Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0321 ATGGACACTTGTCGAACTGGGTTCATTGGGATCAGAGTTACCGACAACATCTTGCCGTTATTGTCATTGGATAGCATTTCGGATTTAATTAGCAACACTCTTGCTATTAACAAATTATCAGCACATAGTAATTCTCGAGTCAATAACCATGATGATTTGCCAACTTGGGTCAAGCCCAGGGATCGGAAGCTCTTGCAATCTTCTGTTGATTCAAATCTTGTGGTGGCCCAAGATGCGTCTGGGGTTTATGAGACGATTATGGAGGCTATTTCTTCCGCTTCCGAGCGGTCCAGTGGCAGGTTTGTTATATATGTTAAGGCAGGGTTGTACAAAGAAAATATTGAGATAAAGTCACATAATATCATGTTGGTTGGTGATGGTATGGGGAAGACGATTATAACGGGAAGTAGAAGTTTTGGTGGCGCTATTATTGGAGATGGATTTATAGCTCGAGACATAACATTTAGAAACACGGCCGGAGGATCAAATCATCAAGCCGTGGCTCTCCTTTCACAATCCGATCATTCAGTGTTCTATAGGTGCAGTTTCGAAGGATACCAAGACACTCTCTATGTCTTTTCCAACAGACAATTTCACAAAGACTGCAACATTTAG 615 41.79 MDTCRTGFIGIRVTDNILPLLSLDSISDLISNTLAINKLSAHSNSRVNNHDDLPTWVKPRDRKLLQSSVDSNLVVAQDASGVYETIMEAISSASERSSGRFVIYVKAGLYKENIEIKSHNIMLVGDGMGKTIITGSRSFGGAIIGDGFIARDITFRNTAGGSNHQAVALLSQSDHSVFYRCSFEGYQDTLYVFSNRQFHKDCNI 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1465626 1466350 - Conep15aG0032700.1 Cone15ag0321 453449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0321 204 PANTHER PECTINESTERASE 2 204 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone15ag0321 204 Gene3D - 66 204 IPR012334 -
Cone15ag0321 204 Pfam Pectinesterase 72 204 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone15ag0321 204 SUPERFAMILY Pectin lyase-like 70 204 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0321 Cone-Chr15:1465626 Cone4ag0485 Cone-Chr4:2163415 1.16E-80 dispersed
Cone14ag0296 Cone-Chr14:1350625 Cone15ag0321 Cone-Chr15:1465626 2.72E-105 wgd
Cone15ag0321 Cone-Chr15:1465626 Cone4ag0484 Cone-Chr4:2157022 1.29E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0321 K01051 - gmx:100819641 228.794