Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone14ag1108 | ATGAAGCTTGGATGGGACTTGAAGAACAAAATCGATCGACGTGTTACAGCTTGGAAGAATCCAAATGACCCTTCTCCTAGAAATTTTTCTTGGGCAATGGAACTTCATAACTACCCCGAGACAGTTACATGGATGGGTTCGAAAGAGTACATTAGGGGCGGTCCTTGGAACGGCATAACCGTTACTAGTAAACCACCTAGCTCTTTGCCACTATTGGAGTACAATTCTATTGCGAACGATAATGAGGTTTATCTCAGTTATACCATTCCGAATAAGTCGTTGACGGTTCTTATGGTAATGAATCAATCTACCAATATGCGTGACATCAACATATGGTCACCCGAAAAACAAATTTGGAGGCTATACGCAACTCTCCCGAGAGATCCTTGTGACAGTTACGCCCTTTGTGGGCCGTATGGATATTGTGATGTGAGCAAGACACCTAGTTGTGTATGTTTACAAGGGTTCAAGGCCAAATCGCCCGAGATATGGAACTCGGTTCAGCCGAATTATACAGATGGGTGTGAAAGGGTGAAGCCATTGAGTTGTGCAGATAATGATATCGGATTTAGGAGAATTACAGAAATTAAAGCACCTGATACTACACGTACTTGGGTAAATAACAGTATGAATCTTGAGGAGTGTAGGATTAAGTGTCTGAGTAATTGTTCGTGTTCGGCTTATGGAAATACGGACATTAGCGGGAGCGGAAGTGGTTGTGTTAATTGGTTTGGCGATATAATTGATCTTAAGGTTATTCCGGATGGCGGGCAGGATATATATCTTCGGATGCCGGCTTCAGAATTAAGGTCAATCTCTAATACGGAGAAGATTGGAGTGACAATTGGTTGTGCCATTGCTGGAGTTTTGGCAATTCTCTTACTTGGGTTCTGCTTTTGGAGAAAAAAGGCTAACATCATATGTAAAGAAGATAAAGAAGATTTGGAGCTCCCATTATTTGATTTGTCCACCATAACTAGTGCCACTGATAACTTTTCGATCAACAATAAGCTTGGGGAAGGTGGCTTTGGACCTGTTTACAAGGGAAGACTAGCAAATGGACAAGAAATCGCAGTGAAGAGGCTATCAAAAAATTCTGGACAAGGACAAAATGAGTTTAAGAATGAAGTGATATTAATAGCAAAACTTCAACACCGTAATCTAGTAAAGCTTCTTGGCTGCTATATTCAGGGCGAGGAGAAAATGCTCATGTATGAATACATGCCAAACAAAAGCTTGGATGCTTTCATATTTGATCAAGCACATGGAAAACAATTAAGTTGGTCCACATGTTTCCAAATTATTTGTGGGGTCTCTCGAGGGCTTGTTTATCTTCATCAAGATTCGAGATTGAGGATAATACATAGAGACCTTAAAGCGAGCAATGTCTTGCTCGACCTTGATATGAACCCGAAAATCTCGGATTTCGGAATTGCAAGAACTTTCGGAGTGGATGAAACGGAAGCAAATACCAAGAGTGTGGTTGGAACTTACGGTTACATGGCACCAGAATATGCTATCGACGGACATTTCTCAATCAAATCGGATGTCTTTAGTTTTGGAATCTTATTATTGGAGATGATAAGTGGAAAAAAAAATCGGGGATTTTATCGTCCGAATAACCCCGACCTTAACCTTATCGGATACGCATGGAGTTTGTGGAAAGAGGGCCAACCGGCCGAACTGATCAATGAAACCTTTGGTGACTCATTGACAATGTCAGAAGTTCTACGGTGCATCCATATCGGTCTCTTATGTGTTCAACAACATCCTGAAGACCGGCCCACCATGTCAACAGTGGTTATGATGTTAAGCAATGAGAATAGTGTCCTGTTTCCACCTAAACAACCAGGTTTCTTCATGGAGGAGGATTTTGGCGAGAAACATTTTCGATCGAATACGACGAATGAAATGACCATTACAATACTCGAGGCTAGATGA | 1941 | 41.37 | MKLGWDLKNKIDRRVTAWKNPNDPSPRNFSWAMELHNYPETVTWMGSKEYIRGGPWNGITVTSKPPSSLPLLEYNSIANDNEVYLSYTIPNKSLTVLMVMNQSTNMRDINIWSPEKQIWRLYATLPRDPCDSYALCGPYGYCDVSKTPSCVCLQGFKAKSPEIWNSVQPNYTDGCERVKPLSCADNDIGFRRITEIKAPDTTRTWVNNSMNLEECRIKCLSNCSCSAYGNTDISGSGSGCVNWFGDIIDLKVIPDGGQDIYLRMPASELRSISNTEKIGVTIGCAIAGVLAILLLGFCFWRKKANIICKEDKEDLELPLFDLSTITSATDNFSINNKLGEGGFGPVYKGRLANGQEIAVKRLSKNSGQGQNEFKNEVILIAKLQHRNLVKLLGCYIQGEEKMLMYEYMPNKSLDAFIFDQAHGKQLSWSTCFQIICGVSRGLVYLHQDSRLRIIHRDLKASNVLLDLDMNPKISDFGIARTFGVDETEANTKSVVGTYGYMAPEYAIDGHFSIKSDVFSFGILLLEMISGKKNRGFYRPNNPDLNLIGYAWSLWKEGQPAELINETFGDSLTMSEVLRCIHIGLLCVQQHPEDRPTMSTVVMMLSNENSVLFPPKQPGFFMEEDFGEKHFRSNTTNEMTITILEAR | 646 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 9240331 | 9243715 | + | Conep14aG0113000.1 | Cone14ag1108 | 452957 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone14ag1108 | 646 | ProSiteProfiles | PAN/Apple domain profile. | 183 | 265 | IPR003609 | - | |
| Cone14ag1108 | 646 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 453 | 465 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone14ag1108 | 646 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 611 | - | - | |
| Cone14ag1108 | 646 | Pfam | Domain of unknown function (DUF3403) | 606 | 646 | IPR021820 | GO:0004674(InterPro) | |
| Cone14ag1108 | 646 | Pfam | S-locus glycoprotein domain | 52 | 159 | IPR000858 | GO:0048544(InterPro) | |
| Cone14ag1108 | 646 | Pfam | PAN-like domain | 183 | 250 | IPR003609 | - | |
| Cone14ag1108 | 646 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 408 | 612 | - | - | |
| Cone14ag1108 | 646 | Gene3D | Phosphorylase Kinase; domain 1 | 306 | 407 | - | - | |
| Cone14ag1108 | 646 | SMART | ntp_6 | 185 | 264 | IPR003609 | - | |
| Cone14ag1108 | 646 | SMART | serkin_6 | 332 | 611 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone14ag1108 | 646 | Pfam | Protein tyrosine and serine/threonine kinase | 333 | 603 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone14ag1108 | 646 | CDD | PAN_AP_plant | 180 | 265 | - | - | |
| Cone14ag1108 | 646 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 299 | 407 | - | - | |
| Cone14ag1108 | 646 | CDD | STKc_IRAK | 338 | 604 | - | - | |
| Cone14ag1108 | 646 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 1 | 618 | - | - | |
| Cone14ag1108 | 646 | ProSiteProfiles | Protein kinase domain profile. | 332 | 611 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone14ag1108 | 646 | SUPERFAMILY | Protein kinase-like (PK-like) | 315 | 620 | IPR011009 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone14ag1108 | Cone-Chr14:9240331 | Cone15ag1122 | Cone-Chr15:9148354 | 0 | dispersed | |
| Cone14ag1107 | Cone-Chr14:9234126 | Cone14ag1108 | Cone-Chr14:9240331 | 0 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 82111 | PF00069 | Pkinase | 3.20E-67 | CL0016 | Cone | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone14ag1108 | - | - | - | 0.0 |