Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag0333 ATGGAAGCAAGAGAAGGGATGAATTCAGGGGTTAGAGTAATAGGAGCAGAAGCTCCATCAGCCTATCACATGGCTCCAAGAGCTGAGAACCCAAGCCAGGGTGGTGGTGGGCCCCCATCTATGATGACCTCACCCATTGCCGTTGGATCAGGTGGATCAGTGGAGAAAAAAAAGCGTGGTAGACCGAGAAAGTATGGACCTGATGGCTCTGTAACATTTTCTACACCCCCCGTTTCATCAAGTGGATTATCATCATCTGGTGCGAAGCGAGGAAGGGGCAGGTCAAGTGGTTTGGATTATAAGCAGTACAAGAAAACGGGAATGGATTATATAGGTGATCTGAATGGATGTTCCGTGGGTACAAGCTTTATGCCCCATATCATTTCCGTTAATGCTGGTGAGGATGTGACGGTGAAAGTGATATCGTTTTCTCAACAAGGACCTCGAGCCGTTTGTATCCTATCAGCTAGTGGCATGATTTCTAATGTTACGGTCCGTCAACATGATTCTTCTGGGGGAACTCTAACTTATGAGGGCCGTTTTGATATATTATCTTTGTCTGGATCATTTGTGCCTGTGGAGAGTCAAGGATCAAGGAACCGGTCTGGTAGCTTGAATGTCTCTCTTTCAAGCCCTGATGGTCGTGTTATAGGAGGCGTTGTAGCTGGACTACTTATTGCTGCTACTCCCGTCCAGGTTGTGGTGGGAAGCTTTCTACCAAGCACCGAGCCAGAGCATAAACCAAAGAAACTGAAGACCAAGTCTCCTCTGCCACGACCCCCTACCTTACACACTTCCACGCCGGCTTCTGGCCCTGACCATGATGATGGACCGGTTGGTCATAGCCCGCAAAATCAAGGGGCCCAAAAGTCTTACTTTGCTACATCCTCTTCATTCCGGAGGGAAAACTATACTACCATGCACTCTTTGGAGGATTCAAGAAACACGGCTACTGACATCAACATATCTTTGCCTGGTGGGTTAAATTAG 990 47.78 MEAREGMNSGVRVIGAEAPSAYHMAPRAENPSQGGGGPPSMMTSPIAVGSGGSVEKKKRGRPRKYGPDGSVTFSTPPVSSSGLSSSGAKRGRGRSSGLDYKQYKKTGMDYIGDLNGCSVGTSFMPHIISVNAGEDVTVKVISFSQQGPRAVCILSASGMISNVTVRQHDSSGGTLTYEGRFDILSLSGSFVPVESQGSRNRSGSLNVSLSSPDGRVIGGVVAGLLIAATPVQVVVGSFLPSTEPEHKPKKLKTKSPLPRPPTLHTSTPASGPDHDDGPVGHSPQNQGAQKSYFATSSSFRRENYTTMHSLEDSRNTATDINISLPGGLN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1527904 1531108 - Conep15aG0034000.1 Cone15ag0333 453461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag0333 329 MobiDBLite consensus disorder prediction 282 298 - -
Cone15ag0333 329 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 238 IPR005175 -
Cone15ag0333 329 MobiDBLite consensus disorder prediction 22 99 - -
Cone15ag0333 329 MobiDBLite consensus disorder prediction 240 298 - -
Cone15ag0333 329 ProSiteProfiles PPC domain profile profile. 120 259 IPR005175 -
Cone15ag0333 329 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 242 - -
Cone15ag0333 329 CDD DUF296 125 238 IPR005175 -
Cone15ag0333 329 Gene3D - 125 255 - -
Cone15ag0333 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 286 IPR039605 GO:0003680(InterPro)
Cone15ag0333 329 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0333 Cone-Chr15:1527904 Cone8ag0357 Cone-Chr8:2067946 9.86E-92 dispersed
Cone15ag0333 Cone-Chr15:1527904 Cone15ag0335 Cone-Chr15:1556311 1.30E-17 proximal
Cone11ag0388 Cone-Chr11:1912189 Cone15ag0333 Cone-Chr15:1527904 1.24E-17 wgd
Cone14ag0306 Cone-Chr14:1406920 Cone15ag0333 Cone-Chr15:1527904 6.77E-207 wgd
Cone14ag0141 Cone-Chr14:683830 Cone15ag0333 Cone-Chr15:1527904 8.09E-18 wgd
Cone15ag0149 Cone-Chr15:720428 Cone15ag0333 Cone-Chr15:1527904 1.34E-17 wgd
Cone15ag0333 Cone-Chr15:1527904 Cone18ag1132 Cone-Chr18:8173667 5.13E-18 wgd
Cone15ag0333 Cone-Chr15:1527904 Cone8ag0353 Cone-Chr8:2019529 1.21E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag0333 - - - 0.0