Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0095 ATGTTTAAGTCATGGAGCAAAAAGAACAAGATCAAAGCTGTCTTCAGTTTACAGTTCCAGGCAACAGAGGTGCCAAAGCTGAAGAAATCGGCTTTGATGATATCTCTGGTGCCAGATGATGTAGGAAAGCCAACGGTGAAACTGGAGAAAGCTGCAATTGAGGATGGCACCTGTGTTTGGCAAAATCCTGTCTATGAAACAGTTAGACTCGTTAGAGAAGCAAAAACAGGAAAGATTAATGAGAAAATCTACCATTTCGTTGTCTCTACTGGATCATCCAAATCTGGTTTCCTTGGAGAAGCTTCCATTGATTTTTCAGACTTCGAGGCAGAAACTGAACCCATAACAGTCTCCCTACCCCTTAAGTTTGCAAACTCCGGTGCAATTTTACACGTGACAATTCAGAGGATAGATGGGGATACTGACCAAAGAGATGGAGAAGCTAATGGAACCCCAACTCTACATAACCATGACAGAAGCTTTAACAGCCAACTGAGCTTTTCCAGTTCAGATGGAAACCATAATTTTGAACAAGGGCACCTAAATAGAAGCTCATCGGACAATGCCGAACAAAACGGAGGATCTACTGCCAGACAAAACTCCATGCCTAAGAAGGGAATGGTAAACGGAAATGCCACAAAAAGTAATGCCCACAGGAGAACAAATACAGATTGGTCACTGGGTTCGGTTTCAGATGGTAGCTTTGCTGACTCGATAAACAGCCCTGAAGACAACCCTTCAAGAGATAGATCCCAAAAGTTTCAGAATGATTCCATTGAGAAACTTAAGAATGAAAATGCTTTGCTAACAAGGCAGGTAGAAGTATCAGAACTAGACTTACAGACTCTACGGAAACAAGTTGCAAAGGAGACAAAACAAGGACAGAATCTATCAAGACAAATTATTAACCTTACAGAGGAGAGAGACGCACTTCGGATAGAATGCAAACAGCTCAAGTTCTTGAAGAAATGCAAAGATGAGGAAGAAGATTCAAAAATGCAGTCCGAGGTTAGGGATGCCAGAAGCCGGTTGGAAGATATGAGGGAGGAGCTTAACCATGAAAAGGAACTAAGAAATGATCTTCAGTTGCAACTGCAGAAAACGCACGAGTCAAACTCTGAGCTGATTCTTGCTGTGAGAGATCTCGAGGAAATGGTTGAGATTAAAAATAAGGTTATAGCAGATCTTTCAAGAGATATGGAGACATGGAAGAATGTTGCAGAAAACCAAGACCATCTTCATGGTGGGGATGACATTAAGGAAGTTGACAGTTTAAAACAAAAGATCACAGACTTAAATGATGAAATGAATACCAACACCAAGCAGCAGGAGGAGCTTGAAATGTATATAAGTCAGCTAGAATTGGACAATGAGCTGTTAAAGAAGGAAAATGATGACATCTCTAAGAAGCTAGAGGAATACAAGATTCATGAGATGATTAACAAAAAAGAATGCTCTAATTCGTTGGCTGTTATAAAAGAACTTGAATCCCAGGTGGAGAGATTAGAAGGAAAAATCAAAAAGCAAGCAGAGGAATTCTCCGAATCGTTGACCTCCATCAATGAACTTGAAAGTCAAGTACAGGGTTTGGAGAAAGAGTTGGAGGAACAAGCACAGGGGTTTGAAAATGATCTTGATGCCGTGAAACATGCTAAAGCTGAACAGGAAGAGAGAGCAATCAGAGCAGAGGAGGCCTTGAGGAATACAAGGTGGAAGAATGCTGTCACCATTGAATGTCTTCAAGATGAATTTAAGAAGCTTTCTGTTGAAATGTCATCCAAGTTTGATGATAATGAGAAGACAACCATGCAAGCAGTTGCAGAAGCCGATGATTTGCGTCTGCAGAAAAGAGTTGTAGAAGAAAAGCTACAAAAGTTCAACGAGAGGCTCGGTCTAATTCAAGATCAGAGTGAAGCAAAAATCCAAGAGCTTTCATACCAATTGAACTCAAAAGCCAAACAAATAGAACAGATGGCAAGGGAGCTTGATTCCAAGTCCAAGCAACTAGAAGATATAGAAAATCATGAAAAGCTTAACTCTGTACCTGATGAAACATCCACATTGGCAGAAAGATGGAACAGTGAAAGGGATAATCTGGAGAAAAAAGTCGATTCTTCAAATAAAGAGGCAGAAAAGGCAAGGCAAGAACTAATCAATATGATATCTTTAAAAGATCAGAAGGATATGGCGATTACTAATCTGCTTTCAGAAGTGGAAGACCTTAGAATCCAATGTAAAGACTTAAAAATGAAGAAAGAAAATTCAAGCAAACAGGGATCTCAATTAAGGGATGATATGCAGAATCAAGAGCATGCAGCTTTACATGAGAGAATAAAATTGTTCGAGGAAGAAATACAGCTGAAGGAGGCTGCTCAGGAAAACACAACAACTTCATTTCTAGCAAAGGAAAAGGAATTACATAATAAGATCAAATTACTCGAAAGGAAAGTAGAAACTTTCTCACACAGGAAAATGGAAATGTCCACTTCCTACACGAGCAGTGAGAACAATAATACTGACCTCCTGACTGAAGTATCTTCTCTGAAGGAAAGGAACAAAGTTATGGAAGGGGAATTGAAAGAAATGGAAGAAAGATATTCAGAAATAAGTCTAAAATTTGCAGAGGTGGAAGGTGAAAGGCAACAGCTTGTAATGACTGTACGTAATCTGAAAAATTGTAGGAAGAACTAG 2691 39.58 MFKSWSKKNKIKAVFSLQFQATEVPKLKKSALMISLVPDDVGKPTVKLEKAAIEDGTCVWQNPVYETVRLVREAKTGKINEKIYHFVVSTGSSKSGFLGEASIDFSDFEAETEPITVSLPLKFANSGAILHVTIQRIDGDTDQRDGEANGTPTLHNHDRSFNSQLSFSSSDGNHNFEQGHLNRSSSDNAEQNGGSTARQNSMPKKGMVNGNATKSNAHRRTNTDWSLGSVSDGSFADSINSPEDNPSRDRSQKFQNDSIEKLKNENALLTRQVEVSELDLQTLRKQVAKETKQGQNLSRQIINLTEERDALRIECKQLKFLKKCKDEEEDSKMQSEVRDARSRLEDMREELNHEKELRNDLQLQLQKTHESNSELILAVRDLEEMVEIKNKVIADLSRDMETWKNVAENQDHLHGGDDIKEVDSLKQKITDLNDEMNTNTKQQEELEMYISQLELDNELLKKENDDISKKLEEYKIHEMINKKECSNSLAVIKELESQVERLEGKIKKQAEEFSESLTSINELESQVQGLEKELEEQAQGFENDLDAVKHAKAEQEERAIRAEEALRNTRWKNAVTIECLQDEFKKLSVEMSSKFDDNEKTTMQAVAEADDLRLQKRVVEEKLQKFNERLGLIQDQSEAKIQELSYQLNSKAKQIEQMARELDSKSKQLEDIENHEKLNSVPDETSTLAERWNSERDNLEKKVDSSNKEAEKARQELINMISLKDQKDMAITNLLSEVEDLRIQCKDLKMKKENSSKQGSQLRDDMQNQEHAALHERIKLFEEEIQLKEAAQENTTTSFLAKEKELHNKIKLLERKVETFSHRKMEMSTSYTSSENNNTDLLTEVSSLKERNKVMEGELKEMEERYSEISLKFAEVEGERQQLVMTVRNLKNCRKN 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 481286 484984 - Conep15aG0009700.1 Cone15ag0095 453223

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0095 896 Coils Coil 330 364 - -
Cone15ag0095 896 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Cone15ag0095 896 Coils Coil 689 716 - -
Cone15ag0095 896 Coils Coil 609 629 - -
Cone15ag0095 896 MobiDBLite consensus disorder prediction 146 242 - -
Cone15ag0095 896 Coils Coil 803 823 - -
Cone15ag0095 896 Coils Coil 422 477 - -
Cone15ag0095 896 Gene3D - 329 477 - -
Cone15ag0095 896 MobiDBLite consensus disorder prediction 671 710 - -
Cone15ag0095 896 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 832 895 - -
Cone15ag0095 896 Coils Coil 485 572 - -
Cone15ag0095 896 Coils Coil 845 879 - -
Cone15ag0095 896 Coils Coil 731 758 - -
Cone15ag0095 896 Coils Coil 641 675 - -
Cone15ag0095 896 MobiDBLite consensus disorder prediction 689 710 - -
Cone15ag0095 896 Coils Coil 252 314 - -
Cone15ag0095 896 MobiDBLite consensus disorder prediction 140 253 - -
Cone15ag0095 896 Coils Coil 379 399 - -
Cone15ag0095 896 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 136 IPR019448 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0095 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0089 Cone-Chr14:443642 Cone15ag0095 Cone-Chr15:481286 0 wgd
Cone15ag0095 Cone-Chr15:481286 Cone6ag0766 Cone-Chr6:3901717 1.66E-100 wgd
Cone15ag0095 Cone-Chr15:481286 Cone8ag0317 Cone-Chr8:1835185 1.27E-108 wgd
Cone15ag0095 Cone-Chr15:481286 Cone9ag0766 Cone-Chr9:3673158 2.10E-82 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g663 Blo06g01120 . . . . . . . . . Cma02g01064 . Car02g00807 . . Cpe05g00655 . . . . . . . . Cla01g00281 Cam01g0291 Cec01g0284 Cco01g0297 Clacu01g0290 Cmu01g0277 Cre09g2230 . . Cone14ag0089 Cone15ag0095 . Csa05g00299 Chy09g01206 . . . . Bda15g00731 . Bpe12g00427 . . . Cmo02g01081 Cmo15g01279 . . . . . Cpe13g00164 Bhi12g00227 . . Lac11g2114 Hepe06g1563 . Lcy12g1671 . . . . . . . . . . Cme09g01743
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007478 1 1 1 0 1 1 4 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 36