Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1205 ATGCCGACTGTAGTTCCCGATCCAACGGAAACGGACGAGGAGCTCTTTATCGAAATCGATCCAACCAGCCGATATGGCCGCTACAACGAGTTACTAGGTTCCGGTGCAGTGAAAAAAGTTTACCGAGCCTTTGATCAAGAAGAAGGGAAAGAGGTTGCATGGAACCAAAACGTGTGGAGGGATAAGGAACACAACACTTTGAATTTCATTACAGAAGTTTGTGCAAGTGGGAATTTGAGAGAGTATAGGAGGAAACATAAGAATGTTTCAATCAAGGCATTTAAGAAGTGGTCTAAGCAAATACTCAAAGGGTTGGATTACCTGCATAACTATGAGCCTTGTGTTATTCATAGAGACCTCAATTGCAGCAATTTGTTTGTTAATGGCAACATTGGCCAGGTGAAGATTGGTGACTTGGGGTTGGCAGCAATAGTAGGGAAGAGTCATTCAGCACATTCGGTATTAGGGACACCGGAATATATGGCACCGGAGCTATACGAAGAAGATTATACAGAAATGGTTGATATCTATTCATTTGGAATGTGCTTACTTGAATTAGTCACACTTGAAATTCCATATAGTGAATGTGATAATGTTGTTAAGATCTATAAAAAAGTCTCTTCTGGAGTGAGACCTCAAGCCCTTGAAAAGGTATCTAATTCTGAAGTTAAGAGATTTATCGAGAAGTGCCTTGCTCAGCCTAGGGCCCGCCCTTCCACCATGGAACTTCTTAGGGATCCTTTTTTTGATGAAATCGATGATGACGAAAGTGATGACTCTATATCTTCTTGA 792 41.29 MPTVVPDPTETDEELFIEIDPTSRYGRYNELLGSGAVKKVYRAFDQEEGKEVAWNQNVWRDKEHNTLNFITEVCASGNLREYRRKHKNVSIKAFKKWSKQILKGLDYLHNYEPCVIHRDLNCSNLFVNGNIGQVKIGDLGLAAIVGKSHSAHSVLGTPEYMAPELYEEDYTEMVDIYSFGMCLLELVTLEIPYSECDNVVKIYKKVSSGVRPQALEKVSNSEVKRFIEKCLAQPRARPSTMELLRDPFFDEIDDDESDDSISS 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9809900 9810889 - Conep14aG0123700.1 Cone14ag1205 453054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1205 263 SUPERFAMILY Protein kinase-like (PK-like) 19 250 IPR011009 -
Cone14ag1205 263 Gene3D Transferase(Phosphotransferase) domain 1 27 262 - -
Cone14ag1205 263 FunFam probable serine/threonine-protein kinase WNK9 74 255 - -
Cone14ag1205 263 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 56 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone14ag1205 263 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1205 263 Pfam Protein kinase domain 63 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1205 Cone-Chr14:9809900 Cone3ag1295 Cone-Chr3:31818478 6.52E-139 dispersed
Cone14ag1205 Cone-Chr14:9809900 Cone15ag1222 Cone-Chr15:9719898 7.49E-162 wgd
Cone14ag1205 Cone-Chr14:9809900 Cone6ag0029 Cone-Chr6:182398 4.22E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82115 PF08423 Rad51 1.40E-44 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1205 K08867 - rcu:8277577 421.394