Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag0335 | ATGGACGGCCGATCTCTCCCCCCTCACTTCCTCTCTAAAGACCTCCAGCTCCACCCCGGCCACCACCAATTCTTCCACCACCACCATCAACAGCGACAAAACTCCGAAGAAGATGACCATGGTCAACAACAACAAAACCGCCGCCAAAACCGAGATCGAGAAGAAGAAGAAGAAAACGGTCAAAACATGAACCTCATGATCAACAACACAACAGATCAATTAGCAGGCAGTACAACAAGTACTGGAGGAGGAGGAGGAGATCATGATCATGATCATCATAATCAGTCTGATCAAATCACAAGAAGGCCCAGAGGGAGGCCCGCTGGGTCGAAAAACAAGCCCAAACCACCGATCATCATAACCAGAGACAGCGCAAATGCACTCCGGTCCCATGTAATGGAAATCGCAACTGGCTGTGACATCATCGAGAGTGTTACGGTCTTTGCTCGGAGAAGGCAAAGAGGAGTTAGTATATTGAGCGGAAGCGGAACCGTCACTAACGTTACTCTAAAACAACCTGCTTCAGTAGGTGCAATTGTCACTTTACATGGTAGATTCGAGATTTTATCGCTTTCCGGATCGTTTTTGCCCCCTCCAGCCCCACCCGCAGCTTCTGGTTTGACTATATATTTGGCTGGTGGACAAGGTCAGGTGGTCGGAGGGAGTGTGGTGGGCCCGCTTTTGGCGTCGGGGCCAGTGGTTATCATGGCAGCTTCTTTTGGTAATGCAGCGTATGAAAGATTGCCGCTAGTTGAGGATGAGGAGGTTGCAGAAGGGGTTCCGGAAAGTACTACTCGGCCTATCGGGTCGCCCGGAGTTGTTGGATCGGGCCCACAACAGCAGCAGCAGCAACAGCAACAATTTATGACGGATCATACCACATCACCTTTGTTTCATGGGATGCCGCAAAATCTTCTAAATTCATGTCAATTTCCTAATGACGGTTACTGGGGAGGAATAGGCCGTCCAGCTTTCTGA | 978 | 49.9 | MDGRSLPPHFLSKDLQLHPGHHQFFHHHHQQRQNSEEDDHGQQQQNRRQNRDREEEEENGQNMNLMINNTTDQLAGSTTSTGGGGGDHDHDHHNQSDQITRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIATGCDIIESVTVFARRRQRGVSILSGSGTVTNVTLKQPASVGAIVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLVEDEEVAEGVPESTTRPIGSPGVVGSGPQQQQQQQQQFMTDHTTSPLFHGMPQNLLNSCQFPNDGYWGGIGRPAF | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1556311 | 1557288 | + | Conep15aG0034200.1 | Cone15ag0335 | 453463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag0335 | 325 | MobiDBLite | consensus disorder prediction | 85 | 100 | - | - | |
Cone15ag0335 | 325 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 125 | 250 | - | - | |
Cone15ag0335 | 325 | MobiDBLite | consensus disorder prediction | 29 | 59 | - | - | |
Cone15ag0335 | 325 | ProSiteProfiles | PPC domain profile profile. | 125 | 264 | IPR005175 | - | |
Cone15ag0335 | 325 | FunFam | AT-hook motif nuclear-localized protein | 128 | 255 | - | - | |
Cone15ag0335 | 325 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 57 | 314 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone15ag0335 | 325 | MobiDBLite | consensus disorder prediction | 259 | 286 | - | - | |
Cone15ag0335 | 325 | PIRSF | ESCAROLA | 12 | 323 | IPR014476 | GO:0003680(InterPro) | |
Cone15ag0335 | 325 | MobiDBLite | consensus disorder prediction | 73 | 119 | - | - | |
Cone15ag0335 | 325 | CDD | DUF296 | 129 | 196 | IPR005175 | - | |
Cone15ag0335 | 325 | MobiDBLite | consensus disorder prediction | 25 | 59 | - | - | |
Cone15ag0335 | 325 | Gene3D | - | 128 | 256 | - | - | |
Cone15ag0335 | 325 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 129 | 240 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0309 | Cone-Chr14:1438102 | Cone15ag0335 | Cone-Chr15:1556311 | 1.26E-160 | dispersed | |
Cone15ag0335 | Cone-Chr15:1556311 | Cone8ag0353 | Cone-Chr8:2019529 | 7.98E-99 | dispersed | |
Cone15ag0333 | Cone-Chr15:1527904 | Cone15ag0335 | Cone-Chr15:1556311 | 1.30E-17 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag0335 | - | - | - | 0.0 |