Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0037 ATGGGAATTGTCGGGAAACTGCAGCACGAGAATGTGGTTACTCCAAGAGCATATTATTATTCAAAAGAGGAAAAAGCTTATGATAAGAGAGGAGAGGGTCGGATTCCATTAGATTGGAAAACCAGAATAAGAATCGCAATTGGGGCGGCAAAAGGGATTGCTTATATCCATTCAGAATTGGTTTCTGGAGGATATGGTTGTGTCTCAGATATCGGTTGGGCGACACTGACAAGCCAAATGGCCCCACATGAAAGAAGGATTGCGGGATATATGGCTCCGGAAGTGAGAGATGCTCGGAAAGCATCCCATGCTTCTGATGTGTATATTTTTGGGGTCTTTCTTCTTGAGCTTTTGACCGGGAAATCTCCCGTACAGGCCAGAGGGGGTGAAGAGGTTGTTAATTTGGTGAGATGGGTGAATTCTGTGGTCCGAGAAGAGTGGACAGCAGAGGTGTTTGATATTGAGCTGTTGAGGTACGTTAATATTGAGGGAGAACTGGAGGAGATGTTACACATAGCATTATCTTGTGCTGTGAGATGGCCCGAGAATAGACAGCATATGGCTGACATTGCGGCTCGGGTCGAGCAAGTTGGTAGTCAAGGGAATCCCGAGAATCAACCATCATCGGAATTTTCAACACAGCCTCGTATGACTGTGACTGAGATTGGATCGACATCAAATACTCATTAA 690 45.36 MGIVGKLQHENVVTPRAYYYSKEEKAYDKRGEGRIPLDWKTRIRIAIGAAKGIAYIHSELVSGGYGCVSDIGWATLTSQMAPHERRIAGYMAPEVRDARKASHASDVYIFGVFLLELLTGKSPVQARGGEEVVNLVRWVNSVVREEWTAEVFDIELLRYVNIEGELEEMLHIALSCAVRWPENRQHMADIAARVEQVGSQGNPENQPSSEFSTQPRMTVTEIGSTSNTH 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 259168 260028 - Conep15aG0003800.1 Cone15ag0037 453165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0037 229 SMART tyrkin_6 1 194 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Cone15ag0037 229 MobiDBLite consensus disorder prediction 198 229 - -
Cone15ag0037 229 Gene3D Transferase(Phosphotransferase) domain 1 24 205 - -
Cone15ag0037 229 Pfam Protein tyrosine and serine/threonine kinase 68 143 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag0037 229 MobiDBLite consensus disorder prediction 197 229 - -
Cone15ag0037 229 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0037 229 PANTHER OS05G0588300 PROTEIN 1 204 IPR050994 -
Cone15ag0037 229 SUPERFAMILY Protein kinase-like (PK-like) 3 193 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0037 Cone-Chr15:259168 Cone8ag0259 Cone-Chr8:1498559 5.73E-68 dispersed
Cone14ag0036 Cone-Chr14:262524 Cone15ag0037 Cone-Chr15:259168 4.58E-128 wgd
Cone15ag0037 Cone-Chr15:259168 Cone5ag0660 Cone-Chr5:2816135 2.96E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82121 PF00520 Ion_trans 9.90E-31 CL0030 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0037 - - - 0.0