Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0027 ATGAGCTACCCGCAAGAGAAACTCGTAAGGTTTCACGATGAATGGAACTTAGACAAACCTTCTCAGGGTTTGTATTCTGCAGATACTGGAACAAACCCAAGAAAGTTTAGAACAAGAGTTTACTCGGTCTCTGAAAAGTTTCAAAGAGGCTTGGAATCAGGTTCTGACCGAATCAAAAGGGTTAAAAAATCATTCAAATCCACTTCCTTTAATACTTTTGTGGCCAAAGGCTTGGGTCCCAGGAAGAAAATCCTCGATCCCCAAGGACCTTTTCTTCAGAAATGGAACAAGATATTTGTAATGTCTTGTGTTCTTGCCGTCTCATTGGATCCTTTGTTCTTCTACGTCCCTGTGATTGATGATGATAGGAAGTGTCTTGGGCTGGACAGGAAGATGGAAATCACGGCTAGTGTTTTGCGTTCATTCACTGACATATTTTATATAGTACATATAATTTTTCAATTCCGTACTGGGTTTATCGCCCCCTCTTCTAGAGTATTTGGAAGAGGTGTTTTAGTCCATGATGCTTGGGCAATAGCAAAGAGGTATTTGGCCTCATATTTTCTTATCGACATTCTAGCCGTTCTCCCACTTCCTCAGGTGGTGATTCTAATTATTATTCCGGGAATGAGTGGATCAGAGTCGTTGAACACAAAGAATCTGCTGAAATTTGTTGTTTTCTTTCAATATATACCAAGAGTTCTTAGAATCTATCCTCTGTACAAGGATGTCACGAGGACTTCTGGTATACTCACTGAAACTGCATGGGCCGGAGCTGCATTTAATCTTTTTCTTTACATGCTAGCTAGTCATGTATTTGGAGCATTCTGGTACTTGTTTTCTATAGAACGAGAAACCACTTGCTGGCAGCGTGCTTGTCGGAAACAGACCGGCTGCAGCCGCAGCTCACTGTACTGTGATTATGGGGCCGCAGATAATCAATTTTTGAACGTTTTGAATGCTTCTTGTCCAATACAAGAAGCTAACACAACACTTTTTGATTTTGGAATATTCCTTGATGCACTTCAATCTGGTGTTGTGGAGTCCAGGGATTTCCCACAGAAATTGTTTTACTGTTTCTGGTGGGGCTTAAGAAATCTGAGTTCGCTTGGTCAAAATCTTGCGACCAGTACATATGTTTGGGAAATCTGCTTTGCAGTTTTCATCTCCATATCTGGCTTGGTTTTATTTTCATTTCTCATCGGAAATATGCAGACATATTTGCAATCCACGACTACCAGACTAGAGGAAATGAGAGTGAAAAGGCGAGACGCAGAACAATGGATGTCACACCGTTTACTCCCCGAGAGTTTGAGGGAGCGGATCAGAAGATACGAACAGTACAAGTGGCAAGAAACCAGAGGTGTTGACGAAGAGAATCTGGTCCGGAATCTTCCGAAAGATCTCAGAAGGGACATAAAGCGTCATCTCTGCTTGGCTCTTCTCATGAGGGTGCCCATGTTTGAGAAGATGGATGAACAACTACTGGACGCAATGTGTGACCGTCTCAAGCCAGTACTGTACACAGAGGAGAGCTATGTTGTTAGGGAAGGAGACCCTGTTGACGAGATGCTCTTCATCATGCGAGGCAAGCTATTGACCATGACTACTAATGGTGGAAGAACCGGTTTCTTCAATTCTGAATACTTAAAGGCAGGAGACTTTTGTGGAGAAGAACTATTCACATGGGCTCTAGACCCACATTCCTCAACTAATCTACCCATCTCGACTAGAACTGTTCGAGCCCTTAAAGAAGTAGAGGCCTTTGCTCTGAAAGAGTATGACCTAAAGTTTGTAGCATCTCAGTTTAGGAGACTTCATAGTAAGCAGTTAAGACACACTTTCCGGTTTTATTCACAGCAGTGGAGGACTTGGGCTGCTTGTTTTATACAGGCGGCTTGGCGCAGGTATTGTAAGAAGAAGTCGGAAGAGTCTCTACGTGAAGAAGAGAATAGGTTGCAAGATGCATTGGCCAAGGCAAATGGGAGTTCTCCTAGTCTGGGCGCTACTATTTATGCATCACGGTTTGCTGCAAATGTGCTTAAAGCCTTGAGGCGGAATGGGACAAGGAAGGGTAGGGTGCCTGAGAGAATACCTCCCATGATGCTTCAAAAGCCGGCAGAGCCTGATTTTACTTCCGAAGAAAATAGGTAG 2154 43.27 MSYPQEKLVRFHDEWNLDKPSQGLYSADTGTNPRKFRTRVYSVSEKFQRGLESGSDRIKRVKKSFKSTSFNTFVAKGLGPRKKILDPQGPFLQKWNKIFVMSCVLAVSLDPLFFYVPVIDDDRKCLGLDRKMEITASVLRSFTDIFYIVHIIFQFRTGFIAPSSRVFGRGVLVHDAWAIAKRYLASYFLIDILAVLPLPQVVILIIIPGMSGSESLNTKNLLKFVVFFQYIPRVLRIYPLYKDVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETTCWQRACRKQTGCSRSSLYCDYGAADNQFLNVLNASCPIQEANTTLFDFGIFLDALQSGVVESRDFPQKLFYCFWWGLRNLSSLGQNLATSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESYVVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLKAGDFCGEELFTWALDPHSSTNLPISTRTVRALKEVEAFALKEYDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKSEESLREEENRLQDALAKANGSSPSLGATIYASRFAANVLKALRRNGTRKGRVPERIPPMMLQKPAEPDFTSEENR 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 201417 205413 - Conep15aG0002800.1 Cone15ag0027 453155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0027 717 Gene3D Jelly Rolls 485 605 IPR014710 -
Cone15ag0027 717 Coils Coil 639 663 - -
Cone15ag0027 717 CDD CAP_ED 487 618 IPR000595 -
Cone15ag0027 717 Pfam Ion transport protein 99 414 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone15ag0027 717 MobiDBLite consensus disorder prediction 688 717 - -
Cone15ag0027 717 ProSiteProfiles cAMP/cGMP binding motif profile. 487 571 IPR000595 -
Cone15ag0027 717 Gene3D - 98 411 - -
Cone15ag0027 717 SMART cnmp_10 487 618 IPR000595 -
Cone15ag0027 717 FunFam Cyclic nucleotide-gated ion channel 1 485 603 - -
Cone15ag0027 717 SUPERFAMILY cAMP-binding domain-like 416 609 IPR018490 -
Cone15ag0027 717 FunFam Cyclic nucleotide-gated ion channel 1 414 478 - -
Cone15ag0027 717 Gene3D Helix hairpin bin 413 478 - -
Cone15ag0027 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 66 706 - -
Cone15ag0027 717 SUPERFAMILY Voltage-gated potassium channels 86 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0024 Cone-Chr14:200364 Cone15ag0027 Cone-Chr15:201417 6.18E-197 dispersed
Cone14ag0025 Cone-Chr14:203913 Cone15ag0027 Cone-Chr15:201417 0 dispersed
Cone15ag0027 Cone-Chr15:201417 Cone2ag0580 Cone-Chr2:3369644 1.57E-262 dispersed
Cone15ag0026 Cone-Chr15:198240 Cone15ag0027 Cone-Chr15:201417 1.41E-97 tandem
Cone1ag1209 Cone-Chr1:55940193 Cone15ag0027 Cone-Chr15:201417 1.89E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0027 K05391 - csv:101221781 1177.54