Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0138 ATGGATGGGGACGGGCAAGTCGTGCCAGCGGACCCTCAGGCCATGGCGGCCGTGAAAAAGAAGAACCAGTCGTCTAGGAGTTGGATGCTGCTGGATTGTAATGGTGAAGAAACTGTTCTCGATGTCGATAAGTATGCCATCATGCACCGCGTCCAAATCCACGCTCGTGACCTTCGGATCCTCGACCCGTATCTCTCTTACCCGTCCACGATTCTTGGTCGAGAGAAAGCTATTGTTCTTAATTTGGAGCATGTCAAAGCAATCATCACTGCTGAAGAGGTCTTACTTAGAAACCCAATGGATGAATATGTTGTCCCTGTTGTTGAGGAGCTTCGAAGACGATTGCCTCCTGTAAATGCTATCAAATTCCAGACTCAAGGAGATGGCAGGGAGTGCTCAGGTGGGCAAAATGATATCGAAGCTGATGAAGAAGACGAGTCTCCATTTGAATTTAGAGCACTAGAGGTAGCTTTGGAAGCCATTTGTAGTCATCTTGCAGCACGTACAACTGAACTGGAAACTGACGCTTATCCTGCCTTAGAGGAGCTTACATCTCAAATTAGTAGCCGCAACTTGGACAGGGTCCGTAGACTGAAGAGTCAAATGACAAGGTTGACTGCTCGGGTTCAAAAGGTGAGAGACGAGCTTGAGCAGCTACTGGATGATGACGATGATATGGCAGACCTTTACTTGTCAAGAAAACTGGCCAGTGCATCTAGCCCAGTAAGTGAGTCTGGCCCTGCTGCCAATTGGTTTGCTGCCTCACCGACCATAGGTTCAAAGATATCAAGAGCGAGCAGAGCAAGCATGGTGACTGTTCATGGTGATGAGAATGATGTGGAAGAGCTTGAAATGTTACTAGAGGCTTACTTTATGCAAATTGATGGCACATTGAACAAATTAACCACGCTGAGAGAATATATCGATGACACTGAAGATTACATTAATATTCAGCTAGACAATCATCGAAATCAGCTCATTCAGTTGGAGCTGTTTCTAAGCTCAGGAACAGTCTCTGTGTCCATATATTCTTTGGTGGCTGGAATATTCGGGATGAATATTCCGTACACTTGGAATGACAATCATGGATACATGTTCAAATGGGTGGTTTTCTGTACTGGAATGTTTTGTGCACTTCTATTCATCTTCATCATTGCTTATGCTCGCTACAAAGGCTTGGTGGGCTCTTGA 1191 45.51 MDGDGQVVPADPQAMAAVKKKNQSSRSWMLLDCNGEETVLDVDKYAIMHRVQIHARDLRILDPYLSYPSTILGREKAIVLNLEHVKAIITAEEVLLRNPMDEYVVPVVEELRRRLPPVNAIKFQTQGDGRECSGGQNDIEADEEDESPFEFRALEVALEAICSHLAARTTELETDAYPALEELTSQISSRNLDRVRRLKSQMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLASASSPVSESGPAANWFAASPTIGSKISRASRASMVTVHGDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVSVSIYSLVAGIFGMNIPYTWNDNHGYMFKWVVFCTGMFCALLFIFIIAYARYKGLVGS 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 647124 649420 + Conep15aG0014000.1 Cone15ag0138 453266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0138 396 Coils Coil 195 222 - -
Cone15ag0138 396 FunFam Magnesium transporter MRS2-1 16 99 - -
Cone15ag0138 396 Pfam Magnesium transporter MRS2-like 39 236 - -
Cone15ag0138 396 CDD Mrs2_Mfm1p-like 28 393 IPR039204 -
Cone15ag0138 396 MobiDBLite consensus disorder prediction 125 144 - -
Cone15ag0138 396 Pfam CorA-like Mg2+ transporter protein 284 384 IPR002523 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone15ag0138 396 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 332 384 IPR045863 -
Cone15ag0138 396 Gene3D - 13 99 - -
Cone15ag0138 396 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 393 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cone15ag0138 396 Gene3D Magnesium transport protein CorA, transmembrane region 128 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0893 Cone-Chr10:4625335 Cone15ag0138 Cone-Chr15:647124 9.12E-108 dispersed
Cone15ag0138 Cone-Chr15:647124 Cone7ag1020 Cone-Chr7:7874808 7.90E-166 dispersed
Cone14ag0131 Cone-Chr14:606039 Cone15ag0138 Cone-Chr15:647124 3.42E-202 wgd
Cone15ag0138 Cone-Chr15:647124 Cone4ag0290 Cone-Chr4:1342275 2.21E-41 wgd
Cone15ag0138 Cone-Chr15:647124 Cone7ag0295 Cone-Chr7:1272309 6.16E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0138 K16075 - vvi:100244262 603.979