Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0298 | ATGTTTGGAAACCCTAGTGTAATCGTTACGACGCCGGAAATGTGCAAGAGAGTTCTGACGGATGACGCGTTGTTTCAACAAGGTTGGCCTCATTCCACCATGCAACTCATCGGAAGAAAGTCGTTCATCGGAATCTCTGACCAAGAGCACAAGCGGCTCCGCCGTTTGACCGCTGCTCCGGTAAATGGCTACGAAGCTTTTAACACGTACATGAAGTATATTGAAGAAAATGTTACAACCTCCTTAGAAAAGTGGTCTAAGTTAGGAGAGCTGGAGTTCTTAACTGAACTACGCAAGCTTACTTTTAGGATTATCATGTTCATCTTTCTTAGCTCGGAGAGTGAGCCAGTTATGGAAGCCTTAGAGAGGGAGTATACAAAGCTTAACTACGGTGTTAGAGCCATGGCTGTTAATATTCCGGGATTCGCATACCACAAAGCACTTAAGGCGAGGAGAAATCTTGTGGCTATGTTTCAATCCATTGTCGATGAGAGAAGAAGACAGAAAAAGGAGATCTTGTCGACCCCGAAGAAGAGAGACATGATGGATGCCCTAATGGATGTTGAGGATGAAAATGGAAGAAAGCTAAGTGATGAAGAAATCATTGATATTCTAGTAATGTACTTGAATGCAGGCCATGAATCATCTGGCCATACTATGATGTGGGCCACCCTTTTCTTACAAGGACATCCTGAAATTTTCCAAAAAGCTAAGGCAGAGCAAGAGGAGATTGTAAAGAAAAGGCCTAAAACACAGAAGGGGTTAACACTAAAGGAAGTTAGAGAAATGGAGTATCTTTCTAAGGTGATAGATGAAACACTTCGCGTCGTAACATTCTCACTCGTCGTCTTCCGAGAGGCAAAATCCGATATCAGCTTAGGCGGTTACACAATTCCGAAGGGATGGAAAGTTCTTGTCTGGTTTAGAAGTGTTCATTTAGATCCAGAAATCTATCCAAATCCAAAGGAATTCAATCCTTCCAGATGGGATGATCATACACCAAAAGCAGGAACATTTCTTCCATTTGGAGCAGGAAGTAGGATGTGCCCGGGAAATGATCTAGCAAAGCTGGAAATCTCTATATTTCTTCACTACTTTCTCCTTAATTACCAATTGGAGAGGGTGAATCCTGGATGCGCAACTAGGTACTTGCCACATCCGAGACTAAAAGATAACTGTCTAGGTAAAATCAAGCGAAATAGCTCATCCTCTACCTCTTCACTTGATTGA | 1230 | 42.52 | MFGNPSVIVTTPEMCKRVLTDDALFQQGWPHSTMQLIGRKSFIGISDQEHKRLRRLTAAPVNGYEAFNTYMKYIEENVTTSLEKWSKLGELEFLTELRKLTFRIIMFIFLSSESEPVMEALEREYTKLNYGVRAMAVNIPGFAYHKALKARRNLVAMFQSIVDERRRQKKEILSTPKKRDMMDALMDVEDENGRKLSDEEIIDILVMYLNAGHESSGHTMMWATLFLQGHPEIFQKAKAEQEEIVKKRPKTQKGLTLKEVREMEYLSKVIDETLRVVTFSLVVFREAKSDISLGGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPSRWDDHTPKAGTFLPFGAGSRMCPGNDLAKLEISIFLHYFLLNYQLERVNPGCATRYLPHPRLKDNCLGKIKRNSSSSTSSLD | 409 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 1388286 | 1396379 | - | Conep15aG0030400.1 | Cone15ag0298 | 453426 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0298 | 409 | SUPERFAMILY | Cytochrome P450 | 1 | 378 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | E-class P450 group I signature | 339 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | E-class P450 group I signature | 307 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | E-class P450 group I signature | 220 | 246 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | E-class P450 group I signature | 349 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | Pfam | Cytochrome P450 | 3 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 342 | 351 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone15ag0298 | 409 | PANTHER | CYTOCHROME P450 26 | 1 | 375 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Cone15ag0298 | 409 | FunFam | Ent-kaurenoic acid oxidase | 1 | 400 | - | - | |
| Cone15ag0298 | 409 | CDD | CYP90-like | 1 | 399 | - | - | |
| Cone15ag0298 | 409 | Gene3D | Cytochrome P450 | 1 | 400 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | P450 superfamily signature | 340 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | P450 superfamily signature | 268 | 279 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0298 | 409 | PRINTS | P450 superfamily signature | 211 | 228 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0599 | Cone-Chr12:5311371 | Cone15ag0298 | Cone-Chr15:1388286 | 3.67E-147 | dispersed | |
| Cone15ag0298 | Cone-Chr15:1388286 | Cone2ag0861 | Cone-Chr2:34577494 | 4.18E-90 | dispersed | |
| Cone14ag0278 | Cone-Chr14:1274806 | Cone15ag0298 | Cone-Chr15:1388286 | 5.37E-290 | wgd | |
| Cone15ag0298 | Cone-Chr15:1388286 | Cone4ag0461 | Cone-Chr4:2046340 | 1.18E-223 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0298 | K04123 | - | cit:102629702 | 654.44 |