Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1233 ATGAATACCCATTACTTCCTGCCTGATTTAATGTGCAATTCTAGCTCTTCCGTCTCTCTTCCATCAAACCCTTCTTCACCCAGAGAAGAAGAAGGTTCTGGAACAACTACTAGACTCACAAATCGACCTTCTTCTAGAGTTCTCCCTTCTTCTTTCTGGGTCCGTTTGGCAATTAGAATATCTAGAGCAAGATGGTTTACTTTCTTAAGAAGGGTATTCCACTACCAAAATGGGCCTAGATCTGATCTCGAGTCTAATCCTTTCAATTCCGGCACTTGGATGATGCTTGAGCTTATTGCTTTGGTTATTCAGATAAGCATTTCGTTGTTCACACTTGCCATTTCAAAGAGGGAAAAACCTGTTTGGCCTATGAGAGTTTGGATTGTTGGGTATGATATAGGATGTGCTCTTAGTCTCTTACTACTCTATGGTCGGTATAAGTATCTTCCTTCGACCCAAATTGATGGTTTTAACATTGAGCAAATTGAGCAGCAAAGGAGCAATGACGAATCAAGGACTTCTCATTTGATGAACAAATGCAGAACATCACTCGAGCTATTCTTCGCGATATGGTTCGTAATGGGCAATGTCTGGGTCTTTGATTCTCGTTTCGATTCATTTCCACGAGCTCCAAAGCTTCATGTTCTAAGCATCTGCTTGCTAGCTTGGAATGCAATCTGCTACTCTTTCCCTTTCCTTCTCTTCCTCCTCCTATGTTGCTGTGTGCCGTTGATTAGCAGTGTCCTAGGATACAACATGAACATGGGGTCCACCGATCGAGGAGCATCTGATGATCAAATTACGAATCTGCCCAGTTGGAGATATAAAGCTGTTGATGTGAAGGTAGAGTGCGGAAGTGATCGTTCTGGCTGTGGGGCCAATTCAAACCTCTCAAGTGAAGATGCAGAATGTTGTATATGCCTTGCAAAGTATAGAGAGAAAGAAGAAGTGAGAGAGTTGCCATGTTCACATGTGTTTCACCTCAAGTGTGTGGATAAATGGCTCAAGATCATGTCTTGTTGTCCTCTTTGTAAGCAACAACTAGACAGATAA 1053 42.26 MNTHYFLPDLMCNSSSSVSLPSNPSSPREEEGSGTTTRLTNRPSSRVLPSSFWVRLAIRISRARWFTFLRRVFHYQNGPRSDLESNPFNSGTWMMLELIALVIQISISLFTLAISKREKPVWPMRVWIVGYDIGCALSLLLLYGRYKYLPSTQIDGFNIEQIEQQRSNDESRTSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFDSFPRAPKLHVLSICLLAWNAICYSFPFLLFLLLCCCVPLISSVLGYNMNMGSTDRGASDDQITNLPSWRYKAVDVKVECGSDRSGCGANSNLSSEDAECCICLAKYREKEEVRELPCSHVFHLKCVDKWLKIMSCCPLCKQQLDR 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10004483 10006670 - Conep14aG0126500.1 Cone14ag1233 453082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1233 350 Pfam Ring finger domain 303 345 IPR001841 -
Cone14ag1233 350 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 22 348 - -
Cone14ag1233 350 SUPERFAMILY RING/U-box 298 348 - -
Cone14ag1233 350 SMART ring_2 304 344 IPR001841 -
Cone14ag1233 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 349 IPR013083 -
Cone14ag1233 350 ProSiteProfiles Zinc finger RING-type profile. 304 345 IPR001841 -
Cone14ag1233 350 MobiDBLite consensus disorder prediction 15 43 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0796 Cone-Chr13:7382237 Cone14ag1233 Cone-Chr14:10004483 1.16E-11 dispersed
Cone14ag1233 Cone-Chr14:10004483 Cone4ag1828 Cone-Chr4:13199765 3.30E-61 dispersed
Cone14ag1233 Cone-Chr14:10004483 Cone16ag0681 Cone-Chr16:8140932 3.62E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1233 - - - 0.0