Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0149 | ATGGTAAATCTGAACGAATTGGAGCAGGAAATTATGAAGGTTCAGTTTAATCAGAATGAGGAAATCCAGAAAGTGTATAAGCAGAGATTGGTATGGCAGAAGCAAGATGTGATTCATCTCAAGGAAATCTCACTCTGGAATCTGACCTATGATAAGATTGTCGAGCTTTTAGCAAGAACTGTCTGTACTGTTTATGCTAGAATTTCCCTGGCAGTTGGAAACTCTGCTCCGAAAGATGAAGACGATGATCATATTGATCAATCCAGTCATGTTTCTGGTCATTCTACCGCAGGAAAGCCGACTAATTCCGGTTCACCTTCCACTGTAGGAGGATGTGCCTTAGCCTTACATTATGCAAATATCATCATTGTCATAGAGAAGTTGCTTTGGGATCCTCAACTAGTTGGAGTGGAGGCTAGAGATGAGTTGTACCAAATGTTGCCTACAAGCTTGAGAATATCTCTCAAGTCTAATTTGAAGTCTTATATGCAGAATTTGGCTATATATGATGCACTGCTTGCCCGTGAATGGAATGATAAGCTCAATGGGATATTGAGATGGCTCGGCCCTATGGCTTATAACACAATCCGGTGGCAATACGAATGTAGTTTCGAGCAACATCAGGTTGTTTCACGAACCAATGTTGTTCTGCTTCAGACTCTTCATTTTGCTGATAAAGAGAGGACAGAGGCTGCAATATGTCAACTCCTTGTCGGGTTGACTTATATTTTCCGTCTGGCTAATCCTTGGTGGGCAGGGCAGGTGGGGCTGCCGGCCGGTCTCAATCTGGCAACCAATCATTCACCCGTCTTAAAACAGCCCAACCGCTACGACCTATCCATAACCGCAAGTAGCGGTGCAAGAAGTACTGGAAGTACTAGAGATGACGATGAAGATGGAGATAATGGATCGGACGAGCCAAAAGAAGGAGCTGTTGAGGTCGGAACCCGCCGGCCCAGAGGCCGGCCCCCTGGATCCAAAAACAGGCCCAAGCCCCCCATTTTCGTAACCCGAGACAGTCCGAACGCGCTTCGGAGCCATGTCATGGAGATTTCTGGAGGTGCTGACGTGGCAGATAGCGTGGCTCAGTTCGCTCGGAGGCGTCAGAGAGGAGTTTGTATTCTAAGTGGGAGCGGCTCGGTTGCTAATGTAACCCTAAGACAGCCTGCTGCGCCTGGAGCTGTAGTTGCACTCCGTGGAAGGTTTGAAATTCTCTCCTTGACCGGAGCATTCTTGCCAGGACCGGCCCCTCCTGGCTCGACTGGGCTAACTGTTTATCTAGCTGGAGCTCAGGGGGAGGTTGTGGGTGGGAGTGTTGTCGGATCGTTAGTTGCAGCTGGGCCAGTGATGATAATTGCTGCAACTTTTGCTAATGCTACATATGAGAGGTTGCCTCTTGAAGATGATGATCATGATCAGGCCGGGGCAGGGGGCAGTCCCGGGCATGGCGATGCTGGCAGCTCTCCGCCTGCAATTGGGCCAGCACATAGCGGGCTGATGCAGCATGGGCTTCCGGCTGATCCTGCCACGGCGGCTGTGGCTTACAACCTGCCTCCAAATTTGCTTCCTAATGGAGGAAACTTAGGGCATGATCCATATACTTGGGCTCATGGTCGTCCACCTTACTGA | 1629 | 49.36 | MVNLNELEQEIMKVQFNQNEEIQKVYKQRLVWQKQDVIHLKEISLWNLTYDKIVELLARTVCTVYARISLAVGNSAPKDEDDDHIDQSSHVSGHSTAGKPTNSGSPSTVGGCALALHYANIIIVIEKLLWDPQLVGVEARDELYQMLPTSLRISLKSNLKSYMQNLAIYDALLAREWNDKLNGILRWLGPMAYNTIRWQYECSFEQHQVVSRTNVVLLQTLHFADKERTEAAICQLLVGLTYIFRLANPWWAGQVGLPAGLNLATNHSPVLKQPNRYDLSITASSGARSTGSTRDDDEDGDNGSDEPKEGAVEVGTRRPRGRPPGSKNRPKPPIFVTRDSPNALRSHVMEISGGADVADSVAQFARRRQRGVCILSGSGSVANVTLRQPAAPGAVVALRGRFEILSLTGAFLPGPAPPGSTGLTVYLAGAQGEVVGGSVVGSLVAAGPVMIIAATFANATYERLPLEDDDHDQAGAGGSPGHGDAGSSPPAIGPAHSGLMQHGLPADPATAAVAYNLPPNLLPNGGNLGHDPYTWAHGRPPY | 542 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 720428 | 723830 | - | Conep15aG0015300.1 | Cone15ag0149 | 453277 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0149 | 542 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 345 | 457 | IPR005175 | - | |
Cone15ag0149 | 542 | Pfam | Protein of unknown function (DUF668) | 108 | 197 | IPR007700 | GO:0045927(InterPro) | |
Cone15ag0149 | 542 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 342 | 470 | - | - | |
Cone15ag0149 | 542 | ProSiteProfiles | PPC domain profile profile. | 341 | 477 | IPR005175 | - | |
Cone15ag0149 | 542 | CDD | DUF296 | 345 | 431 | IPR005175 | - | |
Cone15ag0149 | 542 | FunFam | AT-hook motif nuclear-localized protein | 344 | 471 | - | - | |
Cone15ag0149 | 542 | Gene3D | - | 344 | 473 | - | - | |
Cone15ag0149 | 542 | MobiDBLite | consensus disorder prediction | 281 | 341 | - | - | |
Cone15ag0149 | 542 | Coils | Coil | 4 | 24 | - | - | |
Cone15ag0149 | 542 | MobiDBLite | consensus disorder prediction | 75 | 105 | - | - | |
Cone15ag0149 | 542 | MobiDBLite | consensus disorder prediction | 90 | 105 | - | - | |
Cone15ag0149 | 542 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 295 | 542 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone15ag0149 | 542 | MobiDBLite | consensus disorder prediction | 468 | 503 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0149 | Cone-Chr15:720428 | Cone3ag0681 | Cone-Chr3:3469813 | 1.61E-116 | dispersed | |
Cone7ag0906 | Cone-Chr7:7121216 | Cone15ag0149 | Cone-Chr15:720428 | 1.23E-14 | dispersed | |
Cone1ag1106 | Cone-Chr1:55494713 | Cone15ag0149 | Cone-Chr15:720428 | 3.09E-51 | wgd | |
Cone14ag0141 | Cone-Chr14:683830 | Cone15ag0149 | Cone-Chr15:720428 | 1.54E-187 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone15ag0333 | Cone-Chr15:1527904 | 1.34E-17 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone18ag1132 | Cone-Chr18:8173667 | 1.07E-75 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone4ag0307 | Cone-Chr4:1405303 | 1.96E-80 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone5ag0814 | Cone-Chr5:3498489 | 1.04E-49 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone6ag0720 | Cone-Chr6:3625087 | 2.71E-21 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone7ag0306 | Cone-Chr7:1330720 | 4.86E-29 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone8ag0353 | Cone-Chr8:2019529 | 2.91E-76 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone9ag0724 | Cone-Chr9:3455326 | 4.95E-21 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0149 | - | - | - | 0.0 |