Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1244 ATGCCTTCATCTCTAAGAAACTCCTTCTCTTCTTCCAATATCCTCCTCCTCATCTCTTTCACCTTCATCCTTTCAATAAACTCCCTCCTCTACCTTTCTTCTTGTTCCTCCATTCTTGAACAGTCTCAAGCTCTTCTTACATGGAAAAACACTATAAACAGCTCAACCAATGCATTACAATCATGGAACCCTTCCGGCTCGAGCCCCTGCAATTGGCTCGGAATTGTCTGTAACTCAAACGGAGATGTCATAGAAATAACTTTGAAGTCAATAGACTTACAAGGCTCCTTGCCTTCAAATTTCCAACCTCTTGTCTTCTTGAAAACACTTACCATATCTTCCACCAATCTTTCCGGACCGATACCGAAACAAATCGGACAGTATTTCGAACTGAGTTTCCTCGATCTTAGTGACAATTCTCTCTCCGGCCAAATTCCCGATGAGCTATGCCAGCTAAGCAAGCTTGAAGCTTTGTATCTCAACACAAACTACTTTGAAGGAGAGATTCCTTCACCACTAGGGAATCTTTCGAATCTTCAGCATCTAGCATTGTATGATAATAAACTTGGAGGCGAGATTCCAAAGAGTATTGGATCACTGAGAAGATTGCAGACTTTAAGAGCAGGTGGGAATAAGGACTTGAAAGGAGAGCTTCCATGGGAGATTGGAAACTGCTCGGATTTACTCATGCTAGGCCTGGCCGAAACGAGTATTTCCGGAGCTCTTCCTTCTTCAATCGGAATGCTGAAGAGAATCCAAACCATAGCCATTTACACTTCTCTATTAACCGGTCCAATCCCGGAAGAAATCGGAAACTGCAGTGATTTGCAGAATCTCTACTTGTTCCAGAATTCTGTTTCGGGTCCGATCCCGAGGACAATCGGAGAGCTTAGCAAGCTCGAGAGATTGCTTTTATGGCAGAACAGCTTGGTGGGTCTGATCCCTGATGAGCTCGGGAGGTGTAAAGAGCTTACTGTTATTGATTTGTCGGAAAATCTTCTGACAGGGAGCATACCGAAAAGTCTCGATCAGTTGTCGAATCTTGAGGAGCTTCAACTTAGTGTTAATCAGTTATCAGGTACCATTCCTTCTGAAATCACTAACTGTACTACTCTGATTCATCTTGAAGTAGACAACAATAATATTTCGGGAGAAATTCCGGTCCGAATCGGAAGCTTGAAGAGGTTGACTCTCTTATTCGCCTGGCAGAACAATCTAACTGGAAATATTCCGGAAAGTATCTCTAACTGTCAGGATCTTCAAGCTATTGATCTGTCTTATAACAATCTAATTGGTGAGATTCCGAAAGGGATTTTCGGGTTGAAGAATCTAACCAAGATTCTTCTAATCTCAAACGGTTTATCCGGGTTCATACCTCCCGAGGTCGGAAACTGTACAAATCTTTACCGGTTTCGAGTCAACAATAATCGGCTTGGAGGTACTATTCCATCCGAAATTGGAAACTTGAAAAGCTTGAATTTTTTTGACATGAGCAATAACCGTTTTGTGGGACCCATTCCTTTATCTATTTCCAGATGTGAAGAACTCGAGTTTCTTGACCTCCATTCAAATGGGATCTCCGGCTCATTGCCCGATTCACTCCCGAAAAGCCTCCGATTTCTCGACATTTCCGATAATAGACTTTCCAGTTCACTTGTCCCTAGCATCGGTTCTTTAACTGAATTAACTAAACTCAACTTAGGGAATAACCAACTTTCCGGTTTGATCCCTTCTGAGGTTCTTTCTTGTAGCAAGCTCCAACTTTTAGACCTCGGAGGCAATGGCTTTTCCGGTCAAATTCCGAATGAATTGTGTCAACTTACGTCTCTAGAAATCTCGCTCAATCTAAGCTGTAACCAACTTTCCGGCCCAATCCCGCCTCGATTCTCCGATCTAAGCAAGTTGGGAACTCTTGACCTCTCCCACAACAAACTTTCGGGGAACTTGACCATTATCGCAAGCCTTCAAAACCTCGTAAATCTGAACATCTCAGACAATGAATTCTCCGGTGAATTACCCAACACCCCATTCTTCCAGAAGCTTCCTATGAGCGACCTTACTTCAAACAAAGGCCTGTACATATCAGGGGCGGTTGCTACTCCGGCCGATAAGATGGGCTCTGCTGGCCGTAATAGATCCACTATGAGACTAGCAATGCCGATCCTAGTAAGCATTAGTGCAGTACTAATCCTCCTTGCCGTTTACATGCTAGTCCGGATTCGTATATCAAACAAGCTTCTAGCCAATGATGACAGTTGGGAAGTTACTTTGTATCAAAAGCTCGGTCTTTCGATCAATGACATTCTTCAAAACTTAACATCATCAAATGTGGTCGGAACCGGAAGCTCTGGGGTTGTATACAGAGTAACAATCCCGAACGGTCAGACACTTGCGGTAAAAAAAATGTGGTCAACGGAAGATTCCGGAGCATTTGGTTCGGAAATCCAGACACTAAGTTCAATCCGACACAAGAATGTTATAAGGCTTTTAGGCTGGGGATCGAACCGGCATTTGAAACTCTTGTTTTACGATTATCTTCCTAATGGAAGTTTGAGTTCCTTACTACATGGGGCGAGTAAGTCCGGAGCTGAATGGGAGGCTCGGTATGATGTTATCTTAGGCATTGGTCATGCACTTGCTTACCTACATCATGACTGCGTTCCTCCTATCCTACATGGTGATGTCAAAGCCATGAACGTCTTGCTTGGTCCTGGATTTCAACCTTATCTTGCTGATTTCGGGTTGGCTCGGATTGTTACCAAAAATGATGATAGTGATTCTGCTACATCATGTCAAACGAAACCTCAACTTGCTGGTTCTTATGGATACATGGCTCCAGAGCATGGATCGATGCAGCGTATAACTGAAAAGAGTGACGTGTACAGTTTCGGAGTAGTCCTATTAGAAGTTCTAACCGGAAAGCATCCATTGGACCCCACTTTGCCTGGGGGAGCAAACTTGGTCCAATGGGTCCGAGACCACTTAGGATGGAAGAGAAATCCGGTCGAAATTCTCGACCCGAAGCTTCAAAGCCGGGCGGACCCCACAATGCATGAGATGCTACAGACATTGGCTGTTTCGTTTCTTTGTGTTAGTAACCGAGCCGATGATCGGCCGGTGATGAAAGATGTGGTCGCTATGCTAAAGGAAATCCGACATGTCGAGCTCTCGAGGTCCGACAATGACATGTTGAAAGGAGGTGGAGTGTCTGCCGTCGAGCCATCGGCAGTACCTCCAGCTAGGAAAGTAGTTTTTTCATCACAAGGATCCTCTAATTGTTCATTTGCTTTCTCTGATGATTCTGTTTAA 3309 44.09 MPSSLRNSFSSSNILLLISFTFILSINSLLYLSSCSSILEQSQALLTWKNTINSSTNALQSWNPSGSSPCNWLGIVCNSNGDVIEITLKSIDLQGSLPSNFQPLVFLKTLTISSTNLSGPIPKQIGQYFELSFLDLSDNSLSGQIPDELCQLSKLEALYLNTNYFEGEIPSPLGNLSNLQHLALYDNKLGGEIPKSIGSLRRLQTLRAGGNKDLKGELPWEIGNCSDLLMLGLAETSISGALPSSIGMLKRIQTIAIYTSLLTGPIPEEIGNCSDLQNLYLFQNSVSGPIPRTIGELSKLERLLLWQNSLVGLIPDELGRCKELTVIDLSENLLTGSIPKSLDQLSNLEELQLSVNQLSGTIPSEITNCTTLIHLEVDNNNISGEIPVRIGSLKRLTLLFAWQNNLTGNIPESISNCQDLQAIDLSYNNLIGEIPKGIFGLKNLTKILLISNGLSGFIPPEVGNCTNLYRFRVNNNRLGGTIPSEIGNLKSLNFFDMSNNRFVGPIPLSISRCEELEFLDLHSNGISGSLPDSLPKSLRFLDISDNRLSSSLVPSIGSLTELTKLNLGNNQLSGLIPSEVLSCSKLQLLDLGGNGFSGQIPNELCQLTSLEISLNLSCNQLSGPIPPRFSDLSKLGTLDLSHNKLSGNLTIIASLQNLVNLNISDNEFSGELPNTPFFQKLPMSDLTSNKGLYISGAVATPADKMGSAGRNRSTMRLAMPILVSISAVLILLAVYMLVRIRISNKLLANDDSWEVTLYQKLGLSINDILQNLTSSNVVGTGSSGVVYRVTIPNGQTLAVKKMWSTEDSGAFGSEIQTLSSIRHKNVIRLLGWGSNRHLKLLFYDYLPNGSLSSLLHGASKSGAEWEARYDVILGIGHALAYLHHDCVPPILHGDVKAMNVLLGPGFQPYLADFGLARIVTKNDDSDSATSCQTKPQLAGSYGYMAPEHGSMQRITEKSDVYSFGVVLLEVLTGKHPLDPTLPGGANLVQWVRDHLGWKRNPVEILDPKLQSRADPTMHEMLQTLAVSFLCVSNRADDRPVMKDVVAMLKEIRHVELSRSDNDMLKGGGVSAVEPSAVPPARKVVFSSQGSSNCSFAFSDDSV 1102
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10050867 10054528 + Conep14aG0127600.1 Cone14ag1244 453093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1244 1102 FunFam Predicted protein 196 292 - -
Cone14ag1244 1102 SUPERFAMILY RNI-like 267 597 - -
Cone14ag1244 1102 Gene3D Transferase(Phosphotransferase) domain 1 846 1066 - -
Cone14ag1244 1102 SMART LRR_typ_2 607 631 IPR003591 -
Cone14ag1244 1102 SMART LRR_typ_2 345 369 IPR003591 -
Cone14ag1244 1102 SMART LRR_typ_2 559 583 IPR003591 -
Cone14ag1244 1102 SMART LRR_typ_2 297 321 IPR003591 -
Cone14ag1244 1102 SMART LRR_typ_2 441 465 IPR003591 -
Cone14ag1244 1102 SMART LRR_typ_2 176 200 IPR003591 -
Cone14ag1244 1102 SUPERFAMILY Protein kinase-like (PK-like) 763 1048 IPR011009 -
Cone14ag1244 1102 SUPERFAMILY L domain-like 36 315 - -
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 40 150 IPR032675 -
Cone14ag1244 1102 Pfam Leucine rich repeat 299 358 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 ProSiteProfiles Protein kinase domain profile. 772 1056 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1244 1102 ProSitePatterns Protein kinases ATP-binding region signature. 778 801 IPR017441 GO:0005524(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 178 200 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 467 489 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 154 176 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 516 535 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 420 441 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 562 581 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 131 152 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 585 607 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 613 632 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 537 559 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 Pfam Leucine Rich Repeat 491 513 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 231 337 IPR032675 -
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 613 698 IPR032675 -
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 338 434 IPR032675 -
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 535 612 IPR032675 -
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 435 534 IPR032675 -
Cone14ag1244 1102 FunFam Putative LRR receptor-like serine/threonine-protein kinase 757 845 - -
Cone14ag1244 1102 PRINTS Leucine-rich repeat signature 632 645 - -
Cone14ag1244 1102 PRINTS Leucine-rich repeat signature 131 144 - -
Cone14ag1244 1102 ProSiteProfiles Leucine-rich repeat profile. 561 582 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 FunFam Leucine-rich receptor-like protein kinase family protein 340 612 - -
Cone14ag1244 1102 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 565 1045 IPR052592 -
Cone14ag1244 1102 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 846 1065 - -
Cone14ag1244 1102 FunFam Leucine-rich receptor-like protein kinase family protein 38 195 - -
Cone14ag1244 1102 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Cone14ag1244 1102 Pfam Protein kinase domain 775 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1244 1102 ProSiteProfiles Leucine-rich repeat profile. 634 656 IPR001611 GO:0005515(InterPro)
Cone14ag1244 1102 SMART serkin_6 772 1029 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1244 1102 Gene3D Ribonuclease Inhibitor 151 230 IPR032675 -
Cone14ag1244 1102 Gene3D Phosphorylase Kinase; domain 1 741 845 - -
Cone14ag1244 1102 FunFam Putative LRR receptor-like serine/threonine-protein kinase 613 698 - -
Cone14ag1244 1102 SUPERFAMILY L domain-like 576 673 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1244 Cone-Chr14:10050867 Cone16ag0085 Cone-Chr16:455027 1.08E-130 dispersed
Cone15ag1269 Cone-Chr15:9993704 Cone14ag1244 Cone-Chr14:10050867 3.05E-95 transposed
Cone14ag1244 Cone-Chr14:10050867 Cone15ag1268 Cone-Chr15:9990878 1.94E-205 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82117 PF00753 Lactamase_B 7.90E-19 CL0381 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1244 - - - 0.0