Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1258 ATGGACTCCAAATCTGGTACCAAAACTTCTGAAGAAGCCCAAAAGAAAGTGATTAGTAATAAAAAACCAGAACAAAATCCCCCTTTGCAAATCACAAAGGAAAGCAAAACCGAGCCAGTTATCCCAACAAAAGTACCTGAAAGAGCACAAGAAGTTTTATCAAAGGAGGAGGTTTCTATGGAAAATTCGGAGAAGAAAGAAGAGTCCTCTAATTCCTTAGCTGATAAGTTGGAAACAAGTTACTCCTTGGCTCATCCGAAACAAGAGCAAAAGAAAGCCTCATCTAAAGTGGGGATCGGTAAAACCCACAGTGACCGGCCTGAATTTCTGGATAGTGGGAAAAGTAGTATGTGTAGAGGTAGTACAAGTAGTGATATGAGTGATGAGAGTTCATGTAGTAGCTTAAGCAGCTCGGCTAATAAACCTCACAAAGCAAATGATGTAAGATGGGAAGCGATCCAAGCAGTCCGTTTGAAAGATGGTGTTTTGGGCGTTAGCCATTTTAGACTTTTGAAGAAGCTTGGAAGTGGAGATATAGGATGTGTTTATCTATCTGAATTGAGAGGGACAAAGTGTTGTTTTGCTATGAAGGTTATGGATAAGGCATCTTTAGTGAGCCGTAAGAAGCTTCTTCGAGCTCAAACCGAAAGAGAGATTCTTCAATCACTTGACCATCCTTTTTTGCCGACTCTTTATACACATTTTGAGACGGATAAGTTCTCTTGTTTGGTTATGGAGTTTTGCCCTGGAGGTGACTTGCATACTCTTCGCCAGAGGCAGCCTGGAAAGTATTTTTCCGAACAAGCAGTCAAATTCTATGTGGCAGAAATTCTCCTTGCTCTAGAATATCTCCATATGCTTGGAATCGTGTACCGTGATCTCAAACCGGAAAATGTCCTTGTTAGAGAAGATGGTCATATAATGCTTTCCGACTTTGACCTTTCACTCCGCTGTGTTTCTAGCCCGACCCTTGTCAAGTCCTCCATCCCAGAATCTGACCCTCTCCGGAGAAACCTGGTCTATTGCATCCAACCAGCTTGCATTGAACCCTCTTGTATCCAACCATCTTGTGTCATGCCCACCACTTGCTTTTCACCTCGCCTCCTCTTCTCAAAATCAAAAAAAGAGAGAAAACCCAAAAACGAAATGGGCAACCAGGTGAGCCCACTGCCCGAGCTCATTGCAGAGCCCACTAATGCCCGGTCCATGTCATTTGTTGGGACCCACGAGTATTTAGCACCCGAGATTATCAAAGGTGAAGGTCATGGAAGTGCTGTAGATTGGTGGACTTTCGGGATTTTTCTTTACGAGCTTTTGTTCGGGAAGACTCCATTTAAAGGGTCCGGAAATCGTCAAACTTTGTTCAATGTGGTGGGCCAGCCTCTACGGTTTCCAGAATCTCCAATGGTTAGTTTTTCGGCCCGGGATTTGATTAGAGGCTTGCTTGTTAAAGAGCCTCAGAATCGGTTGGCTTATAAGCGTGGAGCGACAGAGATTAAACAGCATCCGTTTTTTGAAGGTGTGAATTGGGCCTTGATCCGTTGTGCTAGCCCGCCTGAGATTCCGAGGCCCGTCATTGAGATTCCGAGAATTCCGGGACCCTCTTCTACTACAGCAAGTGATAAAGTGACTGCTGCTTCAGCTGTTTTCTCTGATGAAAGCAATTATTTGGAATTCGATTTCTTCTAG 1689 43.93 MDSKSGTKTSEEAQKKVISNKKPEQNPPLQITKESKTEPVIPTKVPERAQEVLSKEEVSMENSEKKEESSNSLADKLETSYSLAHPKQEQKKASSKVGIGKTHSDRPEFLDSGKSSMCRGSTSSDMSDESSCSSLSSSANKPHKANDVRWEAIQAVRLKDGVLGVSHFRLLKKLGSGDIGCVYLSELRGTKCCFAMKVMDKASLVSRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEILLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCVSSPTLVKSSIPESDPLRRNLVYCIQPACIEPSCIQPSCVMPTTCFSPRLLFSKSKKERKPKNEMGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRQTLFNVVGQPLRFPESPMVSFSARDLIRGLLVKEPQNRLAYKRGATEIKQHPFFEGVNWALIRCASPPEIPRPVIEIPRIPGPSSTTASDKVTAASAVFSDESNYLEFDFF 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10108389 10112018 - Conep14aG0129000.1 Cone14ag1258 453107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1258 562 MobiDBLite consensus disorder prediction 1 19 - -
Cone14ag1258 562 Gene3D Phosphorylase Kinase; domain 1 166 251 - -
Cone14ag1258 562 PANTHER FLIPPASE KINASE 1-RELATED 43 537 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone14ag1258 562 FunFam serine/threonine-protein kinase D6PK-like 252 319 - -
Cone14ag1258 562 Pfam Protein kinase domain 169 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1258 562 Pfam Protein kinase domain 402 505 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1258 562 CDD STKc_phototropin_like 166 524 - -
Cone14ag1258 562 ProSiteProfiles Protein kinase domain profile. 168 505 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1258 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1258 562 SUPERFAMILY Protein kinase-like (PK-like) 144 537 IPR011009 -
Cone14ag1258 562 FunFam Serine/threonine-protein kinase D6PK-like 166 251 - -
Cone14ag1258 562 SMART serkin_6 168 505 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1258 562 Gene3D Transferase(Phosphotransferase) domain 1 399 522 - -
Cone14ag1258 562 FunFam Serine/threonine-protein kinase AGC1-7 398 523 - -
Cone14ag1258 562 MobiDBLite consensus disorder prediction 115 143 - -
Cone14ag1258 562 MobiDBLite consensus disorder prediction 20 37 - -
Cone14ag1258 562 MobiDBLite consensus disorder prediction 89 112 - -
Cone14ag1258 562 MobiDBLite consensus disorder prediction 1 143 - -
Cone14ag1258 562 MobiDBLite consensus disorder prediction 49 73 - -
Cone14ag1258 562 Gene3D Transferase(Phosphotransferase) domain 1 252 322 - -
Cone14ag1258 562 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1258 Cone-Chr14:10108389 Cone5ag1793 Cone-Chr5:12725115 1.73E-253 dispersed
Cone12ag1291 Cone-Chr12:9841439 Cone14ag1258 Cone-Chr14:10108389 1.06E-08 wgd
Cone14ag1258 Cone-Chr14:10108389 Cone15ag1280 Cone-Chr15:10048589 0 wgd
Cone14ag1258 Cone-Chr14:10108389 Cone8ag1349 Cone-Chr8:10827919 4.68E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82118 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1258 K08286 - cit:102620900 813.142