Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1274 ATGGCCTTGCCAGAGGAAGCTTCAAAATCTAGCTTAACTGGGCTGTCCATCAAGACAACCCCACATTTGGCTTCTTCAAACCTAAACAATCATCCGATAGAACCATCTCCCTACAACTCTCCCTCCCTTGTCTCCCCCCCTTCTTCTGCATTTGTTTCAGCCTTACAGTCTCCTTACATTTCTCCCAGGGCCACCGGCTCACAACCTCCAGCCAAGCCCACTCCCTTGACCCAGTGCGAATGTTCGGACGACATTCCAAGCAGTTCCTATACTCCTCCTTCTGACCACTACGAATTTTCCGACGGCCCGCCGCTCAAGTTTGTTACATGCAGCATGGGGGATGCACCTGCCTCTGCCCCTCCCCGCATCTCATTTTCTTTCCCAGTGCCCCGGATTTCATTCGGCAAAGGAGGTGGTGGAGGAGGCCCCATCTCTCCTGCTTCCACCAATGCCAAACTCAGGAGCTGTGATGTTTATATTGGCTTCCATGGCCACAATCCCAATCTGGTGCGCTTCTCAAAGTGGCTCAAATCAGAACTTGAGCTTCAGGGGATTGCTTGTTTTGTTGCTGACAGAGCCAAGTACTCTGATAATCAGAGCCACGAGATTGCAGACCGAGTTATCTGCTCTGTTGCATTTGCAGTTGTGGTTGTCACCAGCTCTTCATTCGTCAACCATTTCAGTATGGAGGAGATCAGATTCTTTTCCCAGAAGAAGAATCTCATCCCCATCTTCTTCGACTCAGATCCTGGCGAGATTATGAGCCTTCTCAGCTACAATTCAGTGGATAAAGAATGCAAGGAGGCAGTCAACGGAGTAATCAAGTGCCATGAATTCAAATTGGAAGCCAATGAGGGCAACTGGAGGAATTGCCTCTCCAGAACTGCCGGCATTTTGTGTGCTAAGCTAGGCAGGAAGAGTGCGGTTGGGGCTGATCTTGAAAGACTTGAGGACCTCAGTTTCCCCAGGAACAATTATTTTGTGGGAAGGGAGAAGGAGCTGGTGGAAATAGAAACTGCTTTGTTCGGGTGTAGCGGGGAGTCTGCTGACAAGGAATATTCGACGTCTGCGTCAAGCTTTAAGGGCGAAACGAGCGGACAATCTGAAGGACAGGCAGATGAAGAGATGGACTCTGTGGCTACCACCGACACGGATCAATATATTAGTTTGGAGATCGGGAAGTTTAGAGAGCCAGCTTTAGAGGCCAGGGTCGAACAACCGCCGGTTATTGGCAGAAATTCATTGAGTAGGTCAAAATACAGGGAATATTCTAAATGTGTGAAGAAGACCGAGGGTTGCAGTGTGATTTGTGTTCATGGGGTTCCCGGCATTGGAAAGACGGAACTTGCTCTGGAATTTGCATACAGATATGCCCAGAGATACAAAATGGTTCTGTGGGTGGGTGGGGAGGCCCCCTATTTCAGGCAGAACATATTGAACCTGTCCATGTGCTTGGGACTGGATGTTAGTGCTGACGAGGAGAAGGAAAGGGGGCGAATTCGAAGCTTTGAAGAGCAAGAACTTGAAGCCTTCAAAAGAGTGAAGAAGGCTCTTTTCCGAGACATGCCTTATTTACTGATTATTGACAATCTCGAGACGGAGAAGGAGTGGTGGGAAGGGAAGAATTTACATGATTTGATCCCAAGGGACACCGGAGGGTCCCACATCATTATCACTACTAGGCTGCCCAAGGTGATGAGTTTTGACACGATGCAACTTCTCACATTGCCCTTCACTGAAGCAATGGTACTGATCAGAGGAACAAGGAAGAAAGACTATCCGGCTGAGGAGTTGGAATATTTGAAGAAATTCGATGAGAAACTGGGAAGATTGAGTTATGGTCTGTGGGTGATAGGGTCACTGCTTTCCGAACTTGGAATCACCCCCTCTTCTCTTTTTGAAGCTATAAGCCAAGTGCCAATTGATGAAGCCTCTTCTACTTGTACTCATATAAGCATCAACGAAGACCAGTACTGCAAAAACAATCATTTCCTGATGAAGATGATATACTTTTGCTATGCATTCAGCCAGCAAACTGAAGGTGGAAAGTATGTCATTGCATCAAGAATGCTCCTTGTGGGTGCCTGGTTCGCCCAAGCGCCTATTTCGGCCACTCTGTTGGCCTCTGCAGCAAACAACACTCCTGCTGCCTCACCAAAGGGATTTGGGAAGTGGGCCAAATGCCTGAGCCTTTCATTCAGTTGCTGCCCCTACTTATCTTCGCAGCATTGCAAGAGCGATGAAGATCCTGCCCATTTTCTGATCAAACTAGGACTTGCACGGAGGGCAAATCCCAGTAAGTATCAACACCCGGCAGCAGGTCTATGGATTCAGTTCCATCCCATCACTCAGTTGTTTTTCAAAAGAAAAGAAGGTTTAGCAGGAGCAAGATCAACCGTTGAAGGTGTGAGGAAGGCGGGTAATCCATTGACGAGCTTTGAACACTTGTGGGCTTCTGCATTTCTAGTGTTTGGTTTCAAATCGGAACCTCCATTGGTCCAACTGAAGGCGCTTGATCTGGTTCTGTACATAGGAAAAACAGCGCTCCCTCTTGCCATTAGGGCCTTCACGAGCTTCTCAAGATGCATCTCGGCATTGGAGCTGCTAAAGGTGTGCACGAATGCACTGGAGGAAGTGGAGAAGTCGTTTGTGTGTCAGATACAAGATTGGTGCCAGATGGAGTACTCACTGTGTTGGAAGAAGAAGAAGAAGGAGAAGGAGAAGGCAGTGCAGAGGGTGGATGAAGACTTGTGGCAGGATGTGACACTGCTGAAGGCCACATTACTTGAAACTAGGGCGAAGTTGCTGCTGAGGGGAGGGCATTTTGACAGCGGTGAAGAATTGTGTAGAACTTGCATCAGTATTAGAAGTGTTATGTTGGGGCATAACCATGCTCAAACCGTGGCAGCTCAAGAGACATTAGCCAAGTTGGTGAGAATGAGGAGCAAGATGTAA 2955 48.09 MALPEEASKSSLTGLSIKTTPHLASSNLNNHPIEPSPYNSPSLVSPPSSAFVSALQSPYISPRATGSQPPAKPTPLTQCECSDDIPSSSYTPPSDHYEFSDGPPLKFVTCSMGDAPASAPPRISFSFPVPRISFGKGGGGGGPISPASTNAKLRSCDVYIGFHGHNPNLVRFSKWLKSELELQGIACFVADRAKYSDNQSHEIADRVICSVAFAVVVVTSSSFVNHFSMEEIRFFSQKKNLIPIFFDSDPGEIMSLLSYNSVDKECKEAVNGVIKCHEFKLEANEGNWRNCLSRTAGILCAKLGRKSAVGADLERLEDLSFPRNNYFVGREKELVEIETALFGCSGESADKEYSTSASSFKGETSGQSEGQADEEMDSVATTDTDQYISLEIGKFREPALEARVEQPPVIGRNSLSRSKYREYSKCVKKTEGCSVICVHGVPGIGKTELALEFAYRYAQRYKMVLWVGGEAPYFRQNILNLSMCLGLDVSADEEKERGRIRSFEEQELEAFKRVKKALFRDMPYLLIIDNLETEKEWWEGKNLHDLIPRDTGGSHIIITTRLPKVMSFDTMQLLTLPFTEAMVLIRGTRKKDYPAEELEYLKKFDEKLGRLSYGLWVIGSLLSELGITPSSLFEAISQVPIDEASSTCTHISINEDQYCKNNHFLMKMIYFCYAFSQQTEGGKYVIASRMLLVGAWFAQAPISATLLASAANNTPAASPKGFGKWAKCLSLSFSCCPYLSSQHCKSDEDPAHFLIKLGLARRANPSKYQHPAAGLWIQFHPITQLFFKRKEGLAGARSTVEGVRKAGNPLTSFEHLWASAFLVFGFKSEPPLVQLKALDLVLYIGKTALPLAIRAFTSFSRCISALELLKVCTNALEEVEKSFVCQIQDWCQMEYSLCWKKKKKEKEKAVQRVDEDLWQDVTLLKATLLETRAKLLLRGGHFDSGEELCRTCISIRSVMLGHNHAQTVAAQETLAKLVRMRSKM 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10185514 10189291 + Conep14aG0130600.1 Cone14ag1274 453123

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1274 984 Pfam NB-ARC domain 429 567 IPR002182 GO:0043531(InterPro)
Cone14ag1274 984 PANTHER DNA REPAIR PROTEIN RADA 149 977 - GO:0000725(PANTHER)
Cone14ag1274 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 636 IPR027417 -
Cone14ag1274 984 Gene3D - 150 313 IPR035897 -
Cone14ag1274 984 MobiDBLite consensus disorder prediction 1 96 - -
Cone14ag1274 984 SMART AAA_5 432 578 IPR003593 GO:0016887(InterPro)
Cone14ag1274 984 MobiDBLite consensus disorder prediction 9 64 - -
Cone14ag1274 984 MobiDBLite consensus disorder prediction 70 95 - -
Cone14ag1274 984 Gene3D - 399 571 IPR027417 -
Cone14ag1274 984 SUPERFAMILY Toll/Interleukin receptor TIR domain 155 257 IPR035897 -
Cone14ag1274 984 MobiDBLite consensus disorder prediction 355 378 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1274 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0297 Cone-Chr12:1617173 Cone14ag1274 Cone-Chr14:10185514 1.59E-190 dispersed
Cone14ag1274 Cone-Chr14:10185514 Cone8ag0290 Cone-Chr8:1686676 1.63E-186 dispersed
Cone14ag1274 Cone-Chr14:10185514 Cone15ag1300 Cone-Chr15:10159878 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g788 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1274 Cone15ag1300 . . . Cme06g02708 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012625 0 1 0 0 0 1 1 1 1 1 3 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 0 1 1 2 29