Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0159 ATGTTCGGTGCTGTTCCGCCCATTCTAACTTACTACTGGCGTATGAAAATGCTAGAAACTGCTCGTTACACTACTCTTCTAGCCAAGAACGCTAAACAAGCGGCAACTGACATGTCTAGGGTCTTACAAGTCGAACTCGAAGACGAACAAGAGAAACTAGACCAAAAAAGCCAAAGCACCAATTCTCAGAACCTCTTCCAAAAGGATATCTTCATCGCGATTGGTTGGCTTCCAGCCGCAGCAACAATGAGTCCACTCGAGGAATGTTACAAAATCGCCAGAGTACAGAGGCTCATTGCACTATGCGGAATCGTGCCGGGGTATTGGTTTAATGTCGCGTTGATTGATTATGCTGGACAGTTCCGGATCCAACTGATGGGATTTATCGTGATGACAATATTCATGTTTGCTCTTGCCATACCTAACCATCATTGGACTCTAAAGGATCACCGGATCGGTTTTAATATAATGTACTCACTTACTTTCTTCTTTTCGAATTTCGGACCGAACACAGCAACATACATCGTACCGGCCGAGAATTTCCCGGCAAGGCTAAGGTCAACTAGTCATGGAATATCAGCTGCGGCTGAAAGGGCTGGAGCTATTGTGGGTGCGTTTGGGATCTTATATGCATCTCAGAGCAAAGATCAGGCAAAAATGGATCCAGGTTATCATACACGGGCATAG 687 45.27 MFGAVPPILTYYWRMKMLETARYTTLLAKNAKQAATDMSRVLQVELEDEQEKLDQKSQSTNSQNLFQKDIFIAIGWLPAAATMSPLEECYKIARVQRLIALCGIVPGYWFNVALIDYAGQFRIQLMGFIVMTIFMFALAIPNHHWTLKDHRIGFNIMYSLTFFFSNFGPNTATYIVPAENFPARLRSTSHGISAAAERAGAIVGAFGILYASQSKDQAKMDPGYHTRA 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 769569 770347 + Conep15aG0016300.1 Cone15ag0159 453287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0159 228 Gene3D MFS general substrate transporter like domains 1 221 IPR036259 -
Cone15ag0159 228 Coils Coil 39 59 - -
Cone15ag0159 228 Pfam Sugar (and other) transporter 112 214 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone15ag0159 228 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 211 - -
Cone15ag0159 228 SUPERFAMILY MFS general substrate transporter 4 213 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0159 Cone-Chr15:769569 Cone4ag0327 Cone-Chr4:1490387 1.94E-101 dispersed
Cone15ag0159 Cone-Chr15:769569 Cone15ag0160 Cone-Chr15:773131 6.52E-114 tandem
Cone14ag0148 Cone-Chr14:726930 Cone15ag0159 Cone-Chr15:769569 1.52E-110 wgd
Cone15ag0159 Cone-Chr15:769569 Cone17ag0612 Cone-Chr17:3378888 5.07E-91 wgd
Cone15ag0159 Cone-Chr15:769569 Cone20ag0800 Cone-Chr20:5678006 5.86E-64 wgd
Cone15ag0159 Cone-Chr15:769569 Cone4ag0326 Cone-Chr4:1480205 1.18E-106 wgd
Cone15ag0159 Cone-Chr15:769569 Cone7ag0321 Cone-Chr7:1397719 1.94E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0159 K08176 - vvi:100257925 317.005