Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1207 ATGGTAGGACCTGAATATCCGGACATGCTTGAACTGAATTCCAACATAACAGAAGCCGAAAAGTGGTCCCAAATGAAGGAACTGCTATGTGCTTGCGCAAAGGCTGTAGAAGTAAAGGACATGATGATGTCGGAGTGGTTGATCTCGGAGTTACGATCAACGGTCTCGGTTTCCGGAAACCCAATCCAACGGCTAGGCGCTTACATGCTAGAAGGGTTAATAGCAAGGCTTGCCTCTTCAGGTAACTCTCTCTTCAAGGCTCTAAGATGCAAAGAGCCGACTAGTTCCGAACTTCTCTCATACATGTTTAAATTCTATGAAATCTGCCCATACTTCAAATTCGGTTACATGTCAGCAAACGGGGCAATAGCCGAATCGGTCAAAGACGAAAAGAAAATCCACATTATCGATTTTCAAATCGCTCAAGGAGGGCAATGGGTTTCACTGATCCAAGCCCTTGCTTCTCGTCCCGGTGGGCCCCCAGAGATCCGAATAACCGGAATAGATGATCCGAGTTCGGCTTATGCACGAGGAGGCGGGCTTGAAATTGTTAAAAAACGTATATCGAACGTTGCCAAGTCATGTTTAGTACCCTTTGAATTCCATGCTATTGAAATCCCGGGTTCCGAAATTCAACTCGAAGACCTAGAAGTCCTACCCGATGAGGGAGTCGTCGTAAATTTCGCCTTCATGTTACACCACATTCCGGATGAAAGCGTTGAAAATAGTCAAAACCATCGCGATAGGTTATTGAGGCTAGTCAAGGGCTTATCTCCAAAAATTGTGACTATAGTCGAACAAGAGTGTAACACCAATACGTCATTTCTTCCTCGTTTTATCGAAACATTGAGATATTACACATCGATTTTTGAGTCTATAGACGTGACATTGTCAAGGGAGGACAAGGAGAGGATCAATGTAGAACAACATTGTCTGGCTCGAGAGATTGTGAACATTATAGCATGCGAGGGAAAGGAGAGAGTTGAACGGCACGAAGTTCTAGGGAAATGGAGGGCTAGGGTTGTTAAGGCCGGGTTTAGGCCATGTCCGTTAAGCTCATTTGTTAATTCTACGATCGAGGGTTTATTGAAGAATTATAGTGAGAAGTATACTCTTGAGGAAAGAGATGGTGCTTTGTATCTTGGATGGGAAAATCAGCCTCTAGTCGCTTCTTGTGCTTGGATTTGA 1188 44.28 MVGPEYPDMLELNSNITEAEKWSQMKELLCACAKAVEVKDMMMSEWLISELRSTVSVSGNPIQRLGAYMLEGLIARLASSGNSLFKALRCKEPTSSELLSYMFKFYEICPYFKFGYMSANGAIAESVKDEKKIHIIDFQIAQGGQWVSLIQALASRPGGPPEIRITGIDDPSSAYARGGGLEIVKKRISNVAKSCLVPFEFHAIEIPGSEIQLEDLEVLPDEGVVVNFAFMLHHIPDESVENSQNHRDRLLRLVKGLSPKIVTIVEQECNTNTSFLPRFIETLRYYTSIFESIDVTLSREDKERINVEQHCLAREIVNIIACEGKERVERHEVLGKWRARVVKAGFRPCPLSSFVNSTIEGLLKNYSEKYTLEERDGALYLGWENQPLVASCAWI 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9818414 9819601 - Conep14aG0123900.1 Cone14ag1207 453056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1207 395 ProSiteProfiles GRAS family profile. 16 395 IPR005202 -
Cone14ag1207 395 Pfam GRAS domain family 25 394 IPR005202 -
Cone14ag1207 395 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 394 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1246 Cone-Chr10:9461020 Cone14ag1207 Cone-Chr14:9818414 1.79E-188 dispersed
Cone14ag1207 Cone-Chr14:9818414 Cone3ag1294 Cone-Chr3:31806914 7.18E-184 dispersed
Cone1ag0045 Cone-Chr1:251397 Cone14ag1207 Cone-Chr14:9818414 2.16E-147 wgd
Cone14ag1207 Cone-Chr14:9818414 Cone15ag1224 Cone-Chr15:9727275 1.20E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44801 PF07714 PK_Tyr_Ser-Thr 3.80E-33 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1207 K27748 - rcu:8277582 560.066