Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0144 ATGCTATCTGGACTCAAGTTCATACCCCGTGAAAAGATTACTGATGCTCCAGATAACTCGAAAGCTTTTAGAAAGAAGAGTAAGAAATCAAGCAGTAAAGAGGAGAATAGACACACGAGGCAGAAGAGTACTACTGATAATAGTAGCTCTGATGAGGAAAATCTTGGCAAAATAGAGGGGAGGAGTAGAAGAAAGCGGTGGTACTCATCAGATGAGCATTCATCCTCGTATTCATTTGAAAATGAGAGTGAAGAAAGTTCTGACCAGGATGATAAGTATCGCCATGGTAGGAAGAGGAGATCTAAAGGTGGTAGAAAGAAATCATCAAAAGAATATTCTTCTTCGTCTGACAGTGAAGAAGGTGGTAGCCGTAACAGTAGAAATAAAAGGCATAAAAGAAAAAGTAAGGAAGAAGGAACGAGACGGAAGAATGAAGGAGGCAATCAAAAGGACATTGTAGGAAATGATTCCCAAAGTGATCATGAAATTGTAAGAAAAGAAATGGGATTAGAGTGGATGCTTAGACCTGAAGAGAGGAGAGATAAAAAGTCCGAAGTGGCTGAAAACATTGAGAAGGAGGAAGCTCCCGCCAGTGAGATAATTAAAGTGAATCCCAGGGAATTAAATCCGTATTTGAAAGATAATGGAAGTGGTTATCCAGAAGATACAGATCAGGGTGCTAGATCTAGTAAAGAACAACTTCCATCTTCTTCTGTTGTTGGAGATGGAGGAGCGAGTTGGAGGCTTAAAGCTTTGAAGCGTGCTCAAGAGCAAGCTGCTCGAGAAGGAAGGAAGCTAGATGAGGTTGTTGAAGAGCGGTGGGGTTCACTTGGTCAATTAGCTGTCTCTACAGCATCTCATAGAGCTGCCCCATCCCGTGCGCATTTGCATGCCATAAAAAGTAGAAAGAGAGGGCTAAATGAGGAGACTCAAGTTGGGTCAGACAATCAAACTGCAAATGATACAGAAAAGATATCTAGCAGGGATTACTTGAAGAATGTGTCATCAAGGCACCCTGAAATGAGGGAGCCAAAAGTTCAGGGTTCTTTATCTTGGGGAAAGCAAAAAAGTCGAGATATGTCTTCTAAAGATTCTGGAATTATCTCCGCTGCAGCGTCTAGCTTGAATAAGTTTGATAATGATGGAAGTTTTATGGGTAAACTTACTGGTAGCCAGAGTAAGGATTCTACTAATCCAGTACTGGAAAGCATGGAGTCAAATTTGATCTTGTCGGAAACTAAGAATTCGAATGAAGGTGGTCCTGTGCCCAAGCATGCAATGAGTGCTAACCAGCTTGCAGCCAAAGCTCTCCAGCTTAAAATGAAAGGAAAGCATGAAGAAGCTGAGAAACTTTTGAAAGAAGTGGAAAATATGAAGGTGAGACATGGTGATAAAGGTAATTCAAGCCGGCCAGAAAATGTACCAAGGACAAGCAGACACATTTTTCCAGATGCTTCTCTTAGAAGAAAGAAAGAGGATGATGATGGGGATAAGCATCTAGCACAAAACATAATGCAGAATAAAAGGTTTAGTATATCAGGCCGAGCTGATGATGAGTATGACTATGAAGATGGTCCAAGCAGAAAGTCACAGAAAAACAGGGTAAAAGGTGATGACCAAAAGGCCAACATGAAGATACGAACTCAACAAGAAAGATGCATCTTTTGCTTTGAGAATCCCAACAGCCCAAAACATCTTATAGTGTCCATAGCAACATCCACATATTTGATGCTGCCTCAACAACAGCCTGTGGTCCCTGGTCATTGCTGCATTTTACCCATGCAGCATGAATCAGCTACCAGAAGTGTTGACAAAATTGTATGGGAGGAAATAAGGAACTTCAAGAAATGCCTTATTATGATGTTTGCGAAGCAAGACAAGGAAATGGTATTTCTCGAAACGGTTATGGGCTTGGCCCAACAACGTCGCCATTGTCTGATTGAGTGTATTCCACTTCCTCGAGAAAAAGCCAAACAGGCTCCTCTATATTTCAAAAAGGCCATTGATGAAGCAGAAGATGAATGGAGCCAGCACAATGCAAAGAGGCTGATCAATACAAGCAGAAAGGGGCTCTGTGGATCAATTCCCGAAAACTTTCCATACTTCCACGTCGAATTCGGTCTAAATGAAGGGTTTGTTCATGTGATCGATGATGAGAAAGAATTCAAAAGCAGCCTAGGGCTCAATGTCATAAGAGGTATCCTACGTTTGGCCGAAGAAGACATGTATCGTAGAAGGCGACATGAATCACTGGAGGTTCAGAAGCAAGCCGTTGCGAGCTTTGTCCGAGATTGGGAACCTTTCGATTGGACAAAACAGATTCCAAGTGACTCATAG 2337 41.89 MLSGLKFIPREKITDAPDNSKAFRKKSKKSSSKEENRHTRQKSTTDNSSSDEENLGKIEGRSRRKRWYSSDEHSSSYSFENESEESSDQDDKYRHGRKRRSKGGRKKSSKEYSSSSDSEEGGSRNSRNKRHKRKSKEEGTRRKNEGGNQKDIVGNDSQSDHEIVRKEMGLEWMLRPEERRDKKSEVAENIEKEEAPASEIIKVNPRELNPYLKDNGSGYPEDTDQGARSSKEQLPSSSVVGDGGASWRLKALKRAQEQAAREGRKLDEVVEERWGSLGQLAVSTASHRAAPSRAHLHAIKSRKRGLNEETQVGSDNQTANDTEKISSRDYLKNVSSRHPEMREPKVQGSLSWGKQKSRDMSSKDSGIISAAASSLNKFDNDGSFMGKLTGSQSKDSTNPVLESMESNLILSETKNSNEGGPVPKHAMSANQLAAKALQLKMKGKHEEAEKLLKEVENMKVRHGDKGNSSRPENVPRTSRHIFPDASLRRKKEDDDGDKHLAQNIMQNKRFSISGRADDEYDYEDGPSRKSQKNRVKGDDQKANMKIRTQQERCIFCFENPNSPKHLIVSIATSTYLMLPQQQPVVPGHCCILPMQHESATRSVDKIVWEEIRNFKKCLIMMFAKQDKEMVFLETVMGLAQQRRHCLIECIPLPREKAKQAPLYFKKAIDEAEDEWSQHNAKRLINTSRKGLCGSIPENFPYFHVEFGLNEGFVHVIDDEKEFKSSLGLNVIRGILRLAEEDMYRRRRHESLEVQKQAVASFVRDWEPFDWTKQIPSDS 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 678126 682021 + Conep15aG0014700.1 Cone15ag0144 453272

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0144 778 MobiDBLite consensus disorder prediction 138 200 - -
Cone15ag0144 778 Coils Coil 434 465 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 325 344 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 454 540 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 454 469 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 304 362 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 482 502 - -
Cone15ag0144 778 Pfam Protein similar to CwfJ C-terminus 1 542 665 IPR006768 -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 1 246 - -
Cone15ag0144 778 Coils Coil 252 272 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 310 324 - -
Cone15ag0144 778 MobiDBLite consensus disorder prediction 512 540 - -
Cone15ag0144 778 Pfam Protein similar to CwfJ C-terminus 2 674 771 IPR006767 -
Cone15ag0144 778 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 125 771 IPR040194 GO:0000398(PANTHER)|GO:0071014(PANTHER)
Cone15ag0144 778 MobiDBLite consensus disorder prediction 11 71 - -
Cone15ag0144 778 SUPERFAMILY HIT-like 547 675 IPR036265 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0144 K24940 - - cit:102622499 909.442
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g627 Blo01g00097 . . Bda08g00268 . . . Bma05g01076 . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0144 . . . . . . . . . . Bpe05g00866 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006081 1 2 1 1 1 1 1 1 1 2 1 1 2 2 2 1 0 1 0 0 1 2 2 1 2 1 2 1 4 1 39