Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0066 ATGCAATCTGGGTTCACCGGAGGTGACGTTCCGGACGTTTACACGGCAAGCAGAGCGATCGGGACTGCCATGGCTAACCACCACCCATCATCTCAGCACAATCCATACAGATCCCAACTTCCCGGCGGCTCCAATTTCATCGACCCAGCCTCCCAAATATCGCGCCAATTCCCGGCAAGCTCCTCCTCCGTGATCGGGAAGCGCTACCTCGCCGATTTCCAAACCCAATACCAACACAACCAAGCGCTAAGCAACCTCTTACTCCGCTCTGTAAAACCCAGAAGTTACAACCAACAGCCATCCCCTGTTTCCCATCTTTCTCACATCGACTTCTCTTCGACGATGTCGTTTCCGTCTTCGTCTGAGCTTCAATCTCACCGCCTTCTCCAGCAACTGCGCCCTCACCCGATGTCTATACCCATGACGAATTCCGGCCTCCATGAGCTACCTTATTCTGCTTCGGTTCAGACCCGGTCCGTTTCTGCCCACGAATCTGAGACGAAGATGATGAATCACCGCCTGCAGGAGCTCGAGAAACAGCTTCTAGACGATAACGATGAAGATGACGCAGCCGATGAAGTTTCTGTAATCACTAATACAAACAGTGAGTGGTCGGAAACCATACAGAATCTGATCAGTCCGACTCAGAGCCAGAGTCAGAAATCAATCTCGCCCTCTCCGACTTCTTCAACGTTGTCTTCTTCTTCGTCGTCCTCATCTGTAGGCTCTCAAGCCTCCTTGTGCTGGAAACAGTCTGTCATGGAGGCTGCCTCTGTCATTTACGAAGGGAAATCGGAGCAAGCAACGGAGATCCTAACGCGCGTTTCGTCTCAAATTCCAAACGTCAAAGTTCATTCTGAACAGAGGTTGATGGAGTTCATGGTTTCTGCTCTGAAATCCCGTTTGAACGCGACGGAAAACCCGCCGCCGGTTACAGAACTGTATGATCTCGAACACACCGCGTCGACTCAGTTGTTATACGAGGTCTCGCCCTGTTTCAAACTCAGCTTCGTGGCGGCCAATCTCGCCATTCTTGAAGCCTTTGCTGTTCAAGGTGAAGAGAGCAATTGCAGTAAATTTCATGTCTTGGATTTTGATATAGGTCAAGGCGGCCAGTATCTGAATCTTCTTCACATGCTTTCGACGCAACGTCAGAGCGGTACGAAGCCCCAGGCGGCCGTTTTTAAGCTGACAACTATGGCAGAAAATGGTGGTGAAGAGAGGTTGAAGAAAGCGGGTGAAATGCTGAGTCAACACGCCGAACGAGTCGGCGTGAGTTTCAAATTAAACATTATGAGCCCAGTGCAGGTCTCCGATTTGAATCGCGACTCACTGGATTGTGAACCGGACGAACCGCTCGCCGTGAATTTCGCTTTCAAACTGTACAGGATGCCGGACGAGAGCGTCTCCACCGAGAATCCACGAGACGAGCTTCTCCGGCGCGTGAAGGGATTATCCCCCCGCGTCGTGACGGTTGTCGAGCAGGAGATGAACACAAACACTGCGCCGTTTCCAAATCGCGTGGCGGAAACGAGCGCGTACTACGGATCGTTGCTCGACTCGATTGAGTCGACTGTAGGAAGGGAGAACTCGGACCGAGTCAAGGTAGAGGAAGGACTGGGTCGGAAGCTAGTTAACTCGGTTGCTTGTGAAGGGAGGGATCGGGTCGAGAGATGCGAGGTTTTCGGTAAGTGGCGGGCCCGGTTGGGAATGGCGGGGTTCGAGTTGAAGCCACTGAGTCAAACCGTCGCTGAGTCGATGAGAACTCGACTGAGTACAGGGTCTCGAGTCAACCCCGGTTTCACCGTTAAGGAAGATAACGGAGGCGTTTGCTTTGGTTGGTTAGGTCGGACTCTCACCGTCGCATCTGCGTGGCGTTAA 1881 52.42 MQSGFTGGDVPDVYTASRAIGTAMANHHPSSQHNPYRSQLPGGSNFIDPASQISRQFPASSSSVIGKRYLADFQTQYQHNQALSNLLLRSVKPRSYNQQPSPVSHLSHIDFSSTMSFPSSSELQSHRLLQQLRPHPMSIPMTNSGLHELPYSASVQTRSVSAHESETKMMNHRLQELEKQLLDDNDEDDAADEVSVITNTNSEWSETIQNLISPTQSQSQKSISPSPTSSTLSSSSSSSSVGSQASLCWKQSVMEAASVIYEGKSEQATEILTRVSSQIPNVKVHSEQRLMEFMVSALKSRLNATENPPPVTELYDLEHTASTQLLYEVSPCFKLSFVAANLAILEAFAVQGEESNCSKFHVLDFDIGQGGQYLNLLHMLSTQRQSGTKPQAAVFKLTTMAENGGEERLKKAGEMLSQHAERVGVSFKLNIMSPVQVSDLNRDSLDCEPDEPLAVNFAFKLYRMPDESVSTENPRDELLRRVKGLSPRVVTVVEQEMNTNTAPFPNRVAETSAYYGSLLDSIESTVGRENSDRVKVEEGLGRKLVNSVACEGRDRVERCEVFGKWRARLGMAGFELKPLSQTVAESMRTRLSTGSRVNPGFTVKEDNGGVCFGWLGRTLTVASAWR 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 372697 375113 - Conep15aG0006800.1 Cone15ag0066 453194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0066 626 ProSiteProfiles GRAS family profile. 240 626 IPR005202 -
Cone15ag0066 626 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 230 625 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone15ag0066 626 MobiDBLite consensus disorder prediction 212 241 - -
Cone15ag0066 626 Pfam GRAS domain family 251 626 IPR005202 -
Cone15ag0066 626 Coils Coil 160 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0066 Cone-Chr15:372697 Cone4ag1449 Cone-Chr4:11499843 3.31E-82 dispersed
Cone14ag0063 Cone-Chr14:349890 Cone15ag0066 Cone-Chr15:372697 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44811 PF00004 AAA 5.60E-38 CL0023 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0066 K27748 - csv:101214171 635.95