Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0295 | ATGGCTGGATTAGACTTAGGCTCAGCTTCTCGCTTTGTCCAGCAACTCCAGCAACGCCCCGACCTTCACCTTCAGAGACCGCCCGACCCCAATTCTGATGTCGAAAACCACAACCGCTTTGCCAGGGCGGAGCGCGACGATCACGATACCATCCATCAAGGGCTTGACCTTGTCTCCCCTAACCATGCCGGTTCAGGGGATATCACGAGCCGTCGGCCCAGAGGCCGACCGCCTGGCTCGAAGAACAAGGCCAAGCCCCCGGTCATCATAACTAGTGAGCAGGCAAACACCCTACGAGCTCATATCTTGGAGGTTTCCACGGGGTGTGATGTCTTTGAGTCGGTGGCTACATATGCTCGGAAGCGTCAACGTGGGATCTGTATCTTGAGCGGAAGTGGGACCGTGACCAACGTGAGCTTACGCCAGCCGGCAGCGGCTGGAGCCGTCGCTACATTACATGGAAGGTTTGAGATACTCTCGTTGTCAGGATCCTTTCTGCCGCCACCGGCCCCGCCCGGTGCCACCAGTCTAACAATATTTTTGGCAGGAGGGCAAGGTCAAGTTGTGGGGGGTAATGTTGTGGGTGCTTTGATTGCATCAGGGCCGGTCATAGTCATAGCTTCGTCCTTTACAAATGTTGCGTATGAAAGGTTACCATTAGATGAAGAGGAAGGTTTACAACAGGCAGTCTCACAGTCTTCTGGCGGCGGGGGCGGCGGTAGTGATGTTGGTGGAAACGGCCCATTTAGACCTGATCCATCATCAGGTCTACCATTTTTTAATTTGCCGTTAAACATGCCGAGTCAAAATCAATTACCGGTTGATGGGTGGGCTGGAAATTCAGGAGGTCAGCCTTCTTATTGA | 864 | 53.82 | MAGLDLGSASRFVQQLQQRPDLHLQRPPDPNSDVENHNRFARAERDDHDTIHQGLDLVSPNHAGSGDITSRRPRGRPPGSKNKAKPPVIITSEQANTLRAHILEVSTGCDVFESVATYARKRQRGICILSGSGTVTNVSLRQPAAAGAVATLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFTNVAYERLPLDEEEGLQQAVSQSSGGGGGGSDVGGNGPFRPDPSSGLPFFNLPLNMPSQNQLPVDGWAGNSGGQPSY | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1377333 | 1378196 | + | Conep15aG0030100.1 | Cone15ag0295 | 453423 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0295 | 287 | ProSiteProfiles | PPC domain profile profile. | 95 | 232 | IPR005175 | - | |
Cone15ag0295 | 287 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 94 | 227 | - | - | |
Cone15ag0295 | 287 | MobiDBLite | consensus disorder prediction | 224 | 287 | - | - | |
Cone15ag0295 | 287 | MobiDBLite | consensus disorder prediction | 26 | 53 | - | - | |
Cone15ag0295 | 287 | MobiDBLite | consensus disorder prediction | 16 | 86 | - | - | |
Cone15ag0295 | 287 | FunFam | AT-hook motif nuclear-localized protein | 98 | 225 | - | - | |
Cone15ag0295 | 287 | CDD | DUF296 | 99 | 182 | IPR005175 | - | |
Cone15ag0295 | 287 | Gene3D | - | 98 | 233 | - | - | |
Cone15ag0295 | 287 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 46 | 278 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone15ag0295 | 287 | MobiDBLite | consensus disorder prediction | 261 | 287 | - | - | |
Cone15ag0295 | 287 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 211 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0295 | Cone-Chr15:1377333 | Cone7ag0452 | Cone-Chr7:2047086 | 5.36E-143 | dispersed | |
Cone14ag0277 | Cone-Chr14:1262905 | Cone15ag0295 | Cone-Chr15:1377333 | 1.12E-185 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0295 | - | - | - | 0.0 |