Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0172 ATGGCTCCTACGCCTTCTTCCAAATCGAATCAGGGCCATAACCATTCTACCCATATGAAAACACCTCAACCGAAGCGACTCCATTTCAACCCCACAAAGGGAAACCCATCTCCACATCCCACTTCCGCCATTAAAGATGCCCAAACAGAGCACCCTGTTGAAGTCATTGGCCGGATCCGAAACTTTCCGGACAGAAAAGACAAACCCATTTCAGTTCTTCAGATTGACCCTGATAAAAACAGCATCCGGATTCGGGCCGATTTTGGATACCATGATTTTAGCCTAGATGGGATTTCTTTATCAGAAGAAGAGGATCTTGATACGTTTTACAAGAAGTTCGTACAGTCGAGAATTAGTGGGGTTAAATCCGGCGATAAGTGTACCATTATGATGTATGGGCCCACTGGAGCAGGAAAAAGTCACACTATGTTTGGCTGTTCAAAGCAGCCTGGAATTGTGTATAAATCTTTGAGGGATATTTTGGGAGATGGAGATGAAGAAGTTGACGAGGGTGTTAGTTCTGGAATGTTTGTTCAAGTTACGGTTTTGGAGATTTACAATGAAGAGCTTTACGATCTTCTTTCTAATACTGGTGGTGGATGGCCTAAAGGAACTGGTTATAAGGTGAAGCTTGAAGTAATGGGGAAGAAAGCTAAAAATGCAACCTATATATCTGGAAATGAAGCCAGAAAGATTTCTAAAGAAATTCAGAAGGTGGAAAAGAGAAGAATCGTTAAGAGCACTCTCTGTAATGATCGAAGCTCTCGGAGCCATTGCATGATAATTCTTGATGTACCGACTGTAGGAGGTCGCCTAATGCTTGTCGATATGGCCGGTTCTGAAAATATCGAGCAGGCTGGTCAAGTTGGGTTCGAGGCAAAATTGCAGACAGCAAAGATCAATCAAGGAAACACAGCACTAAAAAGAGTAGTTGAATCCATTGCAAATGGTGACTCTCATGTACCCTTTAGAGACAGCAAATTGACAATGCTTCTTCAGGATTCTTTTGAGGATGACAAGTCAAAGATCTTGATGATCTTATGTGCTAGTCCTGATCCTAAGGAGATACACAAAACGATCTCCACCCTTGAATATGGATCGAAAGCAAAATGCATTGTCCGTGGCCTGCTGACTCCAGTCAAGGATAAGAATGGTGCTGAAGATTCTTCCTCAACAGTTATTCTAGGATCAAGACTTGCAGCCATGGATGAATTCATCTTCAAGCTACAAAGAGAGAACAAGATCCGAGAAAAAGAGCGTAATGAAGCGCATAATGAGCTGAGGAAGAAAGAAGAAGAGGTGGCTGCACTAAGAGCAAGGTTTGAGCTCATAGAAGTGAAGAAAAAGACAGGCAAAGATGTAGAAGAAATCAACTTAGAAGTGAACAAACGGACCCAGATGCTAAAACTTGAGCTGGAAAAGAAGCTGGAAGAGTGTCAGAGAATGGCCAATGAGTTTGTAGAATTGGAGAGGAAGAGAATGGAAGAAAAGATCTTACAGCAGCAAGAAGAAGTTGAAATGCTTAGACGCCGTTTGGAAGAGATCGAATTCGAGCTGAGAAACTCGAAGGACCGAAATGGAGAAGGAAGAGGGTCGATTGATTTTGAAGGAGGCAGGATTGCTAAAAGGCTGCTCGGGTTATATTCCAGTGAGGATGATGGAGCCATGGTGAAATCTATGGACTTGGACATGGACGATCAAGATCATCATCAGCCTATACATGAAGTGAAACAGATGGGTAGTAGTAACCAAGGCTTGTTAGATGAAGTAAGCGAAATTGTAGTAAATCATCAAAATGTTTTCGCTTCGAAATTCGGCGATAGAGTTTGTTTGAGTACTGTTTTTGAGGAAGAAGAGATGGAAGAAGAAGAAGAGAAAGAAATAGTCAAGGAAATGTGCACAATTGATGAGTCCTCACGGAATTTAGTCAAGCAGGAAATTTTCAAGGAAAGATCAATAGATGAAGAAGAAGAAGATTCCAAGGAGGCAGGTTTTTCTTCTAGAAGAATGAGGATTCAGAACATATTTACACTATGTGGGAACAATAGAGAATTGGGTCAACAAATCAGAACATCATTAGCTGCTCGAACAAGGTCCGAAGAAGAAGAAGAAACAGGATTTGATCATCTTCTTGTTCAATCATCTCCGTTGAAGACAATTGGAGAGGTTCAAGAATGCAAGGATCAGTTCAAGCCAGCTTTTAAACAGAATTACAGTCCCTTAAGCTCACTGGAGAATCAGCTGATGCTGCCTCTCCCCCCTTGCATTGCCAAGAAAATTGATGTTCTATCTCCCAAGATGAAGGAAAACTTAAGAAGATGTGCAAGATAA 2331 41.61 MAPTPSSKSNQGHNHSTHMKTPQPKRLHFNPTKGNPSPHPTSAIKDAQTEHPVEVIGRIRNFPDRKDKPISVLQIDPDKNSIRIRADFGYHDFSLDGISLSEEEDLDTFYKKFVQSRISGVKSGDKCTIMMYGPTGAGKSHTMFGCSKQPGIVYKSLRDILGDGDEEVDEGVSSGMFVQVTVLEIYNEELYDLLSNTGGGWPKGTGYKVKLEVMGKKAKNATYISGNEARKISKEIQKVEKRRIVKSTLCNDRSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQVGFEAKLQTAKINQGNTALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGSKAKCIVRGLLTPVKDKNGAEDSSSTVILGSRLAAMDEFIFKLQRENKIREKERNEAHNELRKKEEEVAALRARFELIEVKKKTGKDVEEINLEVNKRTQMLKLELEKKLEECQRMANEFVELERKRMEEKILQQQEEVEMLRRRLEEIEFELRNSKDRNGEGRGSIDFEGGRIAKRLLGLYSSEDDGAMVKSMDLDMDDQDHHQPIHEVKQMGSSNQGLLDEVSEIVVNHQNVFASKFGDRVCLSTVFEEEEMEEEEEKEIVKEMCTIDESSRNLVKQEIFKERSIDEEEEDSKEAGFSSRRMRIQNIFTLCGNNRELGQQIRTSLAARTRSEEEEETGFDHLLVQSSPLKTIGEVQECKDQFKPAFKQNYSPLSSLENQLMLPLPPCIAKKIDVLSPKMKENLRRCAR 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 827359 830411 - Conep15aG0017600.1 Cone15ag0172 453300

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0172 776 Coils Coil 462 525 - -
Cone15ag0172 776 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 35 376 - -
Cone15ag0172 776 SMART kinesin_4 50 380 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 PANTHER KINESIN-RELATED 53 688 IPR027640 GO:0003777(PANTHER)|GO:0003777(InterPro)|GO:0005871(PANTHER)|GO:0005874(PANTHER)|GO:0007018(InterPro)|GO:0007018(PANTHER)|GO:0008017(PANTHER)|GO:0016887(PANTHER)
Cone15ag0172 776 Pfam Kinesin motor domain 78 372 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 PRINTS Kinesin heavy chain signature 248 265 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 PRINTS Kinesin heavy chain signature 321 342 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 PRINTS Kinesin heavy chain signature 124 145 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 PRINTS Kinesin heavy chain signature 271 289 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 372 IPR027417 -
Cone15ag0172 776 Gene3D Kinesin motor domain 35 375 IPR036961 -
Cone15ag0172 776 MobiDBLite consensus disorder prediction 1 50 - -
Cone15ag0172 776 MobiDBLite consensus disorder prediction 1 18 - -
Cone15ag0172 776 ProSiteProfiles Kinesin motor domain profile. 52 372 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag0172 776 MobiDBLite consensus disorder prediction 28 44 - -
Cone15ag0172 776 Coils Coil 413 447 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0172 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0172 Cone-Chr15:827359 Cone4ag0340 Cone-Chr4:1565034 1.42E-177 dispersed
Cone14ag0161 Cone-Chr14:775053 Cone15ag0172 Cone-Chr15:827359 0 wgd
Cone15ag0172 Cone-Chr15:827359 Cone4ag0339 Cone-Chr4:1564155 9.47E-53 wgd
Cone15ag0172 Cone-Chr15:827359 Cone7ag0333 Cone-Chr7:1453998 9.18E-294 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g735 . . . . . Bpe14g01265 . . Cmo08g01050 Cmo17g00152 . . . . . . . . . . . . . . . . . . . . . Cone14ag0161 Cone15ag0172 . Cone4ag0340 . Csa02g01048 . . Blo02g00696 . . Bda13g00053 . . . . Sed09g0662 . . Cma08g01075 Cma17g00153 Car08g00947 Car17g00135 Cpe12g00130 Cpe17g00203 Bhi12g01600 Tan06g2394 Cmetu05g0124 . . . Lcy13g0389 . . . . . . . . . . Cme05g00583
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006035 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 5 2 1 1 1 1 1 1 1 1 2 1 1 39