Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0295 ATGGCTGGATTAGACTTAGGCTCAGCTTCTCGCTTTGTCCAGCAACTCCAGCAACGCCCCGACCTTCACCTTCAGAGACCGCCCGACCCCAATTCTGATGTCGAAAACCACAACCGCTTTGCCAGGGCGGAGCGCGACGATCACGATACCATCCATCAAGGGCTTGACCTTGTCTCCCCTAACCATGCCGGTTCAGGGGATATCACGAGCCGTCGGCCCAGAGGCCGACCGCCTGGCTCGAAGAACAAGGCCAAGCCCCCGGTCATCATAACTAGTGAGCAGGCAAACACCCTACGAGCTCATATCTTGGAGGTTTCCACGGGGTGTGATGTCTTTGAGTCGGTGGCTACATATGCTCGGAAGCGTCAACGTGGGATCTGTATCTTGAGCGGAAGTGGGACCGTGACCAACGTGAGCTTACGCCAGCCGGCAGCGGCTGGAGCCGTCGCTACATTACATGGAAGGTTTGAGATACTCTCGTTGTCAGGATCCTTTCTGCCGCCACCGGCCCCGCCCGGTGCCACCAGTCTAACAATATTTTTGGCAGGAGGGCAAGGTCAAGTTGTGGGGGGTAATGTTGTGGGTGCTTTGATTGCATCAGGGCCGGTCATAGTCATAGCTTCGTCCTTTACAAATGTTGCGTATGAAAGGTTACCATTAGATGAAGAGGAAGGTTTACAACAGGCAGTCTCACAGTCTTCTGGCGGCGGGGGCGGCGGTAGTGATGTTGGTGGAAACGGCCCATTTAGACCTGATCCATCATCAGGTCTACCATTTTTTAATTTGCCGTTAAACATGCCGAGTCAAAATCAATTACCGGTTGATGGGTGGGCTGGAAATTCAGGAGGTCAGCCTTCTTATTGA 864 53.82 MAGLDLGSASRFVQQLQQRPDLHLQRPPDPNSDVENHNRFARAERDDHDTIHQGLDLVSPNHAGSGDITSRRPRGRPPGSKNKAKPPVIITSEQANTLRAHILEVSTGCDVFESVATYARKRQRGICILSGSGTVTNVSLRQPAAAGAVATLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFTNVAYERLPLDEEEGLQQAVSQSSGGGGGGSDVGGNGPFRPDPSSGLPFFNLPLNMPSQNQLPVDGWAGNSGGQPSY 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1377333 1378196 + Conep15aG0030100.1 Cone15ag0295 453423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0295 287 ProSiteProfiles PPC domain profile profile. 95 232 IPR005175 -
Cone15ag0295 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 227 - -
Cone15ag0295 287 MobiDBLite consensus disorder prediction 224 287 - -
Cone15ag0295 287 MobiDBLite consensus disorder prediction 26 53 - -
Cone15ag0295 287 MobiDBLite consensus disorder prediction 16 86 - -
Cone15ag0295 287 FunFam AT-hook motif nuclear-localized protein 98 225 - -
Cone15ag0295 287 CDD DUF296 99 182 IPR005175 -
Cone15ag0295 287 Gene3D - 98 233 - -
Cone15ag0295 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 278 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone15ag0295 287 MobiDBLite consensus disorder prediction 261 287 - -
Cone15ag0295 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0295 Cone-Chr15:1377333 Cone7ag0452 Cone-Chr7:2047086 5.36E-143 dispersed
Cone14ag0277 Cone-Chr14:1262905 Cone15ag0295 Cone-Chr15:1377333 1.12E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0295 - - - 0.0