Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0083 | ATGGGTTTTTTCAATCTTGATTTGCTTCTTACTTTTGGCATAGTAATAGTACAAGGGTTGCTTGTTTTCATGTTCTTGAACATCTCTCTTTCCTGTTGGATCTTACCGATTTGGACTTATTGGAAACTTAAGAGAAATGGGTTTCATGGTCCATCTCCTAGTTTCCCTCTAGGAAATATCAGTGACATGAAAAAGAAGATCAAACCTTCTTCTTCTTCTTCTTCTTTACTTATAACTCATGACATACATTCCGCTGTCTTTCCCTTCTTTTCCCGCTGGCAATCTTCCCACGGGAAGATGTTTCTATATTGGCTGGGGACGGAGCCATTTCTATACGTTGCAGACCCAGAAATCTTAAAGAAAGTGTCAGCAGAGGTGATGGGAAAAAGCTGGGGTAAGCCTACTGTGTTCAAAAACGACAGAGAACCCATGTTCGGGAAAGGATTGGTCATGGTTGAAGGTGATGAATGGGTTCGTCACAGGCATGTCATCACACCTGCATTCAACCCCACCAACTTAAAGGCTATGGCAGGTTTAATGGTTGAATCCACCACCCAAATGCTAGACAGATGGGCTGAGCTTATAAATTCCGGCCACCCCGAAATTGACGTGGAGAGGGAAATCACGGCCACGGCCGGAGAAATCATCGCAAAGACGAGCTTCGGAGTCGAACACCATAGCGGAAGGCTGGTGTTTGAAAAACTAAGAGCTTTGCAACAGACACTGTTTCAGACAAACCGTTACGTAGGGGTTCCTTATAGCAAGTTCTTGTACCCTACAAAAGCGCTAGAAGCCAAGAGGCTTGGGAAAGAGATTGACGAGCACTTTCTATCAATAATTGCTGCGAGAAGATCAAGTTCAGTTAAGGGGAACGTTAACTCTAATCAGTCGCAGGATTTGCTTAGTCTATTGCTGAAAGAGAATCACGTGGAAGGAAGATTAGGGAAGACACTGACGACTAGAGAACTCATTGATGAGTGCAAGACGTTTTTCTTCGGCGGGCATGAGACGACAGCTTTGGCCATCACGTGGACGTTGCTACTTCTGGCCATGCATCCCAAGTGGCAGAATGAGTTGAGGATTGAGATTAGGCATGTTCTTGGTGATAAAGAGATCGATTTCGATTACACAAAGCTTGCTGGTCTAAAGAAGATGGGATGGGTGATGAATGAGGTACTTAGGTTATACCCTTCGGCACCAAATGCACACAGACAAGCAAGAAGTGACATTCAAATAAACAAGTCCCTAACAATCCCAAACGGGACCAACATCTGGATCGACATAGTAGCCATGCACCACGATCCGGCTCTATGGGGTGAAGACGTTAATGAGTTCAAGCCGGAAAGATTCATGGACGATCCTTACGGCGGGTGCAACCACAAGATGGGGTTCCTTCCCTTTGGATTCGGAGGAAGAATGTGTGTTGGCAAAAACTTGAGCGCTATGGAGTACAAGATTGTCCTAACACTTATCTTGTCCCGGTTTTCTTTCTCTCTTCTGCCTACGTACCGCCATTCTCCGGCTATCTTGCTCTCTCTTCGACCTTCCTTTGGTTTGCCTCTCCTTCTTCACCCCCTTAGAGAGAAATTATAG | 1593 | 45.2 | MGFFNLDLLLTFGIVIVQGLLVFMFLNISLSCWILPIWTYWKLKRNGFHGPSPSFPLGNISDMKKKIKPSSSSSSLLITHDIHSAVFPFFSRWQSSHGKMFLYWLGTEPFLYVADPEILKKVSAEVMGKSWGKPTVFKNDREPMFGKGLVMVEGDEWVRHRHVITPAFNPTNLKAMAGLMVESTTQMLDRWAELINSGHPEIDVEREITATAGEIIAKTSFGVEHHSGRLVFEKLRALQQTLFQTNRYVGVPYSKFLYPTKALEAKRLGKEIDEHFLSIIAARRSSSVKGNVNSNQSQDLLSLLLKENHVEGRLGKTLTTRELIDECKTFFFGGHETTALAITWTLLLLAMHPKWQNELRIEIRHVLGDKEIDFDYTKLAGLKKMGWVMNEVLRLYPSAPNAHRQARSDIQINKSLTIPNGTNIWIDIVAMHHDPALWGEDVNEFKPERFMDDPYGGCNHKMGFLPFGFGGRMCVGKNLSAMEYKIVLTLILSRFSFSLLPTYRHSPAILLSLRPSFGLPLLLHPLREKL | 530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 440678 | 443300 | + | Conep15aG0008500.1 | Cone15ag0083 | 453211 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0083 | 530 | PRINTS | P450 superfamily signature | 465 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | P450 superfamily signature | 474 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | P450 superfamily signature | 387 | 398 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | Gene3D | Cytochrome P450 | 33 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 28 | 519 | IPR050665 | GO:0004497(PANTHER) | |
| Cone15ag0083 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 467 | 476 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | E-class P450 group I signature | 94 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | E-class P450 group I signature | 464 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | E-class P450 group I signature | 474 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | E-class P450 group I signature | 428 | 452 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | Pfam | Cytochrome P450 | 86 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0083 | 530 | SUPERFAMILY | Cytochrome P450 | 38 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag0083 | Cone-Chr15:440678 | Cone16ag0582 | Cone-Chr16:7630865 | 1.27E-110 | dispersed | |
| Cone14ag0083 | Cone-Chr14:420436 | Cone15ag0083 | Cone-Chr15:440678 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0083 | - | - | - | 0.0 |