Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1133 ATGAGCTGCTTCAGATGTTGTGTGTCGCAGGAGAAAATTAACAGGAGATCATTGAAGAGGAGCATCAAGGAGTATCATGACACCAAAACTTTGGCCTCATTTGCTAATATCTCCTTCAAATCTGACAGCAGTAGGCGAAGATATATAACCGAAGAGATAAAGAAGATTGGGAAAGGAAACATTTCAGCTAAGATCTTCACCTTCCGCGAGCTAAATGTTGCGACGAACAACTTCAGCACTGACAATCTTATAGGAGAAGGAGGCTTTGGAAGAGTTTACAAAGGCCATCTTGAACACATGAATCAAACTGTTGCTGTTAAGAAACTTGACAGAAATGGGTTTCAAGGAAACAGAGAATTTCTAGTAGAAGTTCTGATGTTGAGTCTTCTTCACCACCCTAACCTTGTCAATTTGGTCGGATATTGTGCTGATGGTGACCAGAGGATTTTGGTTTATGAGTACATGGCTAATGGTTCCCTTGAAGATCATCTTCTCGAATTAGGTGCGGATAAGAAGCCTCTCGATTGGAATACGAGGATGAAAATTGCGGAAGGTGCAGCAAGAGGGCTCCAGTACTTGCACGAAACAGCCAATCCCCCTGTAATATACCGAGATTTCAAAGCATCAAACATTTTATTGGACGAAAATTTCAACCCGAAACTGTCTGATTTTGGGCTGGCAAAGTTGGGTCCCACGGGGGATAACACCCATGTCTCCACAAGAGTTATGGGAACCTACGGCTATTGTGCTCCTGAGTATGCTCTTACCGGACAACTGACCACAAAATCAGATGTATACAGCTACGGAGTTGTGTTTTTGGAGATAATTACTGGAAGGAGAGTTATAGACAATGCAAGACCTACCCAAGAGCAGAATCTAGTGACTTGGGCACAACCCCTATTCAAAGACAAGAGGAAGTTCACATTGATAGTGGATCCATTGCTAGAGAGTGATTACCCTGTAAAGGCTCTATATCAAGCTCTAGCAGTTGCAGCCATGTGTCTCCAAGAAGAAGCAAGCACTCGGCCTTTGATTAGCGATGTGGTTATTGCTCTCGAATATTTATCCGGAAATAAGACCGACGAGGTTGTGGGAGGAGAAGAGAATAATGGTGAAGGGAAATAA 1125 43.02 MSCFRCCVSQEKINRRSLKRSIKEYHDTKTLASFANISFKSDSSRRRYITEEIKKIGKGNISAKIFTFRELNVATNNFSTDNLIGEGGFGRVYKGHLEHMNQTVAVKKLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMANGSLEDHLLELGADKKPLDWNTRMKIAEGAARGLQYLHETANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDNTHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSYGVVFLEIITGRRVIDNARPTQEQNLVTWAQPLFKDKRKFTLIVDPLLESDYPVKALYQALAVAAMCLQEEASTRPLISDVVIALEYLSGNKTDEVVGGEENNGEGK 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9414814 9417130 - Conep14aG0115700.1 Cone14ag1133 452982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1133 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1133 374 CDD STKc_IRAK 84 353 - -
Cone14ag1133 374 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524(InterPro)
Cone14ag1133 374 PANTHER OS07G0668900 PROTEIN 43 361 - -
Cone14ag1133 374 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Cone14ag1133 374 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1133 374 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Cone14ag1133 374 Gene3D Transferase(Phosphotransferase) domain 1 155 370 - -
Cone14ag1133 374 Pfam Protein kinase domain 80 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1133 374 SUPERFAMILY Protein kinase-like (PK-like) 61 353 IPR011009 -
Cone14ag1133 374 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1133 Cone-Chr14:9414814 Cone7ag0170 Cone-Chr7:711534 1.83E-163 dispersed
Cone7ag1127 Cone-Chr7:8486782 Cone14ag1133 Cone-Chr14:9414814 3.99E-97 dispersed
Cone8ag0647 Cone-Chr8:6434382 Cone14ag1133 Cone-Chr14:9414814 1.84E-78 dispersed
Cone14ag1133 Cone-Chr14:9414814 Cone15ag1154 Cone-Chr15:9341508 7.77E-257 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82112 PF00899 ThiF 2.50E-70 CL0063 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1133 - - - 0.0