Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone14ag1147 | ATGGAGAAGATCATTAGCAAGACAAGACAATGGAGTTTAGTGTTTGGATCGCTTGTGTTTGTGTTGCTTTTTATGCTTTCACAGGGCAACATAAGCACATCAACGTGGGCACCAGAAGTTATGCTACGAACTCTTCCAAATCACCATCATCATCATCATTCTCATTCTCAAAATCACGTGGTGATGGACAATGGATTGATTCAAGTTACTTTGTCACATCCTGATGGTGATGTAGTAGGAATTAAATATAATAGCATCGATAATTTACTTGAGATTCACAATCCCGAAGATAATAGAGGATATTGGGATATCGTTTGGAGTAGAGACGGACAACTTGGCCCTCTTGCCAAATTATATGGAACCGAATTTAATGTCATAACGTCCAACGAAGAACAAGTAGAGCTTTCCTTTACCAAAACATGGACGGTTTCAGATGGCAATCAAACAATTCCTTTAAATGTTGATAAGAGATACATTATCCGTCGAGGTGTATCCGGATTTTACACATATTCCATATTGGAGCGTTTGGAAGGATTCCCAGCTGTTGAGATGAGTCAAATGACACTTGTTTTCAAGCTCCAAAACAATAAGTTTCACTATATGGCTGTCTCAGATAATAGACAAAGGATCATGCCAACTCCAAGAGATCGTGAGACGGGTGAACGTCTTGATTATAAAGAAGCTGTTCTTTTAACCAATCCCAGTGATGAAAGACTTAAAGGAGAGGTAGATGACAAATATCAATACACATGTGAGACTAAAGATAACAAACTTCATGGATGGATGTCTACTGATCCATCTGTTGGATTTTGGATGATCACACCTAGTGATGAGTTTCGTACTGGTGGACCGATGAAGCAAGTTCTTACCTCTCATGTGGGCCCAACAACCCTAGCTAGTTTTGCGAGCACCCATTATATTGGACCGGAATTGGCGATGAGATTTGAAGAAGGAGAATCATGGAAGAAGGTTTTTGGGCCTTTTTTCATATATCTAAATTCTGATAATTCTCATAATGAAGAAGAAGCTTTCAAAAATCTCTGGAAAGATGCTAAAAATCAGATGTCAACTGAAGTTAGTAGATGGCCGTATAACTTCCCGCAATCAAAAGACTTCCCTTCTTCTGACCAACGAGGAAGAGTTACCGGACAATTGATTGTCGATGACAACTATTTGAGCAATAGACAAATATTGGCCAATGATGCCTTCATCGGTTTGGCAAAACCCGGAGAAGTAGGATCGTGGCAAACGGATCAATGCAAGGGTTATCAATTTTGGACTCGTACTGACAAAAATGGGAATTTCTCAATAAACAATGTTCGAGAAGGAAGCTATAACTTATATGCTTGGGTCCCCGGCATTCTTGGAGATTATAAATATGAAGCCAACATTACAATTACACCCGGTAGTAAAATTGATTTGGACACTATAGTGTTTAGGCCACCGAGAATGGGTACCACACTTTGGGAAATAGGTATTCCTGATCGTACCGCTGCTGAATTCTATGTTCCGGATTCGTACCCAGAACTTCCGAATCATTTGTTCGATAATCATACCGACAAGTTCAGACAATATGGTTTATGGAAGCGCTATACAGATTTATATCCCAACAAGGATCTCGTGTATACAGTTGGTGTTGATGACTATCGTAAGGATTGGTTCTACGCTCAAGTTGCAAGGGATACTGGAAATGGATCATTTGTTGGAACTACCTGGCAGATAAACTTTCAACTTGAAAATGTTGATTATGCTGGAACTTATACACTCCAATTAGCATTAGCTTCAGCTTCCTATTCTCACTTACAGGTGAGAATTAACAATCCAAATGTTAGGAGACCACTTTTTTCGACTGGAAGAATAGGAAGGGATAATGCTATAGCAAGGCATGGAATTCATGGACGTTATTGGTATTTCAGCGTCCAAGTTTCAGGTTATCTACTTGCTCCGGGCAATAACGTAATCTATCTCACTCAACCTAAACATGATAGTCCATTTACTGGAATCATGTATGATTACATTCGTCTTGAGGCCCCATCCTTATAA | 2043 | 39.45 | MEKIISKTRQWSLVFGSLVFVLLFMLSQGNISTSTWAPEVMLRTLPNHHHHHHSHSQNHVVMDNGLIQVTLSHPDGDVVGIKYNSIDNLLEIHNPEDNRGYWDIVWSRDGQLGPLAKLYGTEFNVITSNEEQVELSFTKTWTVSDGNQTIPLNVDKRYIIRRGVSGFYTYSILERLEGFPAVEMSQMTLVFKLQNNKFHYMAVSDNRQRIMPTPRDRETGERLDYKEAVLLTNPSDERLKGEVDDKYQYTCETKDNKLHGWMSTDPSVGFWMITPSDEFRTGGPMKQVLTSHVGPTTLASFASTHYIGPELAMRFEEGESWKKVFGPFFIYLNSDNSHNEEEAFKNLWKDAKNQMSTEVSRWPYNFPQSKDFPSSDQRGRVTGQLIVDDNYLSNRQILANDAFIGLAKPGEVGSWQTDQCKGYQFWTRTDKNGNFSINNVREGSYNLYAWVPGILGDYKYEANITITPGSKIDLDTIVFRPPRMGTTLWEIGIPDRTAAEFYVPDSYPELPNHLFDNHTDKFRQYGLWKRYTDLYPNKDLVYTVGVDDYRKDWFYAQVARDTGNGSFVGTTWQINFQLENVDYAGTYTLQLALASASYSHLQVRINNPNVRRPLFSTGRIGRDNAIARHGIHGRYWYFSVQVSGYLLAPGNNVIYLTQPKHDSPFTGIMYDYIRLEAPSL | 680 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 9495685 | 9499164 | - | Conep14aG0117100.1 | Cone14ag1147 | 452996 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone14ag1147 | 680 | SUPERFAMILY | Galactose mutarotase-like | 54 | 339 | IPR011013 | GO:0003824(InterPro)|GO:0005975(InterPro)|GO:0030246(InterPro) | |
Cone14ag1147 | 680 | Pfam | Polysaccharide lyase family 4, domain II | 401 | 473 | IPR029413 | - | |
Cone14ag1147 | 680 | CDD | RGL4_C | 489 | 676 | - | - | |
Cone14ag1147 | 680 | Pfam | Polysaccharide lyase family 4, domain III | 487 | 675 | IPR029411 | - | |
Cone14ag1147 | 680 | Gene3D | - | 374 | 476 | - | - | |
Cone14ag1147 | 680 | Gene3D | - | 484 | 676 | - | - | |
Cone14ag1147 | 680 | CDD | RGL4_N | 58 | 337 | - | - | |
Cone14ag1147 | 680 | Gene3D | - | 51 | 345 | IPR014718 | GO:0030246(InterPro) | |
Cone14ag1147 | 680 | SUPERFAMILY | Starch-binding domain-like | 376 | 478 | IPR013784 | GO:0030246(InterPro) | |
Cone14ag1147 | 680 | SUPERFAMILY | Galactose-binding domain-like | 485 | 676 | IPR008979 | - | |
Cone14ag1147 | 680 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 51 | 679 | IPR051850 | - | |
Cone14ag1147 | 680 | FunFam | Rhamnogalacturonate lyase B | 374 | 474 | - | - | |
Cone14ag1147 | 680 | Pfam | Rhamnogalacturonate lyase family | 52 | 243 | IPR010325 | - | |
Cone14ag1147 | 680 | CDD | RGL4_M | 377 | 477 | IPR029413 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag1147 | Cone-Chr14:9495685 | Cone4ag1283 | Cone-Chr4:10549015 | 2.35E-277 | dispersed | |
Cone14ag1147 | Cone-Chr14:9495685 | Cone6ag1513 | Cone-Chr6:11957773 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone14ag1147 | K18195 | - | csv:101215252 | 836.254 |