Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag0338 | ATGGCTATGATCATCTTCATCCTCTTAACCTTGATATCAATCACACTCCTCTTCCTCATCACCTTCTTCATCATCCTCGTACTAAGAACCTACACCGGAAAATCCATAACCAACCCAGAATACGCACCTCTAAACGGCACCGTTTTCCACCAACTACTCTACTTCACCAACCTCTACGATTACCAAACCCAAGTGGCCAAAAAGACACCAACTTTCCGCCTCATCTCCCCCACAGAAAGCGAAATATACACAACTGACCCCAGAAACATTGAACATGTTCTAAAGACCAAGTTCGATAAGTACTCTAAAGGCAGGCACGATCAAGAGATCGTCGAGGATCTTTTCGGTGAGGGAATATTCGTCGTCAATGGAGATAAATGGCGCCAACAGAGAAAGCTTGCTAGCTTTGAGTTTTCCACTAGGGTTCTTCGAGATTTTAGCTGCTCCGTTTTCAGAACAAATGGTGCTAAACTTGTTAGAGTTGTCTCAAAATTTGTGGGTGCTAATCAAGCTTTTGATATGCAAGATTTGCTAATGAGATGCACTTTGGATTCAATATTCAAAGTTGGGTTTGGGGTGGACTTGAATTGCTTGGAGAAATCAAGTAAAGAAGGGAGTCAATTTATGGAAGCTTTTGATGAAGCGAGTGCTTTAACCTATTGGCGATATGTCGATCCCTTTTGGAAATTGAAACGAATGCTTAACATCGGATCCGAAGCCTCCCTGAGAAGGTACATTCGAGTTATTGACAGTTTCGTTCACCAAGTAATCAAGAAGAAGAGAGAATTGCTAGATCAAGAAAGATCTTGTGATGATAAGGAGGATATACTTTCGAGGTTTTTAATGGAGAGCAAGAAGGAGCCAGAGAAAATGAATGATAAGTATCTAAGAGATATAATCTTGAATTTCATGATTGCCGGAAAAGATACCAGTGCAACGACGCTATCATGGTTCTTCTACATGCTTTGTAAGAACCCTCTTATACAAGAAAAGGTTGCTCAAGAAGTTAGAGACAACATTGTCGGAGTTGACGATCCAGAAGAAGATGATGAAGTTGATCCGAATGCATTCATGGATAAAATAACCGATGCAAATCTCGAGAAAATGCATTATCTTCACGCTGCATTGACCGAAACCTTGAGGCTATACCCTGCAGTTCCAATAGATGGGAGGTCAGCAGAGATAGATGACATTCTACCTGATGGCTATAAGCTGAAAAAAAGGGATGCAGTATTCTACTTGGCCTATTCAATGGGTAGGATGACTAACATCTGGGGAGAAGACGCTGAAGATTTTCAGCCCGAAAGATGGCTGCAGAATGGAATTTTCCAACCCGAGTCGCCTTTCAAATTCATCTCGTTTCATGCGGGGCCTCGTATTTGCCTGGGGAAAGACTTTGCTTACAGGCAAATGAAGATCGTATCCATTGCTCTTCTTCAATTTTTCCGCTTCAAATTAGCCGATGCAGCGAAAAAGGTGACTTATAGGACCATGTTTACTCTTCACATTGATGGAGGCCTTTCTCTTACTGCAGTTCCAAGGAGACGGCCCCGTGAACATATCTAG | 1566 | 42.08 | MAMIIFILLTLISITLLFLITFFIILVLRTYTGKSITNPEYAPLNGTVFHQLLYFTNLYDYQTQVAKKTPTFRLISPTESEIYTTDPRNIEHVLKTKFDKYSKGRHDQEIVEDLFGEGIFVVNGDKWRQQRKLASFEFSTRVLRDFSCSVFRTNGAKLVRVVSKFVGANQAFDMQDLLMRCTLDSIFKVGFGVDLNCLEKSSKEGSQFMEAFDEASALTYWRYVDPFWKLKRMLNIGSEASLRRYIRVIDSFVHQVIKKKRELLDQERSCDDKEDILSRFLMESKKEPEKMNDKYLRDIILNFMIAGKDTSATTLSWFFYMLCKNPLIQEKVAQEVRDNIVGVDDPEEDDEVDPNAFMDKITDANLEKMHYLHAALTETLRLYPAVPIDGRSAEIDDILPDGYKLKKRDAVFYLAYSMGRMTNIWGEDAEDFQPERWLQNGIFQPESPFKFISFHAGPRICLGKDFAYRQMKIVSIALLQFFRFKLADAAKKVTYRTMFTLHIDGGLSLTAVPRRRPREHI | 521 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 1571625 | 1573714 | + | Conep15aG0034500.1 | Cone15ag0338 | 453466 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag0338 | 521 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | Pfam | Cytochrome P450 | 42 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | SUPERFAMILY | Cytochrome P450 | 36 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone15ag0338 | 521 | CDD | CYP86A | 70 | 507 | - | - | |
| Cone15ag0338 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone15ag0338 | 521 | PANTHER | CYTOCHROME P450 | 21 | 507 | - | - | |
| Cone15ag0338 | 521 | Gene3D | Cytochrome P450 | 34 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag0378 | Cone-Chr11:1865929 | Cone15ag0338 | Cone-Chr15:1571625 | 3.23E-182 | dispersed | |
| Cone15ag0338 | Cone-Chr15:1571625 | Cone6ag0571 | Cone-Chr6:2796642 | 8.42E-131 | dispersed | |
| Cone15ag0338 | Cone-Chr15:1571625 | Cone18ag1124 | Cone-Chr18:8146734 | 3.27E-67 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag0338 | - | - | - | 0.0 |