Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0263 ATGAATTTCTCCAATGAAGGCAGCTTAATCTATAACATCAAGGTATCATCTGTTGGTCCCGGTCGATTGACCGGCCAGGATGTAGTTCACTACCCAAGTGGTTTGGACTTGGCCATGAAGCTCCATTACCTTAAAGGAATCTACTTCTTTGGTAGCCAGACTGTAGAAGAACTTACAGTTACGAAAATTAAGGACTCTTTTTTCGACTTGCTCAATGACTACTATGTAGTATGTGGCCGGTTTCGGAGATCGGATTCTGGCCAGGCTTTCATTAAATGCAATGATTGTGGGGCCCGAATGTTCGAAGCCCGATGTCATAAGACTGTTGATGAGTGGCTTGAGATGAGAGATTGGGCTGCTCAGAGTCTTCTTGTTCCTCAACAAGTTCTTGGACCTGAACTGCAATTTTCCCCTCCTGTTCTCATACAAGTAACAAGGTTCAAATGTGGAGGGATGTCAATTGGCCTGAGCTGGGCCCATGTTCTTGGAGATTGGTTCTCAGTCTTTGATTTCATGAACAGGTGGGGTCAAATCATTTCTGGCATTCGGCCCAGAAAGCCCATCAATTACTCAAAATCAGGCCCAATAACTGAAATATCGAAAACCCAACCCACAACACCACAATCCTTGTACCGAGTCGACCCGGTCGGAGACCATTGGATCTCAACCCATAACTCCAAAATGGATACTTTTTCCTTCTACTTAACCCGAACCCAATTGACCCTTTTTCTCTCTGATCTCTCAAATGAAAAAGAAACAAACCAAATCCCAATTTTTGAATCAATTTGCGCCATTGTGTGGCAATGCATAGCCAAAGTCAGAAATGTACCCCACCCGAATATAGTGACCCTTTGCAAACGTGACCCGAATAAGCAAAAGGAATGGTGGATCAGCAATTATAATCAAACTATAAGCACAGTAGAAGCAGACTTCTCCATCAAAGAAGCAAGCCTAAAGAAGATAGCAATGTTGCTTGTTAATGGTGCTGTTGATGAGAGAGATAAGATTGAAGAGATTGTTGAGGAAGATAATGGAGTTTGTGATTTCATTATGTATGGATCTAAGTTGACTTTTGTTGACTTGGAGGAAGTTGATGTCTATGGATTGAGATTGAATGGACAAAAACCAAAGTTTGTGGAGTATAGCATTCAAGGTGTTGGGAACGAAGGAGTTGTTTTAGTAATTTCCGGTCCAGAAGTCTCCGAAAAGCACGGTGCGGTGAACGGGAAGTTTGTAACGTTGATCTTACCAGAAAATGAGGTGGTAGAGATGAGATCAGAGTTGGCAAAAAATAGTCTTATTGTTTAA 1308 42.13 MNFSNEGSLIYNIKVSSVGPGRLTGQDVVHYPSGLDLAMKLHYLKGIYFFGSQTVEELTVTKIKDSFFDLLNDYYVVCGRFRRSDSGQAFIKCNDCGARMFEARCHKTVDEWLEMRDWAAQSLLVPQQVLGPELQFSPPVLIQVTRFKCGGMSIGLSWAHVLGDWFSVFDFMNRWGQIISGIRPRKPINYSKSGPITEISKTQPTTPQSLYRVDPVGDHWISTHNSKMDTFSFYLTRTQLTLFLSDLSNEKETNQIPIFESICAIVWQCIAKVRNVPHPNIVTLCKRDPNKQKEWWISNYNQTISTVEADFSIKEASLKKIAMLLVNGAVDERDKIEEIVEEDNGVCDFIMYGSKLTFVDLEEVDVYGLRLNGQKPKFVEYSIQGVGNEGVVLVISGPEVSEKHGAVNGKFVTLILPENEVVEMRSELAKNSLIV 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1237860 1239816 - Conep15aG0026900.1 Cone15ag0263 453391

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0263 435 Pfam Transferase family 33 281 - -
Cone15ag0263 435 Gene3D - 11 211 IPR023213 -
Cone15ag0263 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 274 IPR050317 GO:0016747(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0263 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0263 Cone-Chr15:1237860 Cone7ag0861 Cone-Chr7:6592888 1.11E-89 dispersed
Cone15ag0263 Cone-Chr15:1237860 Cone4ag0420 Cone-Chr4:1909471 8.87E-166 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g929 . Blo12g00104 Bda03g01139 . Bpe04g01082 . Bma04g01163 . . . . . . . . . . . . . . . . . Cla06g00775 Cam06g0826 Cec06g0842 Cco06g0848 Clacu06g0829 Cmu06g0801 Cre06g1582 . Cone15ag0263 . . . . Chy05g00577 . . . . . . . . . Sed04g2086 . . . . . . . . Bhi12g01477 Tan06g2283 Cmetu05g0705 Lac12g2014 Hepe03g0377 . . . . . . . . . Lsi09g01123 . . Cme05g00735
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009078 1 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 34