Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1118 ATGGCAACAGTGTGGGTCTCTTTGAAAAATTCATTAGATTGCAAATCAGGTGATGCATCAGATGTTCATGACCCACAAACCAGAAAGCAGTACTTAACCAGAATCTTGACCGGAAAAGATGGGAGGAAGTCGGGAAGATCATCATCAGGTTGTTCAAGGTCAATAGCAAATCTCAGACATGCCATCCGTGGAGTTGGAAGTAGTAATTACAAGAGAGGTCACTTTGAAGAAAAAGAAGAAGAAAAGAAGGCATCAGCTTGCAGTCCAAGATCTATAGGAAGCAATGAGCTCCTCAATCCAATAAGACATGAAGTCATTTTAAGCAATTCAACGTGTGAGCTCAAAATCACCGGTTTCGGTGGCAGTCTCGGCGGCAGTGGAGGTGGCAATGATGGTGGGTCCACCTTTGTGGGTACTTTAAGGCCAGGGACACCTGGTCCTGGAGGACACCCAACAATGCACTACTTCAATCATTTTTCATCTTCTTATAGGACCTCATCAAGTACTACTAATCCTAGAAAGTTCCTTGGCGGTGGTTGTGGTGGTGGTGGCTCTGCCAAATTCGGTTTCGGTGGCTCTTATGGTGGTGGAGGAGCAGATTGTGGTGGTTATCAATTCAATTGTCATAAATGTGGAGAGCAGTTTAACAAATGGGATGCTGCTGAATCACATCATCTTTCTAAACATGCTGTTACAGAACTAGTGGAAGGAGATTCATCAAGGATGATAGTTGAGATAATATGCCAAACAAGTTGGCTAAAATCCGAGAATCATTGCGGTCGAATCGAGAGGATATTAAAAATTCACAACATGCAAAGAACCCTAGTTAGATTCGAAGAACATAGAGAAATGGTGAAAAGCAAAGCAAGCAAACTACCAAAAAAACATCCTCGTTGCTTAGCAGATGGTAACGAGCTCTTAAGATTTTATGGCACCACTTTATCATGCTCTCTTGGCTTAAACGGAAGCTCAAATCTATGCATTTCGGAAAAATGCCGTGTTTGTAGGATAATACAAAACGGGTTTGCTTCGAAAACGGAAATGAGGCAAGGAATTGGGGTTTTCACAACTTCAACAAGTGGGAGAGCTCTTAACTCCATTGAAATGGTTGAAGAAGAAAAAGGAGGAGAACGTTTATTTTCGAGGAGAAAGGCTTTGGTTGTATGCAGAGTTATTGCCGGTAGAGTTCATAAGCCTTTGGAGAATGTTAAAGAAATGGTGAGTCAATCTGGGTTTGATTCACTGGCTGGAAAAATTGGTTTGCATTCTAATATTGAAGAGCTTTATTTGCTCAATCCTAGAGCTTTGCTTCCTTGTTTTGTTGTAATATGCAAACCTTGA 1341 41.54 MATVWVSLKNSLDCKSGDASDVHDPQTRKQYLTRILTGKDGRKSGRSSSGCSRSIANLRHAIRGVGSSNYKRGHFEEKEEEKKASACSPRSIGSNELLNPIRHEVILSNSTCELKITGFGGSLGGSGGGNDGGSTFVGTLRPGTPGPGGHPTMHYFNHFSSSYRTSSSTTNPRKFLGGGCGGGGSAKFGFGGSYGGGGADCGGYQFNCHKCGEQFNKWDAAESHHLSKHAVTELVEGDSSRMIVEIICQTSWLKSENHCGRIERILKIHNMQRTLVRFEEHREMVKSKASKLPKKHPRCLADGNELLRFYGTTLSCSLGLNGSSNLCISEKCRVCRIIQNGFASKTEMRQGIGVFTTSTSGRALNSIEMVEEEKGGERLFSRRKALVVCRVIAGRVHKPLENVKEMVSQSGFDSLAGKIGLHSNIEELYLLNPRALLPCFVVICKP 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9313725 9315485 - Conep14aG0114000.1 Cone14ag1118 452967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1118 446 ProSitePatterns Zinc finger C2H2 type domain signature. 208 229 IPR013087 -
Cone14ag1118 446 MobiDBLite consensus disorder prediction 69 93 - -
Cone14ag1118 446 MobiDBLite consensus disorder prediction 70 86 - -
Cone14ag1118 446 SUPERFAMILY ADP-ribosylation 231 445 - -
Cone14ag1118 446 Gene3D - 233 445 - -
Cone14ag1118 446 FunFam C2H2-like zinc finger protein 230 445 - -
Cone14ag1118 446 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1118 Cone-Chr14:9313725 Cone17ag1266 Cone-Chr17:9127782 2.45E-72 dispersed
Cone14ag1118 Cone-Chr14:9313725 Cone15ag1134 Cone-Chr15:9227314 3.47E-154 wgd
Cone14ag1118 Cone-Chr14:9313725 Cone6ag0092 Cone-Chr6:446661 2.85E-180 wgd
Cone14ag1118 Cone-Chr14:9313725 Cone9ag0108 Cone-Chr9:469629 2.68E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44792 PF01595 DUF21 2.70E-19 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1118 - - - 0.0