Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0156 | ATGGATGAAGATCAGCATGGAGGAAAGGGCAAGGAAGAGAATGAAGGTGGAGAGCTAAGGTATCGAGGAGTTAGGAGGCGGCCATGGGGAAAGTTTGCGGCAGAGATTCGAGATTCAACTAGGAACGGGGCTCGCGTGTGGCTCGGTACGTTCAATACGGCCGAGGAAGCGGCTCGAGCATATGACAGGGCCGCTTATGCAATGAGGGGTCAGTTAGCCATTCTAAATTTCCCTCACGAACATTTTCCTTCACCAAGCGTTGGTGACTCTTCTTCCGCCGCCTCGGCTTCAACGTCTTCTCCCTCGGCTGGAAATAGGTCCTCTGGACAGGAAGTATTCGAGTTCGAGTACTTGGATGACAAAGTGCTGGAAGAGCTGCTTGAATATGGAGAGAGAAAGGGCAAGAAATAG | 411 | 51.58 | MDEDQHGGKGKEENEGGELRYRGVRRRPWGKFAAEIRDSTRNGARVWLGTFNTAEEAARAYDRAAYAMRGQLAILNFPHEHFPSPSVGDSSSAASASTSSPSAGNRSSGQEVFEFEYLDDKVLEELLEYGERKGKK | 136 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 745558 | 745968 | + | Conep15aG0016000.1 | Cone15ag0156 | 453284 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0156 | 136 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cone15ag0156 | 136 | PRINTS | Ethylene responsive element binding protein signature | 21 | 32 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | PRINTS | Ethylene responsive element binding protein signature | 44 | 60 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | PANTHER | DNA-BINDING DOMAIN | 13 | 102 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Cone15ag0156 | 136 | Pfam | AP2 domain | 20 | 70 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | MobiDBLite | consensus disorder prediction | 78 | 111 | - | - | |
Cone15ag0156 | 136 | SMART | rav1_2 | 20 | 84 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | MobiDBLite | consensus disorder prediction | 85 | 109 | - | - | |
Cone15ag0156 | 136 | FunFam | Ethylene-responsive transcription factor 2 | 20 | 79 | - | - | |
Cone15ag0156 | 136 | ProSiteProfiles | AP2/ERF domain profile. | 20 | 78 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | CDD | AP2 | 20 | 79 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | Gene3D | AP2/ERF domain | 20 | 79 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone15ag0156 | 136 | SUPERFAMILY | DNA-binding domain | 20 | 80 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0156 | Cone-Chr15:745558 | Cone7ag0318 | Cone-Chr7:1377456 | 4.81E-39 | dispersed | |
Cone15ag0156 | Cone-Chr15:745558 | Cone15ag0157 | Cone-Chr15:750525 | 2.95E-29 | tandem | |
Cone14ag0147 | Cone-Chr14:709723 | Cone15ag0156 | Cone-Chr15:745558 | 9.50E-29 | wgd | |
Cone15ag0156 | Cone-Chr15:745558 | Cone4ag0322 | Cone-Chr4:1457242 | 3.75E-46 | wgd | |
Cone15ag0156 | Cone-Chr15:745558 | Cone7ag0317 | Cone-Chr7:1375445 | 1.74E-39 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44819 | PF00069 | Pkinase | 1.30E-70 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0156 | - | - | - | 0.0 |