Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0183 ATGGCGAGCGAGGTAGCGATGGAGGGGATAAGCGCTGCGGTGACGGCGGCCGGGGAAATTGAACCGGTGAAGTCGCAGAAGAAGCCTCACAAGCTGGAGAGGAAGTGGACGTTTTGGTTCGACAATCAGTCGAAGCCGAGGCAGCAAGGAGCAGTCTGGGGTTCCTCTCTTCGCAAAATTTACACATTTGACACTGTCGAAGAATTCTGGTGCTTGTATGATCAGATATTCAAGCCCAGCAAGCTACCTGGGAATGCAGATTTCCACTTGTTCAAAGCTGGGATCGAGCCAAAATGGGAAGATCCGGAATGTGCAAATGGAGGGAAATGGACCGTCCCAAGCAGTGGAAAGGCTAACCTCGAAAGCATGTGGCTCGATACGTTAATGGCGTTGATTGGCGAGCAATTTGATGAGGCTGATGTGATTTGCGGCGTGGTAGCGAGCGTCCGGCTTAAAAGACAGGACAAGCTTGCTCTTTGGACCAAATCAGCTGCTAATGAAGCTGTCCAGATGGGCATTGGAAGAAAGTGGAAAGAGATAATTGATGTCACTGACAAGATCACATACAGCTTCCATGATGATTCAAGAAGGACTTTGCCTTCAAAAGTTCGCTACAATGTCTGA 624 49.36 MASEVAMEGISAAVTAAGEIEPVKSQKKPHKLERKWTFWFDNQSKPRQQGAVWGSSLRKIYTFDTVEEFWCLYDQIFKPSKLPGNADFHLFKAGIEPKWEDPECANGGKWTVPSSGKANLESMWLDTLMALIGEQFDEADVICGVVASVRLKRQDKLALWTKSAANEAVQMGIGRKWKEIIDVTDKITYSFHDDSRRTLPSKVRYNV 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 874156 875740 - Conep15aG0018700.1 Cone15ag0183 453311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0183 207 Pfam Eukaryotic initiation factor 4E 31 188 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cone15ag0183 207 SUPERFAMILY eIF4e-like 23 196 IPR023398 -
Cone15ag0183 207 FunFam Eukaryotic translation initiation factor 4E 21 207 - -
Cone15ag0183 207 ProSitePatterns Eukaryotic initiation factor 4E signature. 87 110 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cone15ag0183 207 Gene3D RNA Cap, Translation Initiation Factor Eif4e 21 206 IPR023398 -
Cone15ag0183 207 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 24 197 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0183 Cone-Chr15:874156 Cone9ag0931 Cone-Chr9:4570020 2.19E-62 dispersed
Cone14ag0175 Cone-Chr14:814931 Cone15ag0183 Cone-Chr15:874156 3.41E-135 wgd
Cone15ag0183 Cone-Chr15:874156 Cone4ag0359 Cone-Chr4:1630709 3.28E-112 wgd
Cone15ag0183 Cone-Chr15:874156 Cone7ag0345 Cone-Chr7:1505292 1.72E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0183 K03259 - vvi:100259631 333.183