN_AP_plant 340 425 - -
Cone14ag1107 809 Pfam Domain of unknown function (DUF3403) 764 809 IPR021820 GO:0004674(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1107 Cone-Chr14:9234126 Cone15ag1122 Cone-Chr15:9148354 0 dispersed
Cone14ag1106 Cone-Chr14:9218777 Cone14ag1107 Cone-Chr14:9234126 2.68E-285 tandem
Cone14ag1107 Cone-Chr14:9234126 Cone14ag1108 Cone-Chr14:9240331 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82110 PF00069 Pkinase 3.20E-67 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1107 - - - 0.0