Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0156 ATGGATGAAGATCAGCATGGAGGAAAGGGCAAGGAAGAGAATGAAGGTGGAGAGCTAAGGTATCGAGGAGTTAGGAGGCGGCCATGGGGAAAGTTTGCGGCAGAGATTCGAGATTCAACTAGGAACGGGGCTCGCGTGTGGCTCGGTACGTTCAATACGGCCGAGGAAGCGGCTCGAGCATATGACAGGGCCGCTTATGCAATGAGGGGTCAGTTAGCCATTCTAAATTTCCCTCACGAACATTTTCCTTCACCAAGCGTTGGTGACTCTTCTTCCGCCGCCTCGGCTTCAACGTCTTCTCCCTCGGCTGGAAATAGGTCCTCTGGACAGGAAGTATTCGAGTTCGAGTACTTGGATGACAAAGTGCTGGAAGAGCTGCTTGAATATGGAGAGAGAAAGGGCAAGAAATAG 411 51.58 MDEDQHGGKGKEENEGGELRYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFNTAEEAARAYDRAAYAMRGQLAILNFPHEHFPSPSVGDSSSAASASTSSPSAGNRSSGQEVFEFEYLDDKVLEELLEYGERKGKK 136
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 745558 745968 + Conep15aG0016000.1 Cone15ag0156 453284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0156 136 MobiDBLite consensus disorder prediction 1 21 - -
Cone15ag0156 136 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 PANTHER DNA-BINDING DOMAIN 13 102 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Cone15ag0156 136 Pfam AP2 domain 20 70 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 MobiDBLite consensus disorder prediction 78 111 - -
Cone15ag0156 136 SMART rav1_2 20 84 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 MobiDBLite consensus disorder prediction 85 109 - -
Cone15ag0156 136 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Cone15ag0156 136 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 CDD AP2 20 79 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0156 136 SUPERFAMILY DNA-binding domain 20 80 IPR016177 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0156 Cone-Chr15:745558 Cone7ag0318 Cone-Chr7:1377456 4.81E-39 dispersed
Cone15ag0156 Cone-Chr15:745558 Cone15ag0157 Cone-Chr15:750525 2.95E-29 tandem
Cone14ag0147 Cone-Chr14:709723 Cone15ag0156 Cone-Chr15:745558 9.50E-29 wgd
Cone15ag0156 Cone-Chr15:745558 Cone4ag0322 Cone-Chr4:1457242 3.75E-46 wgd
Cone15ag0156 Cone-Chr15:745558 Cone7ag0317 Cone-Chr7:1375445 1.74E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44819 PF00069 Pkinase 1.30E-70 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0156 - - - 0.0