Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0075 ATGCTCACATGGTGGGGGAAGTCATCAGCCAAGGAAGTGAAGAAGAAGACAGGCAAGGACGGTTTCATTGAGACATTACAAAGAAGATTTAAAAGTGCATCTGATGGTAAAGTTAACAGAAGATCTGGTGGGTCCCGACGACATCGTAGTGACACAATTTCTGAGAAGGGATCCCATTCCCCTCTAGAATCAACATCACCTTCACCTTCCAAACTAGTGTCTAGATGTCAAAGTTTTTCAGAAAGGCCACAGGCTCAGCCCCTTCCACTTCCCAGTTTGCACCCTGTAGCTGTAGGTCGTACAAACTCGGGAATCAGCATACCGGTAAAACCAAGATCAGATGGAGGCTCCAAGTCATCATCATTTCTTCCACTTCCAAGACCAGCGTGCATCCGTGGTAGGGCGAATCCCACTGATTTAGATGGAGAATCAATGACATGCTCTGTGTCTAGTGGATGCTCTATTGACAGTGATGATCAAGCTGACTCACATCATCATAGTCCTCAGGCAACTGATTATGATATTGGGACTAAAGCTGCTGCAGAGAGCCCTCCCAAGGTTGTTCTCAGTGATCAATCTGCTACTGTCACTTCAAGGGAGGTGAAAAAACCAGCCAACATGTCACTTGGTAACCATAATTCCTCAACGTCGCCTAAGAAGAGGGCTTTCAGAAGTCAAGTGCCAAATCTGCAGGTTCCACCTTTTCACGGGGCTTTTGCTAGTGCTCCTGTTAGCTCCATGTCAAGTCCTTCTAGAAGTCCATTAAGAGCATCTAGCACTGAGCAAGTAGTGAACACTGCTCTATTACCTGTGAAGCCTTATTCGGACATCACTCTAGCTGGGTCTGGTCATAGCTCTAGTCCTGGTTCAGGTCAGAATTCTGGGCATAATTCAATGGGAGGTGATATTTCAGGCCAATTATTTTGGCCGCAAAGCAGGGGAAGCCCCGAATATTCTCCAGTGCCTAGCCCTAAATTGGCTAGCCCTGGTCCTAGCTCCAGAATTCAAAGTGGTGCTGTCACACCTATTCATCATAGAGCAGGAGGGACACTAACTGAGTCACTGACAAACTGGCCTGATGAGAAACAAAGTCACCGTTTGCCCCTCCCCCCTCTAGCAATTTCAAATCCTCCCTTCTCACACTCAAATTCAGCTGTGACATCTCCATCTGTGCCAAGAAGTCCAGGAAGGGCAGAGACTCCAGCAAGCCCTGGCTCACGCTGGAAAAAGGGGAGGCTCCTTGGCACAGGAACATTTGGACATGTTTATGTTGGTTTTAATAGCGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACATTATTCTCTGAAGATGCAAAGTCAAAGGAAAGTGCCAAGCAATTAATGCAGGAAATTGCACTATTGAGTCGTTTACGGCATCCAAACATTGTGCAGTATTATGGTTCTGAAGCAGTAGGTGACAAACTATACATATATCTAGAGTATGTATCTGGTGGCTCCATTTATGAACTTCTCCAAGAATATGGACAGTTTGGGGAGCTGGCAATTCGTAGTTATACTCAGCAAATATTGTCAGGGCTTGCATATTTACATGCTAAAAGTACCGTCCATAGGGATATAAAAGGAGCAAATATACTTGTTGACCCGAATGGCTGTGTAAAGTTGGCAGATTTTGGGATGGCAAAGCATATCACTGGACAATCATGTCCTTTTTCATTCAAGGGCAGTCCCTACTGGATGGCACCTGAGGTTATTAAAAACTCAAATGGTTGCAATCTTGCTGTGGATATTTGGAGTCTCGGATGCACTGTTTTGGAGATGGCTACGACAAAACCTCCTTGGAGCCAATACGAAGGGGTTGCCGCCATGTTTAAGATCGGTAATAGCAAAGAACTACCTGTAGTTCCAGATCACCTTTCAGTTGATGGGAAGGATTTTGTGAGGCAATGTTTGCAACGAAATCCACTTCATCGGCCTACAGCTCTTAAACTTTTGGAGCATCCTTTTGTCCAACATGCTACTCCTCTAGAAAGACCTATGCTAGGCCTTGAACCTCCAGATCCAACCTTTGGGGTTGCTAATGGAATTAAAAATCTGGTAATCGGGCAAGTTAAGAATCTTAACACCATAGATTCATATAGACTTGCAGTTCATTCCTCTCGAGTCTCAAGAGCTGGTTTCCAAGCCAATGAAATACATATTCCGAGGAACATATCATGTCCTGTTTCACCGATTGGAAGCCCTCTTTTGAACTCAAAGTCACCACAACACCCCAATGGAAGAATGTCCCCTTCTCCTATTTCTAGCCCACTAACCACTTCAGGCTCATCCACACCTTCAACAGCCGGTGGTGGTGCCATTCCATATAACCACATCAAACACTCTCTGTACTTGCAAGAAAGTCTTGGAAGCATGCCAAAATCGCCGAAATTGCCAAACAGTCCCTACGGTAATGTCCTGCCGTATCAGAGTTCAAATCCTGATATCTTCCGGGCAATTCAACCCGGGCCCCACATCTTCCCAGAACTGATCCATTCCGAAAATGACGTTCTGGGAAAGCAGTTTGGTGGAAGACCTGTCTGTGGAGAAATCTATGACGGACAATCTGTCTTGGCTGATCGTGTTTCAAGGCAGCTCTTGAAGGATCATGCTAAAATGAACCCATCCTTCGATTTAAGCCCCAACTCTCCTCTGCCTAGCCACCCTAGCGGTATCTAG 2700 45.59 MLTWWGKSSAKEVKKKTGKDGFIETLQRRFKSASDGKVNRRSGGSRRHRSDTISEKGSHSPLESTSPSPSKLVSRCQSFSERPQAQPLPLPSLHPVAVGRTNSGISIPVKPRSDGGSKSSSFLPLPRPACIRGRANPTDLDGESMTCSVSSGCSIDSDDQADSHHHSPQATDYDIGTKAAAESPPKVVLSDQSATVTSREVKKPANMSLGNHNSSTSPKKRAFRSQVPNLQVPPFHGAFASAPVSSMSSPSRSPLRASSTEQVVNTALLPVKPYSDITLAGSGHSSSPGSGQNSGHNSMGGDISGQLFWPQSRGSPEYSPVPSPKLASPGPSSRIQSGAVTPIHHRAGGTLTESLTNWPDEKQSHRLPLPPLAISNPPFSHSNSAVTSPSVPRSPGRAETPASPGSRWKKGRLLGTGTFGHVYVGFNSESGEMCAMKEVTLFSEDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSEAVGDKLYIYLEYVSGGSIYELLQEYGQFGELAIRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPNGCVKLADFGMAKHITGQSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVVPDHLSVDGKDFVRQCLQRNPLHRPTALKLLEHPFVQHATPLERPMLGLEPPDPTFGVANGIKNLVIGQVKNLNTIDSYRLAVHSSRVSRAGFQANEIHIPRNISCPVSPIGSPLLNSKSPQHPNGRMSPSPISSPLTTSGSSTPSTAGGGAIPYNHIKHSLYLQESLGSMPKSPKLPNSPYGNVLPYQSSNPDIFRAIQPGPHIFPELIHSENDVLGKQFGGRPVCGEIYDGQSVLADRVSRQLLKDHAKMNPSFDLSPNSPLPSHPSGI 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 412549 417762 + Conep15aG0007700.1 Cone15ag0075 453203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0075 899 MobiDBLite consensus disorder prediction 376 394 - -
Cone15ag0075 899 SMART serkin_6 408 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0075 899 MobiDBLite consensus disorder prediction 279 318 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 279 338 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 880 899 - -
Cone15ag0075 899 CDD STKc_MEKK1_plant 407 664 - -
Cone15ag0075 899 Gene3D Transferase(Phosphotransferase) domain 1 406 675 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 739 779 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 188 224 - -
Cone15ag0075 899 SUPERFAMILY Protein kinase-like (PK-like) 406 748 IPR011009 -
Cone15ag0075 899 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 669 IPR050538 -
Cone15ag0075 899 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524(InterPro)
Cone15ag0075 899 MobiDBLite consensus disorder prediction 57 85 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 350 410 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 242 261 - -
Cone15ag0075 899 FunFam Mitogen-activated protein kinase kinase kinase 406 684 - -
Cone15ag0075 899 Pfam Protein kinase domain 409 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0075 899 MobiDBLite consensus disorder prediction 141 157 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 739 778 - -
Cone15ag0075 899 MobiDBLite consensus disorder prediction 27 261 - -
Cone15ag0075 899 ProSiteProfiles Protein kinase domain profile. 408 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag0075 899 MobiDBLite consensus disorder prediction 883 899 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0075 Cone-Chr15:412549 Cone8ag0019 Cone-Chr8:140232 9.74E-134 dispersed
Cone1ag1174 Cone-Chr1:55782217 Cone15ag0075 Cone-Chr15:412549 0 wgd
Cone14ag0072 Cone-Chr14:390001 Cone15ag0075 Cone-Chr15:412549 0 wgd
Cone15ag0075 Cone-Chr15:412549 Cone5ag0881 Cone-Chr5:3773994 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82122 PF02889 Sec63 8.00E-14 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0075 K20717 - rcu:8280992 1236.86