Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag1278 ATGGAGAGAGTATGGAGACCAGAACAGCTTCAGCTTGGTATCTTTTTCTTGTGCTTGTGCTTGTGCTTGGCGTTGACGCAGTTTTGTTTCTCCAACGCAGCCTCCGGTAGTGCTGAAGACATACACATGTTGATGGCTTTCAAGCGCTCCTCCGTCAGGTCCGATCCAAATGGTTTCTTGGCCGACTGGACGGAGAATGCCGCCACTGCCTGCTCATGGCGTGTCGTTTCTTGCTCTCCTGATGGCCGTGTTAGTATCCTCAACCTCACTAATGCAGGCCTCACTGGGCCCCTTCATCTCCCCTACCTCACTGCCCTTCCATCTCTCAACCATCTCTTCTTGCGCGCCAATTCTTTCTCTTCTGGGGATCTCACCGCCTCCTCCAACACCACCACTTCGTGTCCCCTCCAGACTCTCGACCTCTCCTCCAACAACTTGTCTCTCCCTCTTCCGGCATCATCTTTCCCCCTCTCCTGCTCTCGTCTTGTCTCTCTCAATCTCTCCCGCAATCTCATCTCGGGCAAACTGGGTTCCACTCTCCTCCTGCCTTTCAAAGCTCTGTCCACACTCGACCTCTCCCACAACATGTTGTCTGGTGAGATATCACCACGTTTTGTGGCAGACTCTCCTGCATCCCTCAAGTATCTGGATCTCTCCCATAACAACTTCTCCGGCAACTTCTCCGCCCTTAATTTCGGACCCTGCACCAACCTCACTACTCTCAGGCTAAGTCATAACAACCTTGCAGGGCCTGGGTTTCCATCCAGCTTAGCCAATTGCCTGCTCTTGGAGACGCTGGACTTCTCCCACAATCAGCTGCAGCGCATAATTCCAGGTTCCTTGCTGGGAAATTTCAACAAGTTGACGCAGCTGTATCTAAACCATAATCAGTTTTCTGGGGAGATCCCGCCCGACGTAGGACGCTCTTGCAGAACACTGCAAGAGCTTGATCTATCTGCCAACAAACTCTCTGGTGGGTTGCCTCCCACTTTTTCCTCGTGCTCTTCTCTAGTTTCTCTCAACCTTGGCAACAATCAGCTTTCTGGTGACTTTCTCAGTGCGGTTGTCAGCAACCTCCACAGCCTGAAATATCTCTACCTGCCATTCAACAACATAAGTGGTGTGATTCCTGTGTCTCTCACCAATTGTACTCAGCTTCAAGTGCTGGACCTCAGTTCCAATGCTTTCACAGGGAACATTCCTCCCGGTTTCTGTACCTCCCTAGTTGGCTCCTCCCTGGAAAGGATTCTTCTTCCAAACAACTTTCTCTCTGGGACAGTGCCCCATGAGCTCGGCAACTGCAGCAACCTCAAAACAATTGACCTTAGCTTCAACAGTCTGACTGGCCCCATTCCCCCACAGATTTGGACCTTGCCGAATCTCTCAGACCTCGTCATGTGGGCAAACAACCTAACGGGAGAAATCCCACAAGGCATATGCATTGCTGGAGGCAACCTAGAGATCAACCGGCTTACTGGACAAGTGCCCGCTGGTATAGGAAATCTCCTCAACCTTGCTATCCTCCAATTAGGGGACAATTCACTCACTGGACCGATCCCACCCGAGCTTGGTAAGTGTTGGAACCTTATTTGGCTTGATTTGAATAGCAATGAATTAAATGGTGCTATCCCACCCGAGCTTGCTGACGAAGCTGGCATGATACTCCCGGGAAGTATTTCTGGGAAACAGTTTGCATTTGTCAGGAATGAGGGTGGTACAGCTTGCAGGGGTGCTGGAGGGCTCGTTGAGTTTGTAGGAATCAGGGCAGAGAGGTTGGAAGGGTTTCCTATGGTTCATTCGTGCCCAACCACAAGAATCTACTCTGGCCTTACTATGTATACCTTTGCTAGCCATGGGAGTATGATATACCTTGATCTCGCTTACAATGCCTTGTCAGGAACTATTCCTGAAAATTTTGGTACGATGAACTATCTTCAAGTCTTGAATTTGGGACACAACACATTATATGGACAGATTCCAGACAGTCTTGGCAATTTAAAAGCAATTGGAGTTCTGGACCTCTCTCATAATGATCTCCAAGGATTCATCACGGGATCATTAGGGTCTCTATCTTTTCTTAGCGACCTTGATGTGTCAAACAACAACCTCTCCGGCCCTATCCCCACTGGAGGTCAGTTGATGACTTTTCCGGCATCAAGGTATGAGAATAATTCTGGACTTTGTGGGGTACCCTTGCCTCCTTGTGGCTCTGGAAGCCACCTGGCTACTTTCCACTCCCATGATAAAAGAAAGTGGTCTACTGAGATTGGCATGGTCTTAGGTATCACATTCTTCTTCTTGTGTATCCTCGGACTTTTATTAGCCCTTTATCGCGTGAACAAGTATCAGAATAGGGAGGAAAGAAGAGACAAGTACATTGAAAGCCTCCCAACTTCAGGGAGCAGCAGCTGGAAACTTTCAAGTGCTCCCGAGCCTCTGAGCATCAATATTGCCACATTTGAGAAACCTCTGCGAAAGCTCACTTTTGCCCACCTACTTGAGGCCACAAATGGTTTCAGTGCGGAGAGCTTGATAGGGTCAGGAGGATTCGGTGAGGTTTTCAAGGCACAACTCAAGGATGGCTGCATTGTCGCTATCAAGAAGCTTATCCCCGTCACAGGGCAAGGTGATAGGGAGTTTATGGCAGAAATGGAGACTATAGGGAAAATTAATCACCGAAACCTGGTTCCATTGCTAGGGTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTACGAGTACATGAAGTGGGGCAGTTTGGAGGCTGTTCTTCATGAGAGAGACAAGCGGGACGGTTCAAACTCAAAGCTAAGCTGGGCAGTGAGAAAGAAGATAGCTCTTGGGTCGGCAAGGGGTCTAGCTTTCCTTCATCATAGCTGCATTCCTCACATTATACACAGAGACATGAAGTCTAGTAATGTCCTTTTGGATGAGAATTTTGAGGCAAGAGTTTCTGATTTTGGGATGGCAAGATTGGTAAATGCCCTTGACACCCATCTTAGTGTGAGCACTCTTGCCGGAACTCCGGGATATGTTCCGCCTGAGTACTATCAAAGCTTTAGGTGCACGGCAAAAGGGGATGTCTATAGTTATGGAGTCATATTACTAGAGCTTTTATCTGGCAAGAGGCCTATAGACCCATCACAATTTGGTAATGACAACAATCTTGTTGGATGGGCAAAGCAGCTCCAGAGAGAGAAGAGAACCAATGAGATACTGGACCCCGAGTTGTTGGCACAGAACACAGAAGAGGATGAACTGTATGAGTGTTTAAGCATTGCCTTTGAATGCCTAGAAGACAGGCCTTTCCGTAGACCAACCATGGTTCAGGTAATGGCAATGTTTAAAGAGCTTCAGGTCAATATGGACGATGTCCTTGATGGTTTCTCGCTGAAAGACTCTTATGTGGAGGAGGAGCCATGA 3423 48.38 MERVWRPEQLQLGIFFLCLCLCLALTQFCFSNAASGSAEDIHMLMAFKRSSVRSDPNGFLADWTENAATACSWRVVSCSPDGRVSILNLTNAGLTGPLHLPYLTALPSLNHLFLRANSFSSGDLTASSNTTTSCPLQTLDLSSNNLSLPLPASSFPLSCSRLVSLNLSRNLISGKLGSTLLLPFKALSTLDLSHNMLSGEISPRFVADSPASLKYLDLSHNNFSGNFSALNFGPCTNLTTLRLSHNNLAGPGFPSSLANCLLLETLDFSHNQLQRIIPGSLLGNFNKLTQLYLNHNQFSGEIPPDVGRSCRTLQELDLSANKLSGGLPPTFSSCSSLVSLNLGNNQLSGDFLSAVVSNLHSLKYLYLPFNNISGVIPVSLTNCTQLQVLDLSSNAFTGNIPPGFCTSLVGSSLERILLPNNFLSGTVPHELGNCSNLKTIDLSFNSLTGPIPPQIWTLPNLSDLVMWANNLTGEIPQGICIAGGNLEINRLTGQVPAGIGNLLNLAILQLGDNSLTGPIPPELGKCWNLIWLDLNSNELNGAIPPELADEAGMILPGSISGKQFAFVRNEGGTACRGAGGLVEFVGIRAERLEGFPMVHSCPTTRIYSGLTMYTFASHGSMIYLDLAYNALSGTIPENFGTMNYLQVLNLGHNTLYGQIPDSLGNLKAIGVLDLSHNDLQGFITGSLGSLSFLSDLDVSNNNLSGPIPTGGQLMTFPASRYENNSGLCGVPLPPCGSGSHLATFHSHDKRKWSTEIGMVLGITFFFLCILGLLLALYRVNKYQNREERRDKYIESLPTSGSSSWKLSSAPEPLSINIATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVFKAQLKDGCIVAIKKLIPVTGQGDREFMAEMETIGKINHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHERDKRDGSNSKLSWAVRKKIALGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDPSQFGNDNNLVGWAKQLQREKRTNEILDPELLAQNTEEDELYECLSIAFECLEDRPFRRPTMVQVMAMFKELQVNMDDVLDGFSLKDSYVEEEP 1140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10219443 10222952 - Conep14aG0131000.1 Cone14ag1278 453127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag1278 1140 Gene3D Transferase(Phosphotransferase) domain 1 915 1130 - -
Cone14ag1278 1140 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 353 554 - -
Cone14ag1278 1140 FunFam Leucine-rich repeat receptor protein kinase EMS1 253 352 - -
Cone14ag1278 1140 SUPERFAMILY L domain-like 63 348 - -
Cone14ag1278 1140 FunFam serine/threonine-protein kinase BRI1-like 2 800 914 - -
Cone14ag1278 1140 ProSiteProfiles Leucine-rich repeat profile. 262 283 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine rich repeat N-terminal domain 38 79 IPR013210 -
Cone14ag1278 1140 SUPERFAMILY Protein kinase-like (PK-like) 820 1116 IPR011009 -
Cone14ag1278 1140 Pfam Protein kinase domain 841 1113 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1278 1140 SMART LRR_typ_2 383 407 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 359 382 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 285 309 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 263 283 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 184 208 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 106 129 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 458 482 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 666 689 IPR003591 -
Cone14ag1278 1140 SMART LRR_typ_2 502 526 IPR003591 -
Cone14ag1278 1140 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 417 1116 IPR051716 -
Cone14ag1278 1140 Pfam Leucine rich repeat 623 679 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine rich repeat 287 347 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich repeat 235 252 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 614 734 - -
Cone14ag1278 1140 Pfam Leucine Rich Repeat 504 526 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 136 152 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 212 227 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 263 281 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 361 383 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 436 458 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 187 205 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 528 548 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Leucine Rich Repeat 385 405 IPR001611 GO:0005515(InterPro)
Cone14ag1278 1140 Pfam Brassinosteroid receptor island domain 552 615 IPR045381 -
Cone14ag1278 1140 Gene3D - 559 615 - -
Cone14ag1278 1140 ProSiteProfiles Protein kinase domain profile. 839 1118 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1278 1140 Gene3D Phosphorylase Kinase; domain 1 801 914 - -
Cone14ag1278 1140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag1278 1140 Gene3D Ribonuclease Inhibitor 33 742 IPR032675 -
Cone14ag1278 1140 SUPERFAMILY L domain-like 254 722 - -
Cone14ag1278 1140 SMART serkin_6 839 1115 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag1278 1140 FunFam Serine/threonine-protein kinase BRI1-like 1 559 616 - -
Cone14ag1278 1140 FunFam Brassinosteroid LRR receptor kinase 915 1120 - -
Cone14ag1278 1140 ProSitePatterns Protein kinases ATP-binding region signature. 845 868 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1278 Cone-Chr14:10219443 Cone6ag1315 Cone-Chr6:10561015 1.16E-189 dispersed
Cone6ag1671 Cone-Chr6:12702590 Cone14ag1278 Cone-Chr14:10219443 1.41E-51 dispersed
Cone8ag1202 Cone-Chr8:10219306 Cone14ag1278 Cone-Chr14:10219443 4.78E-43 dispersed
Cone9ag1593 Cone-Chr9:11419790 Cone14ag1278 Cone-Chr14:10219443 6.09E-52 dispersed
Cone14ag1278 Cone-Chr14:10219443 Cone15ag1304 Cone-Chr15:10182636 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82119 PF00445 Ribonuclease_T2 7.10E-20 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag1278 - - - 0.0