Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1152 ATGGGCCAGATCGTAAAGAGGAAGAAGAAAGGCAGGCCATCCAAGGCAGATCTGGCTCGCCGCGCCGGAGATTCGCCGGCGATGTTCGAACCGGTCATGCGACGGAGTTTACGGCGCCGAAATGTGAGGTACAACATCGATATTGACGATTATCTAGACGAGGACGAAGAAGAAGACGAAGAGGATGAGAGGAGGAGGTTGAGGAAGCTGAAGCTCGTGGTGAAGCTGAACCAAGTCAAAGATGGAGCTGAGACGGAGAATGGTCGAGCACGGACGAAGTCGCGTTCGTCACACGCGCATGAGTACGTCGAGTCCGCTTCAGAAGAGGAGGATGATGAGTCTGAGAGGAGGCCATTAAAGAAGAGGATGATTGGCCGCAGTGGTGAAGAAGACGATGCGGAAGAAGAAGAAGATGATGTCTACGATGACGAAAATCGTGGTGAGGAAGACGGAGATGATGACGGTTTTGAGGAAAGGGGAGGAAGGAAGGTCGGCTCAAAAGGTTCCGACTCTGTTCCAGGAACGCCATCCGATTCCCCAAATGGGACAATACCATTACCTGATAAGAGAATATTAGAGTTAATTCTTGACAAATTGCAGAAGAAAGACACATATGGTGTATATGCTGAACCAGTGGATCCCGAAGAGCTTCCGGATTATCATGATGTGATTGAGCATCCAATGGACTTTGCTACAGTGAGGAAGAAGTTGTCTAATGGTGCATACTCAACTTTGGAAGACTTTGAGAGTGACGTGTTCCTCATTTGCTCAAACGCAATGCAATATAATTCGTCAGACACCGTATATCATAAGCAGGCATTTGCAATACAAGAACTAGCAAAGAAGAAATTTGGAAGGTTAAGAACCAATTTTGAAAGCTCTGAAAAGGAGCTGAAGCTGGAGCAAAAAATAAAGACCAATTTTTCTGAGAAGAAGCAAACAAGGAAGCCTTTGTGTAGGACCTCACAAGAACCCATTGGGTCCGATTTCTCCTCAGGTGCCACTCTTGCCACTACAACAGGTATTCCAAACATATCCAATGGGACACCTTTTGGGGCTGGTTATGAAAGACCAAACAACATTGATGGGTTCGTTGAGAGTAATTCTTCCCCATTTGATACGAATCTGGAGAAGACAGAGGAACAGTTATCAGGTAAAAGCTTCTTACCTAGATTAGGCAGGAAGCTGATGCTTGATGAAAACCGCCGATCAACATACAATACTTCCAATCAACCAGTTATCCAATCAGACTCAACATTTGCAACATTTGAGGGTGAAATTAGGCAACTTGTTGCGGTTGGGCTTCATGCTGAATATTCCTATGCACGGAGCCTAGCCCGTTTTTCTGCAACTTTGGGCCCTGTTGCTTGGAAAGTTGCCTCCAAGAGAATCGAGCAAGCGCTACCTTCTGGCTATAAATTTGGCCGTGGTTGGGTTGGAGAATACGAGCCACTCCCAACCCCGGTTTTGATGCTTGAAAACCGTAACCAAAAGGAGACCAATTTATTTACCCATGCTCCATCTCCTACTGAGTTGAAAAAGGACGATAAATCCATAAAGGACCCTTTTCCTACCAAAAAAGATAATTGTCATCCAGTTAGTGGGCTCAATCCAGAATCAAGACCATCTTTATATAATTCTCCTAGGGGCCATACTTCAGATAGGAAACCACCCTTGTTTTCCTCTAATGGAACAAGATCCAATCCCCCAATAGATATACCTTCTAAGAATTTTACAGAGCCCGAGAAGATGAAAAAGCAAATTGAATTAAACCTCTTGCCCTCACCCAATCAGAATAGCCGACGTATGCCTTTTTCCAAATCCAATGATTGGCAGCCACCCATGAATTTCAATAAGCTGCCAGATTCTAATGGAGCTGTTGTTACTACTACTATCACTACTACTACTAGGGGTTTGCCTAATGGTAAAGTAGCCACTACTCCGTCTTCTAATAATGGTCCTAGTCACATTTTCCAAGTAACACCTAGCTATCCCCATGGTCCGGAGCAAGGTAATGGTCTCTCTGACCCGGTTCAGTTAATGAGATTGTTATCCGAAAATGCTCAAAAGCAACAGAAAAAACCTCCAAACCAGTCTGCAATTGAAGCTCCTCATCCTCCTCCTCCAGCCCCACCTCAATTGAACTTACCAACCCCACCACCTATGAGAAGGGATGATTCTGGAAATGCTGCAGCAGCAGCTGCCCGTGCTTGGATGTCCATAGGAGCTGCAGGATTAAAAAAAGTAACGGAAAATCACATTTCTGCTGATTCAATATATAATGCAGCTAGAGAATTTCATCCGCAAAATACTCGTATATCTTCTTCCTCGGAAAATAAGAATAGTTTTCCATTACAGGCATATAATGTGCCACCACAGCCCACTCAGCCTACCCATTTGCAAAATAACAGACCGATGATCTTCTCTCATTTTGGCTCGCCTGCTGATTTGTCCAAGTTTCAGGTACAATCAACTTCTTCCCCTTCTTGGAGAGGGCTTAGCCCTCATACCCAGATGAGGCAAAAGCAAGATATGTGCCCTCCTGATTTGAATATTGGTTTTCAATCTCCTGGGTCTCCTCCAAGACAATCTAATGGAGTTATAGTCGATTCTCAGCAGCCGGACCTGGCTTTGCAACTTTGA 2643 44.84 MGQIVKRKKKGRPSKADLARRAGDSPAMFEPVMRRSLRRRNVRYNIDIDDYLDEDEEEDEEDERRRLRKLKLVVKLNQVKDGAETENGRARTKSRSSHAHEYVESASEEEDDESERRPLKKRMIGRSGEEDDAEEEEDDVYDDENRGEEDGDDDGFEERGGRKVGSKGSDSVPGTPSDSPNGTIPLPDKRILELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLSNGAYSTLEDFESDVFLICSNAMQYNSSDTVYHKQAFAIQELAKKKFGRLRTNFESSEKELKLEQKIKTNFSEKKQTRKPLCRTSQEPIGSDFSSGATLATTTGIPNISNGTPFGAGYERPNNIDGFVESNSSPFDTNLEKTEEQLSGKSFLPRLGRKLMLDENRRSTYNTSNQPVIQSDSTFATFEGEIRQLVAVGLHAEYSYARSLARFSATLGPVAWKVASKRIEQALPSGYKFGRGWVGEYEPLPTPVLMLENRNQKETNLFTHAPSPTELKKDDKSIKDPFPTKKDNCHPVSGLNPESRPSLYNSPRGHTSDRKPPLFSSNGTRSNPPIDIPSKNFTEPEKMKKQIELNLLPSPNQNSRRMPFSKSNDWQPPMNFNKLPDSNGAVVTTTITTTTRGLPNGKVATTPSSNNGPSHIFQVTPSYPHGPEQGNGLSDPVQLMRLLSENAQKQQKKPPNQSAIEAPHPPPPAPPQLNLPTPPPMRRDDSGNAAAAAARAWMSIGAAGLKKVTENHISADSIYNAAREFHPQNTRISSSSENKNSFPLQAYNVPPQPTQPTHLQNNRPMIFSHFGSPADLSKFQVQSTSSPSWRGLSPHTQMRQKQDMCPPDLNIGFQSPGSPPRQSNGVIVDSQQPDLALQL 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9522833 9528035 - Conep14aG0117600.1 Cone14ag1152 453001

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1152 880 ProSitePatterns Bromodomain signature. 206 262 IPR018359 -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 130 155 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 818 841 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 509 527 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 501 578 - -
Cone14ag1152 880 ProSiteProfiles Bromodomain profile. 200 270 IPR001487 GO:0005515(InterPro)
Cone14ag1152 880 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 879 IPR051831 -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 46 65 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 688 731 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 1 15 - -
Cone14ag1152 880 Gene3D - 187 309 IPR036427 GO:0005515(InterPro)
Cone14ag1152 880 MobiDBLite consensus disorder prediction 636 676 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 112 129 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 856 880 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 82 105 - -
Cone14ag1152 880 CDD Bromodomain 188 284 - -
Cone14ag1152 880 PRINTS Bromodomain signature 217 233 IPR001487 GO:0005515(InterPro)
Cone14ag1152 880 PRINTS Bromodomain signature 251 270 IPR001487 GO:0005515(InterPro)
Cone14ag1152 880 PRINTS Bromodomain signature 233 251 IPR001487 GO:0005515(InterPro)
Cone14ag1152 880 SMART bromo_6 181 289 IPR001487 GO:0005515(InterPro)
Cone14ag1152 880 SUPERFAMILY Bromodomain 169 290 IPR036427 GO:0005515(InterPro)
Cone14ag1152 880 MobiDBLite consensus disorder prediction 75 186 - -
Cone14ag1152 880 Pfam Bromodomain 195 273 IPR001487 GO:0005515(InterPro)
Cone14ag1152 880 MobiDBLite consensus disorder prediction 700 719 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 636 659 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 1 28 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 539 574 - -
Cone14ag1152 880 MobiDBLite consensus disorder prediction 818 880 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1152 K22184 - - csv:101204699 795.423
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1152 Cone-Chr14:9522833 Cone3ag1249 Cone-Chr3:31304612 1.09E-75 dispersed
Cone14ag1152 Cone-Chr14:9522833 Cone15ag1169 Cone-Chr15:9444959 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g527 . . . . Bpe09g00169 . . . . . Cma01g01124 . Car01g00998 Car09g00874 Sed04g3216 Cpe06g00774 Cpe02g00777 Bhi09g01656 Tan01g4563 Cmetu01g2650 . Hepe01g1265 Mch11g1197 . . . . . . . . . . Cone14ag1152 Cone15ag1169 Lsi02g01898 Csa07g01101 . . Blo07g00901 . Bda05g00716 Bda12g00914 . Bpe03g00789 . . . Cmo01g01175 Cmo09g00956 . . . . . . . . . . . . . Cla09g01015 Cam09g1072 Cec09g1072 Cco09g1090 . . Cre09g1036 . . . Cme01g01024
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005656 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 39