Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0319 ATGAGTGGCGGGGAAGGAGAAGGGGTATCGCTGGAGTACACTCCGACATGGGTTGTTGCTCTAGTCTGTACTGTGATCGTCGCCATTTCTCTCGCTATGGAACGTCTCCTTCACTATGCTGGTAAATATCTCAAGAAGAAGGGCCAGAACTCCCTTTTCGAAGCCTTACAGAAGATCAAAGAAGAATTGATGCTTTTGGGATTCATATCTCTGCTCCTCACTGTTTTCCAAACCACCATTTCGAAAATCTGTGTTCCTTCGGATTTGACCCGCCATATGCTTCCATGCACGTTGCATTCTGAAGAATCGGAGAGTCCTTCTTCAGCAGATTCTTCCGAGACCACCCATATTCAGCGATTCTTTTCTTCATCTATTTCTGGTAATATTTCTGGTAATAATGTTAGACATCTTTTGGCTGAGAGTTCTTCTACAGAGGGTTACTGTGCTAAAAAGGGCAAGGTACCATTACTATCACTGGAAGGGTTGCACCATCTTCATATCTTCATCTTCATTCTAGCCATTGTCCATGTCACCTTTTGTGCACTCACTGTTCTATTTGGAGGAGCTAAGATCCGTCAGTGGAAACGATGGGAGGATTCTGTAGCAAAGCAGAATTATGATACAAAACAAGCTCTAAAATCAAAGGTGACCCATGTTCAACAACATGATTTTATTAGGGAACATTTCCGGGGAATTGGTAAAAACTCTGTCATTCTCGGTTGGGCGCGGTCATTTCTCAAACAATTTTATGCTTCTGTAACGAAATCGGATTACATAACATTGCGATTAGGTTTCATCATGACTCATTGCAGAACAAACCCCAAGTTTAATTTCCACAAGTACATGTTACGTGCTCTTGAAGATGATTTCAAGAAAGTTGTCGGTATAAGTTGGTACCTCTGGATATTTGTGGTTGTCTTCTTGTTGCTTAATGTACACGGATGGCATACATACTTCTGGATAGCATTCATTCCTTTCATTCTTCTACTTGCCGTGGGGACTAAGCTTGAACATATTATCATCCAATTAGCAAATGAGGTTGCAGAGAGACATGTAGCAATTGAAGGCGAATTGGTTGTACAACCATCTGATGATCATTTCTGGTTTGGTCGGCCCCGCATTGTCCTCTTCCTGATCCACTTCATACTTTTTCAGAATGCTTTCGAGATCGCATTTTTCTTTTGGATATTGTTTCAGTATGGCTTCGATTCATGCATTATGGGACAAGTCCGATATATCGTTCCGCGGCTTATCATTGGGGTGGTCATTCAGGTACTTTGTAGCTATAGCACGCTGCCACTCTATGCTATTGTCACACAGATGGGAACTTCATTCAAGAAAGCAATATTCCAAGATCATATACAAGTAGGCCTCGTCGGTTGGGCCCAGAAAGCGAAGAAACATAAGGGACTCAGAGCAGATCCAGATGACTCAACCCAAGGAGGTAGCAAAGACAGTTCCGGTGCTGGTGCTGGATCCGGTTCCAGTGCCGGGATTCATCTGGGAAACATCATGCGAAGGACATCTAACCCGGAGGAGATTCAGCCGAAACAGGACCCGGAAGATCCTAAATGA 1575 43.37 MSGGEGEGVSLEYTPTWVVALVCTVIVAISLAMERLLHYAGKYLKKKGQNSLFEALQKIKEELMLLGFISLLLTVFQTTISKICVPSDLTRHMLPCTLHSEESESPSSADSSETTHIQRFFSSSISGNISGNNVRHLLAESSSTEGYCAKKGKVPLLSLEGLHHLHIFIFILAIVHVTFCALTVLFGGAKIRQWKRWEDSVAKQNYDTKQALKSKVTHVQQHDFIREHFRGIGKNSVILGWARSFLKQFYASVTKSDYITLRLGFIMTHCRTNPKFNFHKYMLRALEDDFKKVVGISWYLWIFVVVFLLLNVHGWHTYFWIAFIPFILLLAVGTKLEHIIIQLANEVAERHVAIEGELVVQPSDDHFWFGRPRIVLFLIHFILFQNAFEIAFFFWILFQYGFDSCIMGQVRYIVPRLIIGVVIQVLCSYSTLPLYAIVTQMGTSFKKAIFQDHIQVGLVGWAQKAKKHKGLRADPDDSTQGGSKDSSGAGAGSGSSAGIHLGNIMRRTSNPEEIQPKQDPEDPK 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1458527 1461855 - Conep15aG0032500.1 Cone15ag0319 453447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0319 524 Pfam Mlo family 10 486 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cone15ag0319 524 MobiDBLite consensus disorder prediction 470 524 - -
Cone15ag0319 524 PANTHER MLO-LIKE PROTEIN 1 1 484 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0794 Cone-Chr12:7276419 Cone15ag0319 Cone-Chr15:1458527 3.58E-239 dispersed
Cone15ag0319 Cone-Chr15:1458527 Cone4ag2032 Cone-Chr4:14113354 4.04E-127 dispersed
Cone19ag0700 Cone-Chr19:5846312 Cone15ag0319 Cone-Chr15:1458527 9.70E-56 transposed
Cone14ag0294 Cone-Chr14:1343657 Cone15ag0319 Cone-Chr15:1458527 1.23e-319 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0319 K08472 - csv:101211868 760.37