Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1185 ATGGCATCTTATGCAGATTCATGGACAAAGGAGTACAATGAAGCTCAAAAACTTGCTGATGATATCAATGGCATGATTACTGAGCGGCGTTCCCTTTCTATCTCTGGACCAGAAGCCCATCGCAATGCGTCTGCTATAAGGCGGAAGATTACAATATTGGGGACTAGGATTGATACCTTACAGTCCCTTCTATCAAAGCTTCCTGGAAAACAGCCCATGACAGATAAAGAGTTGAATCGGCGCAAAGAAATGCTTAAAAATTTGAGAACAAAAGTTACAGAGATGTCAACAACATTGAACATTTCCAACTCTGCTAGTCGTGAAAGCTTGCTTGGTCCAGACACAAAGGCAGAAGATGCCATGAACAGGACACTAGGACTGGATAACCAAGGCCTTGTTGGTCTCCAACAACAAATCATTAAAGAGCAAGATGAAGGCCTTGAAAAGCTGCATGAGACTGTAATAAGTACAAAACATATTGCATTGGCAGTCAATGAAGAACTTGACCTTCACACGAGACTAATTGATCAGTTGGACCAACATGTGGATGTTACAGATTCCCAGTTAATGGTGAAATTCTTAATATCACCTTTGTCTTAA 600 41.0 MASYADSWTKEYNEAQKLADDINGMITERRSLSISGPEAHRNASAIRRKITILGTRIDTLQSLLSKLPGKQPMTDKELNRRKEMLKNLRTKVTEMSTTLNISNSASRESLLGPDTKAEDAMNRTLGLDNQGLVGLQQQIIKEQDEGLEKLHETVISTKHIALAVNEELDLHTRLIDQLDQHVDVTDSQLMVKFLISPLS 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9681715 9684267 - Conep14aG0120900.1 Cone14ag1185 453034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1185 199 SUPERFAMILY SNARE fusion complex 128 189 - -
Cone14ag1185 199 CDD SNARE_Qc 140 189 - -
Cone14ag1185 199 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 189 IPR000727 -
Cone14ag1185 199 Gene3D - 139 192 - -
Cone14ag1185 199 PANTHER SYNTAXIN 11 188 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Cone14ag1185 199 FunFam syntaxin-51 isoform X2 139 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1185 Cone-Chr14:9681715 Cone15ag1202 Cone-Chr15:9586818 2.85E-111 wgd
Cone14ag1185 Cone-Chr14:9681715 Cone6ag0041 Cone-Chr6:250828 2.49E-88 wgd
Cone14ag1185 Cone-Chr14:9681715 Cone9ag0047 Cone-Chr9:243349 1.35E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1185 K08503 - cit:102608030 292.737