Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0157 ATGGATGATCACTCAATCTTCCAATGCTCTCCTATTTCCGATTTCTCATCGGAATCTTCCTTCGGCTCGCCGGAATACTCTTTCTCATGGGACGGTCCTATATTTTCCAATAATCATCATAATTCGATGAATTCGCTCCCACTCCCGTTCAATGAAAATGACTCGGAGGAAATGTTCCTCTACGGCCTCCTATCCAAATTATCCCCACCAGAACAAGAATCAACAACCAGTCCAATCAAGGAAGAAGAGGTTGACTCCATTTCCGAAGAAAATCCGAAAAGCGAAAAAGCATATAGAGGCGTCAGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATAAGGGATTCGACGAGAAATGGCCGGAGAGTTTGGTTAGGAACATTTGACAGCCCTGAAGCAGCGGCTTTGGCTTATGATCAGGCGGCGTTTTCGATGAGAGGTTCGACGGCAATTCTCAATTTTCCGGCAGAGAGAGTAAGGGAGTCGTTGAGGGAAATGAATTGCGGTTCTTCTTCCGACGGGAAGGAGAATGGGAATGGTTCGCCTGTGTTGGCTTTGAAAAGAAAGCATTCCATGAGAAGAAAAGTAGTAAGGAAGAAGACTAATAGTAGCAACAATAGCGATGTGAAGAAAGAAAACATTGTCTTTTTGGAAGATTTAGGTGCGGATTATTTGGAAGACTAG 684 45.47 MDDHSIFQCSPISDFSSESSFGSPEYSFSWDGPIFSNNHHNSMNSLPLPFNENDSEEMFLYGLLSKLSPPEQESTTSPIKEEEVDSISEENPKSEKAYRGVRRRPWGKFAAEIRDSTRNGRRVWLGTFDSPEAAALAYDQAAFSMRGSTAILNFPAERVRESLREMNCGSSSDGKENGNGSPVLALKRKHSMRRKVVRKKTNSSNNSDVKKENIVFLEDLGADYLED 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 750525 751219 + Conep15aG0016100.1 Cone15ag0157 453285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0157 227 Gene3D AP2/ERF domain 96 156 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 FunFam Ethylene-responsive transcription factor 2 96 157 - -
Cone15ag0157 227 Pfam AP2 domain 97 148 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 PRINTS Ethylene responsive element binding protein signature 137 157 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 PANTHER DNA-BINDING DOMAIN 68 205 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Cone15ag0157 227 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 CDD AP2 98 156 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 SMART rav1_2 97 161 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone15ag0157 227 MobiDBLite consensus disorder prediction 67 99 - -
Cone15ag0157 227 SUPERFAMILY DNA-binding domain 97 156 IPR016177 GO:0003677(InterPro)
Cone15ag0157 227 MobiDBLite consensus disorder prediction 76 99 - -
Cone15ag0157 227 MobiDBLite consensus disorder prediction 9 25 - -
Cone15ag0157 227 MobiDBLite consensus disorder prediction 167 208 - -
Cone15ag0157 227 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0147 Cone-Chr14:709723 Cone15ag0157 Cone-Chr15:750525 1.36E-98 dispersed
Cone15ag0157 Cone-Chr15:750525 Cone4ag0324 Cone-Chr4:1464822 1.68E-69 dispersed
Cone15ag0156 Cone-Chr15:745558 Cone15ag0157 Cone-Chr15:750525 2.95E-29 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44820 PF00069 Pkinase 1.30E-70 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0157 K14516 - csv:101210326 247.284